Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 SCAND3P1-201ENST00000439854 1060 ntBASIC5.61□□□□□ -1.51
ABCD3P28288 AMYP1-201ENST00000440059 1023 ntBASIC5.61□□□□□ -1.51
ABCD3P28288 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.61□□□□□ -1.51
ABCD3P28288 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.61□□□□□ -1.51
ABCD3P28288 RPL23AP60-201ENST00000450011 454 ntBASIC5.61□□□□□ -1.51
ABCD3P28288 AC068228.1-201ENST00000461723 211 ntBASIC5.61□□□□□ -1.51
ABCD3P28288 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.61□□□□□ -1.51
ABCD3P28288 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.61□□□□□ -1.51
ABCD3P28288 MTCO2P9-201ENST00000503214 694 ntBASIC5.61□□□□□ -1.51
ABCD3P28288 AC093763.2-201ENST00000505334 1223 ntBASIC5.61□□□□□ -1.51
ABCD3P28288 AC016550.1-201ENST00000505348 785 ntBASIC5.61□□□□□ -1.51
ABCD3P28288 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
ABCD3P28288 AC093225.1-201ENST00000506867 1408 ntBASIC5.61□□□□□ -1.51
ABCD3P28288 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.61□□□□□ -1.51
ABCD3P28288 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.61□□□□□ -1.51
ABCD3P28288 RNU6-1308P-201ENST00000516817 103 ntBASIC5.61□□□□□ -1.51
ABCD3P28288 AC008627.1-201ENST00000517511 1704 ntBASIC5.61□□□□□ -1.51
ABCD3P28288 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.61□□□□□ -1.51
ABCD3P28288 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.61□□□□□ -1.51
ABCD3P28288 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
ABCD3P28288 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.61□□□□□ -1.51
ABCD3P28288 AC090651.1-201ENST00000567865 634 ntBASIC5.61□□□□□ -1.51
ABCD3P28288 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.61□□□□□ -1.51
ABCD3P28288 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.61□□□□□ -1.51
ABCD3P28288 AC005776.1-201ENST00000603164 290 ntBASIC5.61□□□□□ -1.51
ABCD3P28288 AC027334.1-201ENST00000603257 310 ntBASIC5.61□□□□□ -1.51
ABCD3P28288 SUMO2P14-201ENST00000604488 293 ntBASIC5.61□□□□□ -1.51
ABCD3P28288 AC096861.1-201ENST00000616652 240 ntBASIC5.61□□□□□ -1.51
ABCD3P28288 AC074140.1-201ENST00000621617 208 ntBASIC5.61□□□□□ -1.51
ABCD3P28288 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC5.61□□□□□ -1.51
ABCD3P28288 AC073488.3-201ENST00000631611 778 ntBASIC5.61□□□□□ -1.51
ABCD3P28288 AC119674.1-212ENST00000641155 993 ntBASIC5.61□□□□□ -1.51
ABCD3P28288 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
ABCD3P28288 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
ABCD3P28288 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
ABCD3P28288 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
ABCD3P28288 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
ABCD3P28288 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.61□□□□□ -1.51
ABCD3P28288 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.6□□□□□ -1.51
ABCD3P28288 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ABCD3P28288 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.6□□□□□ -1.51
ABCD3P28288 NXF4-202ENST00000416098 1465 ntBASIC5.6□□□□□ -1.51
ABCD3P28288 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.6□□□□□ -1.51
ABCD3P28288 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ABCD3P28288 MFSD8-219ENST00000641228 2559 ntBASIC5.6□□□□□ -1.51
ABCD3P28288 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ABCD3P28288 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ABCD3P28288 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ABCD3P28288 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC5.6□□□□□ -1.51
ABCD3P28288 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.6□□□□□ -1.51
ABCD3P28288 RNU4-31P-201ENST00000384211 141 ntBASIC5.6□□□□□ -1.51
ABCD3P28288 MIR130B-202ENST00000385018 82 ntBASIC5.6□□□□□ -1.51
ABCD3P28288 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ABCD3P28288 RNU2-17P-201ENST00000410290 190 ntBASIC5.6□□□□□ -1.51
ABCD3P28288 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.6□□□□□ -1.51
ABCD3P28288 AC021876.1-201ENST00000425959 359 ntBASIC5.6□□□□□ -1.51
ABCD3P28288 BX119904.1-201ENST00000432026 348 ntBASIC5.6□□□□□ -1.51
ABCD3P28288 AC069154.1-201ENST00000432914 542 ntBASIC5.6□□□□□ -1.51
ABCD3P28288 CACYBPP1-201ENST00000438592 684 ntBASIC5.6□□□□□ -1.51
ABCD3P28288 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.6□□□□□ -1.51
ABCD3P28288 AC016027.4-201ENST00000450866 277 ntBASIC5.6□□□□□ -1.51
ABCD3P28288 Z83838.1-202ENST00000456225 839 ntBASIC5.6□□□□□ -1.51
ABCD3P28288 RN7SL352P-201ENST00000466002 277 ntBASIC5.6□□□□□ -1.51
ABCD3P28288 AC098847.1-201ENST00000473094 348 ntBASIC5.6□□□□□ -1.51
ABCD3P28288 SNRPCP3-201ENST00000474888 476 ntBASIC5.6□□□□□ -1.51
ABCD3P28288 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC5.6□□□□□ -1.51
ABCD3P28288 AC104629.1-201ENST00000494226 508 ntBASIC5.6□□□□□ -1.51
ABCD3P28288 RBBP4P1-201ENST00000502424 1276 ntBASIC5.6□□□□□ -1.51
ABCD3P28288 RN7SKP70-201ENST00000516655 271 ntBASIC5.6□□□□□ -1.51
ABCD3P28288 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.6□□□□□ -1.51
ABCD3P28288 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.6□□□□□ -1.51
ABCD3P28288 MIR4675-201ENST00000577898 77 ntBASIC5.6□□□□□ -1.51
ABCD3P28288 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.6□□□□□ -1.51
ABCD3P28288 AC008507.3-201ENST00000585753 472 ntBASIC5.6□□□□□ -1.51
ABCD3P28288 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.6□□□□□ -1.51
ABCD3P28288 AC015911.5-201ENST00000587076 451 ntBASIC5.6□□□□□ -1.51
ABCD3P28288 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
ABCD3P28288 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.6□□□□□ -1.51
ABCD3P28288 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.6□□□□□ -1.51
ABCD3P28288 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.6□□□□□ -1.51
ABCD3P28288 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
ABCD3P28288 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.6□□□□□ -1.51
ABCD3P28288 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ABCD3P28288 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
ABCD3P28288 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.6□□□□□ -1.51
ABCD3P28288 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.6□□□□□ -1.51
ABCD3P28288 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ABCD3P28288 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.6□□□□□ -1.51
ABCD3P28288 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ABCD3P28288 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.6□□□□□ -1.51
ABCD3P28288 AC016745.2-201ENST00000608834 3443 ntBASIC5.6□□□□□ -1.51
ABCD3P28288 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.59□□□□□ -1.51
ABCD3P28288 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
ABCD3P28288 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
ABCD3P28288 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
ABCD3P28288 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.51
ABCD3P28288 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
ABCD3P28288 AL592494.2-201ENST00000425455 1548 ntBASIC5.59□□□□□ -1.51
ABCD3P28288 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.59□□□□□ -1.51
ABCD3P28288 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms