Protein–RNA interactions for Protein: P23469

PTPRE, Receptor-type tyrosine-protein phosphatase epsilon, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPREP23469 AL121908.1-201ENST00000443055 668 ntTSL 4 BASIC8.93□□□□□ -0.98
PTPREP23469 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC8.93□□□□□ -0.98
PTPREP23469 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC8.93□□□□□ -0.98
PTPREP23469 CECR9-201ENST00000453421 199 ntBASIC8.93□□□□□ -0.98
PTPREP23469 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC8.93□□□□□ -0.98
PTPREP23469 CMAHP-203ENST00000458373 1101 ntTSL 5 BASIC8.93□□□□□ -0.98
PTPREP23469 RPL23AP37-201ENST00000479658 549 ntBASIC8.93□□□□□ -0.98
PTPREP23469 RPL7AP30-201ENST00000482859 796 ntBASIC8.93□□□□□ -0.98
PTPREP23469 NDUFS5P2-201ENST00000484004 306 ntBASIC8.93□□□□□ -0.98
PTPREP23469 ZNF695-204ENST00000487338 826 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
PTPREP23469 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC8.93□□□□□ -0.98
PTPREP23469 AC098799.3-201ENST00000506095 438 ntBASIC8.93□□□□□ -0.98
PTPREP23469 AF131216.2-201ENST00000512316 564 ntBASIC8.93□□□□□ -0.98
PTPREP23469 AC100823.2-201ENST00000518337 699 ntBASIC8.93□□□□□ -0.98
PTPREP23469 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC8.93□□□□□ -0.98
PTPREP23469 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC8.93□□□□□ -0.98
PTPREP23469 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC8.93□□□□□ -0.98
PTPREP23469 YWHABP2-201ENST00000540201 713 ntBASIC8.93□□□□□ -0.98
PTPREP23469 AC018630.1-201ENST00000541376 925 ntBASIC8.93□□□□□ -0.98
PTPREP23469 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC8.93□□□□□ -0.98
PTPREP23469 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC8.93□□□□□ -0.98
PTPREP23469 AC016925.2-201ENST00000605108 242 ntBASIC8.93□□□□□ -0.98
PTPREP23469 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC8.93□□□□□ -0.98
PTPREP23469 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC8.93□□□□□ -0.98
PTPREP23469 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC8.93□□□□□ -0.98
PTPREP23469 C2orf27A-204ENST00000623058 969 ntBASIC8.93□□□□□ -0.98
PTPREP23469 TPTEP1-208ENST00000636884 213 ntBASIC8.93□□□□□ -0.98
PTPREP23469 EFHC1-233ENST00000637353 3829 ntTSL 5 BASIC8.93□□□□□ -0.98
PTPREP23469 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC8.93□□□□□ -0.98
PTPREP23469 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC8.93□□□□□ -0.98
PTPREP23469 SNCAIP-201ENST00000261367 4986 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
PTPREP23469 ARNTL2-203ENST00000311001 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
PTPREP23469 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
PTPREP23469 ADGRE1-201ENST00000250572 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
PTPREP23469 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC8.93□□□□□ -0.98
PTPREP23469 PLEKHS1-207ENST00000619563 3247 ntTSL 5 BASIC8.93□□□□□ -0.98
PTPREP23469 RFX5-201ENST00000290524 3576 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
PTPREP23469 IST1-208ENST00000535424 4082 ntTSL 5 BASIC8.93□□□□□ -0.98
PTPREP23469 MITF-203ENST00000328528 4680 ntTSL 5 BASIC8.92□□□□□ -0.98
PTPREP23469 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
PTPREP23469 HKR1-201ENST00000324411 2929 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
PTPREP23469 ATXN3-203ENST00000393287 6770 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
PTPREP23469 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC8.92□□□□□ -0.98
PTPREP23469 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
PTPREP23469 ZNF10-201ENST00000248211 4441 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
PTPREP23469 MAVS-201ENST00000416600 11596 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
PTPREP23469 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
PTPREP23469 RNA5SP302-201ENST00000364896 100 ntBASIC8.92□□□□□ -0.98
PTPREP23469 SNORD15A-201ENST00000384214 148 ntBASIC8.92□□□□□ -0.98
PTPREP23469 Y_RNA.474-201ENST00000384341 102 ntBASIC8.92□□□□□ -0.98
PTPREP23469 H2AFZP3-201ENST00000394213 387 ntBASIC8.92□□□□□ -0.98
PTPREP23469 ZNF37CP-201ENST00000406795 241 ntBASIC8.92□□□□□ -0.98
PTPREP23469 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC8.92□□□□□ -0.98
PTPREP23469 AC211486.3-201ENST00000412694 621 ntBASIC8.92□□□□□ -0.98
PTPREP23469 AL161742.1-201ENST00000418154 584 ntBASIC8.92□□□□□ -0.98
PTPREP23469 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC8.92□□□□□ -0.98
PTPREP23469 PTP4A1P1-201ENST00000420539 515 ntBASIC8.92□□□□□ -0.98
PTPREP23469 SETP9-201ENST00000423837 832 ntBASIC8.92□□□□□ -0.98
PTPREP23469 RPL5P6-201ENST00000425640 886 ntBASIC8.92□□□□□ -0.98
PTPREP23469 AC002069.1-201ENST00000429649 1159 ntBASIC8.92□□□□□ -0.98
PTPREP23469 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC8.92□□□□□ -0.98
PTPREP23469 HMGB1P45-201ENST00000435986 653 ntBASIC8.92□□□□□ -0.98
PTPREP23469 AL831737.1-201ENST00000441288 271 ntBASIC8.92□□□□□ -0.98
PTPREP23469 GAPDHP17-201ENST00000449858 1001 ntBASIC8.92□□□□□ -0.98
PTPREP23469 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC8.92□□□□□ -0.98
PTPREP23469 AL035407.2-201ENST00000454090 378 ntBASIC8.92□□□□□ -0.98
PTPREP23469 EIF3LP2-201ENST00000457262 807 ntBASIC8.92□□□□□ -0.98
PTPREP23469 AL162395.1-201ENST00000457882 422 ntBASIC8.92□□□□□ -0.98
PTPREP23469 Y_RNA.631-201ENST00000459607 101 ntBASIC8.92□□□□□ -0.98
PTPREP23469 AC234782.3-201ENST00000461229 433 ntBASIC8.92□□□□□ -0.98
PTPREP23469 RPL7P48-201ENST00000461513 746 ntBASIC8.92□□□□□ -0.98
PTPREP23469 MTCO2P29-201ENST00000465212 189 ntBASIC8.92□□□□□ -0.98
PTPREP23469 AC074386.1-201ENST00000476560 767 ntBASIC8.92□□□□□ -0.98
PTPREP23469 AC087385.2-201ENST00000477729 498 ntBASIC8.92□□□□□ -0.98
PTPREP23469 RAD51AP1P1-201ENST00000484195 1001 ntBASIC8.92□□□□□ -0.98
PTPREP23469 Y_RNA.711-201ENST00000516993 102 ntBASIC8.92□□□□□ -0.98
PTPREP23469 AC109635.6-201ENST00000525487 1113 ntBASIC8.92□□□□□ -0.98
PTPREP23469 AC087276.1-201ENST00000529659 480 ntBASIC8.92□□□□□ -0.98
PTPREP23469 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC8.92□□□□□ -0.98
PTPREP23469 OR5BN1P-201ENST00000532955 829 ntBASIC8.92□□□□□ -0.98
PTPREP23469 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC8.92□□□□□ -0.98
PTPREP23469 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC8.92□□□□□ -0.98
PTPREP23469 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC8.92□□□□□ -0.98
PTPREP23469 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC8.92□□□□□ -0.98
PTPREP23469 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC8.92□□□□□ -0.98
PTPREP23469 DNM1P31-201ENST00000564149 696 ntBASIC8.92□□□□□ -0.98
PTPREP23469 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC8.92□□□□□ -0.98
PTPREP23469 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC8.92□□□□□ -0.98
PTPREP23469 KCNMA1-AS1-204ENST00000595702 504 ntTSL 5 BASIC8.92□□□□□ -0.98
PTPREP23469 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC8.92□□□□□ -0.98
PTPREP23469 AL355472.4-201ENST00000610233 626 ntBASIC8.92□□□□□ -0.98
PTPREP23469 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
PTPREP23469 AL606760.4-201ENST00000617613 718 ntBASIC8.92□□□□□ -0.98
PTPREP23469 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
PTPREP23469 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC8.92□□□□□ -0.98
PTPREP23469 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
PTPREP23469 OR2T11-202ENST00000641193 3770 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
PTPREP23469 COX10-AS1-201ENST00000423323 3000 ntTSL 2 BASIC8.92□□□□□ -0.98
PTPREP23469 DDX3Y-202ENST00000360160 2709 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
PTPREP23469 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms