Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
CFTRP13569 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC9.19□□□□□ -0.94
CFTRP13569 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC9.19□□□□□ -0.94
CFTRP13569 CLASP2-213ENST00000480013 5972 ntTSL 5 BASIC9.18□□□□□ -0.94
CFTRP13569 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC9.18□□□□□ -0.94
CFTRP13569 AC022034.1-201ENST00000512867 2156 ntBASIC9.18□□□□□ -0.94
CFTRP13569 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC9.18□□□□□ -0.94
CFTRP13569 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
CFTRP13569 SNORA62-201ENST00000365493 153 ntBASIC9.18□□□□□ -0.94
CFTRP13569 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC9.18□□□□□ -0.94
CFTRP13569 MIR105-1-201ENST00000385222 81 ntBASIC9.18□□□□□ -0.94
CFTRP13569 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
CFTRP13569 RPS17P17-201ENST00000419392 409 ntBASIC9.18□□□□□ -0.94
CFTRP13569 RIMKLBP2-201ENST00000424737 654 ntBASIC9.18□□□□□ -0.94
CFTRP13569 USP24P1-201ENST00000433802 779 ntBASIC9.18□□□□□ -0.94
CFTRP13569 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC9.18□□□□□ -0.94
CFTRP13569 AC096754.1-201ENST00000508904 818 ntBASIC9.18□□□□□ -0.94
CFTRP13569 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC9.18□□□□□ -0.94
CFTRP13569 GCSHP4-201ENST00000538792 439 ntBASIC9.18□□□□□ -0.94
CFTRP13569 MIR6758-201ENST00000620653 63 ntBASIC9.18□□□□□ -0.94
CFTRP13569 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC9.18□□□□□ -0.94
CFTRP13569 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
CFTRP13569 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
CFTRP13569 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
CFTRP13569 AC114774.1-201ENST00000507410 1770 ntBASIC9.18□□□□□ -0.94
CFTRP13569 ZNF445-202ENST00000425708 10052 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
CFTRP13569 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
CFTRP13569 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
CFTRP13569 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
CFTRP13569 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
CFTRP13569 RNA5SP428-201ENST00000365129 132 ntBASIC9.17□□□□□ -0.94
CFTRP13569 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC9.17□□□□□ -0.94
CFTRP13569 PRPF38AP2-201ENST00000438179 851 ntBASIC9.17□□□□□ -0.94
CFTRP13569 AL161722.1-201ENST00000446972 1032 ntBASIC9.17□□□□□ -0.94
CFTRP13569 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC9.17□□□□□ -0.94
CFTRP13569 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
CFTRP13569 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
CFTRP13569 ATP5J2P6-201ENST00000565203 266 ntBASIC9.17□□□□□ -0.94
CFTRP13569 AP005432.2-201ENST00000608162 586 ntBASIC9.17□□□□□ -0.94
CFTRP13569 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
CFTRP13569 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC9.17□□□□□ -0.94
CFTRP13569 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
CFTRP13569 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
CFTRP13569 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
CFTRP13569 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
CFTRP13569 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
CFTRP13569 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
CFTRP13569 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
CFTRP13569 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC9.17□□□□□ -0.94
CFTRP13569 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
CFTRP13569 C1orf21-201ENST00000235307 10265 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
CFTRP13569 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC9.16□□□□□ -0.94
CFTRP13569 RNA5SP455-201ENST00000365190 119 ntBASIC9.16□□□□□ -0.94
CFTRP13569 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC9.16□□□□□ -0.94
CFTRP13569 NDUFA12P1-201ENST00000455914 406 ntBASIC9.16□□□□□ -0.94
CFTRP13569 AC034205.1-201ENST00000520621 638 ntBASIC9.16□□□□□ -0.94
CFTRP13569 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC9.16□□□□□ -0.94
CFTRP13569 AC068831.8-201ENST00000620171 435 ntBASIC9.16□□□□□ -0.94
CFTRP13569 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC9.16□□□□□ -0.94
CFTRP13569 AL353796.1-201ENST00000561542 3241 ntBASIC9.16□□□□□ -0.94
CFTRP13569 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC9.16□□□□□ -0.94
CFTRP13569 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC9.16□□□□□ -0.94
CFTRP13569 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
CFTRP13569 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
CFTRP13569 RPL5P25-201ENST00000441148 775 ntBASIC9.15□□□□□ -0.94
CFTRP13569 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
CFTRP13569 AC092754.1-201ENST00000472975 479 ntBASIC9.15□□□□□ -0.94
CFTRP13569 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC9.15□□□□□ -0.94
CFTRP13569 AL133481.2-203ENST00000607558 139 ntBASIC9.15□□□□□ -0.94
CFTRP13569 EEF1A1P33-201ENST00000554413 1362 ntBASIC9.15□□□□□ -0.94
CFTRP13569 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
CFTRP13569 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
CFTRP13569 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC9.15□□□□□ -0.94
CFTRP13569 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC9.15□□□□□ -0.94
CFTRP13569 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
CFTRP13569 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC9.15□□□□□ -0.94
CFTRP13569 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC9.15□□□□□ -0.95
CFTRP13569 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.95
CFTRP13569 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC9.15□□□□□ -0.95
CFTRP13569 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.95
CFTRP13569 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC9.15□□□□□ -0.95
CFTRP13569 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.95
CFTRP13569 AC068870.1-201ENST00000563737 2455 ntBASIC9.15□□□□□ -0.95
CFTRP13569 SDAD1P1-202ENST00000524156 2051 ntBASIC9.15□□□□□ -0.95
CFTRP13569 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
CFTRP13569 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC9.15□□□□□ -0.95
CFTRP13569 GAPDHP15-201ENST00000398586 975 ntBASIC9.15□□□□□ -0.95
CFTRP13569 RPL10P10-201ENST00000403509 664 ntBASIC9.15□□□□□ -0.95
CFTRP13569 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC9.15□□□□□ -0.95
CFTRP13569 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC9.15□□□□□ -0.95
CFTRP13569 RPL7P11-201ENST00000437586 658 ntBASIC9.15□□□□□ -0.95
CFTRP13569 AC234781.3-201ENST00000452540 973 ntBASIC9.15□□□□□ -0.95
CFTRP13569 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC9.15□□□□□ -0.95
CFTRP13569 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC9.15□□□□□ -0.95
CFTRP13569 AC122688.1-201ENST00000541494 223 ntBASIC9.15□□□□□ -0.95
CFTRP13569 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC9.15□□□□□ -0.95
CFTRP13569 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC9.15□□□□□ -0.95
CFTRP13569 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC9.15□□□□□ -0.95
CFTRP13569 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC9.15□□□□□ -0.95
CFTRP13569 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC9.15□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms