Protein–RNA interactions for Protein: P12814

ACTN1, Alpha-actinin-1, humanhuman

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1P12814 SNORD116-30-201ENST00000516468 85 ntBASIC6.44□□□□□ -1.38
ACTN1P12814 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC6.44□□□□□ -1.38
ACTN1P12814 AC025857.1-201ENST00000525252 377 ntBASIC6.44□□□□□ -1.38
ACTN1P12814 OR4A42P-201ENST00000531397 938 ntBASIC6.44□□□□□ -1.38
ACTN1P12814 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.44□□□□□ -1.38
ACTN1P12814 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC6.44□□□□□ -1.38
ACTN1P12814 AC234775.3-201ENST00000564612 656 ntBASIC6.44□□□□□ -1.38
ACTN1P12814 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
ACTN1P12814 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC6.44□□□□□ -1.38
ACTN1P12814 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.44□□□□□ -1.38
ACTN1P12814 AC007204.2-201ENST00000615022 616 ntBASIC6.44□□□□□ -1.38
ACTN1P12814 AC243960.7-201ENST00000623532 707 ntBASIC6.44□□□□□ -1.38
ACTN1P12814 CASC19-264ENST00000641912 1184 ntBASIC6.44□□□□□ -1.38
ACTN1P12814 AC020656.2-201ENST00000613291 5309 ntBASIC6.44□□□□□ -1.38
ACTN1P12814 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
ACTN1P12814 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
ACTN1P12814 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
ACTN1P12814 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.44□□□□□ -1.38
ACTN1P12814 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.44□□□□□ -1.38
ACTN1P12814 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
ACTN1P12814 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
ACTN1P12814 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
ACTN1P12814 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
ACTN1P12814 AC092070.2-203ENST00000598377 3644 ntBASIC6.43□□□□□ -1.38
ACTN1P12814 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
ACTN1P12814 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.43□□□□□ -1.38
ACTN1P12814 AL592429.1-201ENST00000403909 1473 ntBASIC6.43□□□□□ -1.38
ACTN1P12814 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
ACTN1P12814 RNA5SP211-201ENST00000365516 117 ntBASIC6.43□□□□□ -1.38
ACTN1P12814 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
ACTN1P12814 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC6.43□□□□□ -1.38
ACTN1P12814 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.43□□□□□ -1.38
ACTN1P12814 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.43□□□□□ -1.38
ACTN1P12814 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.43□□□□□ -1.38
ACTN1P12814 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.43□□□□□ -1.38
ACTN1P12814 snoU13.29-201ENST00000459370 104 ntBASIC6.43□□□□□ -1.38
ACTN1P12814 AL603882.1-201ENST00000463059 681 ntBASIC6.43□□□□□ -1.38
ACTN1P12814 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.43□□□□□ -1.38
ACTN1P12814 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC6.43□□□□□ -1.38
ACTN1P12814 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
ACTN1P12814 RNU4-18P-201ENST00000516751 149 ntBASIC6.43□□□□□ -1.38
ACTN1P12814 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.43□□□□□ -1.38
ACTN1P12814 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.43□□□□□ -1.38
ACTN1P12814 HAUS8P1-201ENST00000549005 542 ntBASIC6.43□□□□□ -1.38
ACTN1P12814 NPM1P42-201ENST00000560329 862 ntBASIC6.43□□□□□ -1.38
ACTN1P12814 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.43□□□□□ -1.38
ACTN1P12814 FKBP1AP1-201ENST00000594588 318 ntBASIC6.43□□□□□ -1.38
ACTN1P12814 AC145423.1-201ENST00000605712 336 ntBASIC6.43□□□□□ -1.38
ACTN1P12814 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC6.43□□□□□ -1.38
ACTN1P12814 AL355974.3-201ENST00000617383 467 ntBASIC6.43□□□□□ -1.38
ACTN1P12814 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.43□□□□□ -1.38
ACTN1P12814 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
ACTN1P12814 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
ACTN1P12814 AC011933.2-201ENST00000578539 2790 ntBASIC6.43□□□□□ -1.38
ACTN1P12814 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
ACTN1P12814 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
ACTN1P12814 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
ACTN1P12814 AL591135.1-201ENST00000401578 5914 ntBASIC6.43□□□□□ -1.38
ACTN1P12814 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
ACTN1P12814 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.42□□□□□ -1.38
ACTN1P12814 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
ACTN1P12814 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
ACTN1P12814 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
ACTN1P12814 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.42□□□□□ -1.38
ACTN1P12814 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
ACTN1P12814 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.42□□□□□ -1.38
ACTN1P12814 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
ACTN1P12814 MTCO1P8-201ENST00000416914 1523 ntBASIC6.42□□□□□ -1.38
ACTN1P12814 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC6.42□□□□□ -1.38
ACTN1P12814 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC6.42□□□□□ -1.38
ACTN1P12814 ZNF736P10Y-201ENST00000403990 1110 ntBASIC6.42□□□□□ -1.38
ACTN1P12814 NACAP7-201ENST00000407371 609 ntBASIC6.42□□□□□ -1.38
ACTN1P12814 RN7SKP29-201ENST00000410957 272 ntBASIC6.42□□□□□ -1.38
ACTN1P12814 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.42□□□□□ -1.38
ACTN1P12814 AL590399.2-201ENST00000427536 309 ntBASIC6.42□□□□□ -1.38
ACTN1P12814 AC073410.1-201ENST00000435125 589 ntBASIC6.42□□□□□ -1.38
ACTN1P12814 FMO7P-201ENST00000436045 768 ntBASIC6.42□□□□□ -1.38
ACTN1P12814 AC012075.1-201ENST00000436549 580 ntBASIC6.42□□□□□ -1.38
ACTN1P12814 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC6.42□□□□□ -1.38
ACTN1P12814 AC011225.1-201ENST00000457751 369 ntBASIC6.42□□□□□ -1.38
ACTN1P12814 AP002371.1-201ENST00000463604 433 ntBASIC6.42□□□□□ -1.38
ACTN1P12814 RPS26P24-201ENST00000497656 331 ntBASIC6.42□□□□□ -1.38
ACTN1P12814 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.42□□□□□ -1.38
ACTN1P12814 AC093763.2-201ENST00000505334 1223 ntBASIC6.42□□□□□ -1.38
ACTN1P12814 RNA5SP92-201ENST00000516437 110 ntBASIC6.42□□□□□ -1.38
ACTN1P12814 AP003080.1-202ENST00000526526 915 ntBASIC6.42□□□□□ -1.38
ACTN1P12814 HMGN2P47-201ENST00000559378 272 ntBASIC6.42□□□□□ -1.38
ACTN1P12814 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC6.42□□□□□ -1.38
ACTN1P12814 AL583832.1-201ENST00000603227 784 ntBASIC6.42□□□□□ -1.38
ACTN1P12814 AP003400.2-201ENST00000624036 666 ntBASIC6.42□□□□□ -1.38
ACTN1P12814 AL390318.1-201ENST00000624564 687 ntBASIC6.42□□□□□ -1.38
ACTN1P12814 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.42□□□□□ -1.38
ACTN1P12814 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC6.42□□□□□ -1.38
ACTN1P12814 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC6.42□□□□□ -1.38
ACTN1P12814 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
ACTN1P12814 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
ACTN1P12814 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
ACTN1P12814 AC012078.1-201ENST00000405035 1646 ntBASIC6.42□□□□□ -1.38
ACTN1P12814 YES1P1-201ENST00000418510 1628 ntBASIC6.42□□□□□ -1.38
ACTN1P12814 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms