Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC4.51□□□□□ -1.69
CCL3L1P16619 MIR4420-201ENST00000583944 77 ntBASIC4.51□□□□□ -1.69
CCL3L1P16619 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC4.51□□□□□ -1.69
CCL3L1P16619 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CCL3L1P16619 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.51□□□□□ -1.69
CCL3L1P16619 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CCL3L1P16619 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCL3L1P16619 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CCL3L1P16619 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC4.51□□□□□ -1.69
CCL3L1P16619 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC4.51□□□□□ -1.69
CCL3L1P16619 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCL3L1P16619 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CCL3L1P16619 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CCL3L1P16619 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CCL3L1P16619 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
CCL3L1P16619 CASC19-248ENST00000641674 1356 ntBASIC4.51□□□□□ -1.69
CCL3L1P16619 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCL3L1P16619 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCL3L1P16619 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.51□□□□□ -1.69
CCL3L1P16619 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
CCL3L1P16619 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCL3L1P16619 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.5□□□□□ -1.69
CCL3L1P16619 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCL3L1P16619 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCL3L1P16619 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCL3L1P16619 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCL3L1P16619 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC4.5□□□□□ -1.69
CCL3L1P16619 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCL3L1P16619 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCL3L1P16619 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCL3L1P16619 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CCL3L1P16619 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC4.5□□□□□ -1.69
CCL3L1P16619 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.5□□□□□ -1.69
CCL3L1P16619 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
CCL3L1P16619 LINC01963-201ENST00000562038 3148 ntBASIC4.5□□□□□ -1.69
CCL3L1P16619 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCL3L1P16619 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CCL3L1P16619 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
CCL3L1P16619 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCL3L1P16619 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.5□□□□□ -1.69
CCL3L1P16619 SNORA70.6-201ENST00000383934 134 ntBASIC4.5□□□□□ -1.69
CCL3L1P16619 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CCL3L1P16619 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CCL3L1P16619 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.5□□□□□ -1.69
CCL3L1P16619 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC4.5□□□□□ -1.69
CCL3L1P16619 AL133482.1-201ENST00000415988 498 ntBASIC4.5□□□□□ -1.69
CCL3L1P16619 CHEK2P5-201ENST00000423877 246 ntBASIC4.5□□□□□ -1.69
CCL3L1P16619 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC4.5□□□□□ -1.69
CCL3L1P16619 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC4.5□□□□□ -1.69
CCL3L1P16619 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.5□□□□□ -1.69
CCL3L1P16619 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.5□□□□□ -1.69
CCL3L1P16619 PSAT1P4-201ENST00000466500 526 ntBASIC4.5□□□□□ -1.69
CCL3L1P16619 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.5□□□□□ -1.69
CCL3L1P16619 AL136038.1-201ENST00000497246 351 ntBASIC4.5□□□□□ -1.69
CCL3L1P16619 AC109464.1-201ENST00000511091 819 ntBASIC4.5□□□□□ -1.69
CCL3L1P16619 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.5□□□□□ -1.69
CCL3L1P16619 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.5□□□□□ -1.69
CCL3L1P16619 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC4.5□□□□□ -1.69
CCL3L1P16619 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC4.5□□□□□ -1.69
CCL3L1P16619 AC078878.1-201ENST00000539832 958 ntBASIC4.5□□□□□ -1.69
CCL3L1P16619 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC4.5□□□□□ -1.69
CCL3L1P16619 AL359715.3-201ENST00000569267 2123 ntBASIC4.5□□□□□ -1.69
CCL3L1P16619 AC011445.2-201ENST00000599274 173 ntBASIC4.5□□□□□ -1.69
CCL3L1P16619 GMFG-212ENST00000602185 423 ntTSL 3 BASIC4.5□□□□□ -1.69
CCL3L1P16619 AC000068.2-201ENST00000608816 460 ntBASIC4.5□□□□□ -1.69
CCL3L1P16619 MIR8080-201ENST00000622224 89 ntBASIC4.5□□□□□ -1.69
CCL3L1P16619 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.5□□□□□ -1.69
CCL3L1P16619 AL049767.1-202ENST00000637826 242 ntBASIC4.5□□□□□ -1.69
CCL3L1P16619 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
CCL3L1P16619 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCL3L1P16619 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CCL3L1P16619 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CCL3L1P16619 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCL3L1P16619 AL355488.2-201ENST00000609909 2850 ntBASIC4.5□□□□□ -1.69
CCL3L1P16619 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC4.5□□□□□ -1.69
CCL3L1P16619 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCL3L1P16619 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC4.5□□□□□ -1.69
CCL3L1P16619 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.5□□□□□ -1.69
CCL3L1P16619 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCL3L1P16619 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCL3L1P16619 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC4.5□□□□□ -1.69
CCL3L1P16619 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CCL3L1P16619 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CCL3L1P16619 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCL3L1P16619 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CCL3L1P16619 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCL3L1P16619 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CCL3L1P16619 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCL3L1P16619 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
CCL3L1P16619 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
CCL3L1P16619 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCL3L1P16619 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCL3L1P16619 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC4.49□□□□□ -1.69
CCL3L1P16619 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCL3L1P16619 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.49□□□□□ -1.69
CCL3L1P16619 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.49□□□□□ -1.69
CCL3L1P16619 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.49□□□□□ -1.69
CCL3L1P16619 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCL3L1P16619 AL391422.1-201ENST00000402155 436 ntBASIC4.49□□□□□ -1.69
CCL3L1P16619 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms