Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 Y_RNA.372-201ENST00000365599 102 ntBASIC10.4□□□□□ -0.74
CHGAP10645 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
CHGAP10645 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CHGAP10645 MIR152-201ENST00000385212 87 ntBASIC10.4□□□□□ -0.74
CHGAP10645 MT-TL1-201ENST00000386347 75 ntBASIC10.4□□□□□ -0.74
CHGAP10645 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC10.4□□□□□ -0.74
CHGAP10645 AC104843.2-201ENST00000427666 297 ntBASIC10.4□□□□□ -0.74
CHGAP10645 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC10.4□□□□□ -0.74
CHGAP10645 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC10.4□□□□□ -0.74
CHGAP10645 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC10.4□□□□□ -0.74
CHGAP10645 AC013267.1-201ENST00000458227 267 ntBASIC10.4□□□□□ -0.74
CHGAP10645 CTSLP6-201ENST00000458273 1002 ntBASIC10.4□□□□□ -0.74
CHGAP10645 AC135999.1-201ENST00000478962 479 ntBASIC10.4□□□□□ -0.74
CHGAP10645 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC10.4□□□□□ -0.74
CHGAP10645 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC10.4□□□□□ -0.74
CHGAP10645 RN7SKP183-201ENST00000517169 324 ntBASIC10.4□□□□□ -0.74
CHGAP10645 AC116917.1-201ENST00000520558 305 ntBASIC10.4□□□□□ -0.74
CHGAP10645 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC10.4□□□□□ -0.74
CHGAP10645 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC10.4□□□□□ -0.74
CHGAP10645 CR383656.6-201ENST00000550518 394 ntBASIC10.4□□□□□ -0.74
CHGAP10645 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC10.4□□□□□ -0.74
CHGAP10645 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC10.4□□□□□ -0.74
CHGAP10645 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC10.4□□□□□ -0.74
CHGAP10645 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC10.4□□□□□ -0.74
CHGAP10645 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC10.4□□□□□ -0.74
CHGAP10645 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC10.4□□□□□ -0.74
CHGAP10645 AC140479.4-205ENST00000636339 820 ntBASIC10.4□□□□□ -0.74
CHGAP10645 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC10.4□□□□□ -0.74
CHGAP10645 OR52B5P-202ENST00000641118 1110 ntBASIC10.4□□□□□ -0.74
CHGAP10645 ZNF568-215ENST00000617745 2441 ntTSL 5 BASIC10.4□□□□□ -0.74
CHGAP10645 ZNF101P1-201ENST00000435701 1720 ntBASIC10.4□□□□□ -0.74
CHGAP10645 OR6N1-203ENST00000641846 2640 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
CHGAP10645 ZNF19-210ENST00000567225 2838 ntTSL 3 BASIC10.4□□□□□ -0.74
CHGAP10645 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC10.4□□□□□ -0.74
CHGAP10645 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC10.4□□□□□ -0.74
CHGAP10645 AL669831.5-218ENST00000591702 1873 ntBASIC10.4□□□□□ -0.75
CHGAP10645 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
CHGAP10645 AC135352.1-201ENST00000506173 1418 ntBASIC10.4□□□□□ -0.75
CHGAP10645 AC092111.2-201ENST00000611627 1414 ntBASIC10.4□□□□□ -0.75
CHGAP10645 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
CHGAP10645 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
CHGAP10645 SLC22A10-201ENST00000332793 2026 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
CHGAP10645 MTCO1P6-201ENST00000481192 1384 ntBASIC10.39□□□□□ -0.75
CHGAP10645 SEMA3E-202ENST00000427262 2414 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
CHGAP10645 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CHGAP10645 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CHGAP10645 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
CHGAP10645 PLCG2-201ENST00000359376 3819 ntTSL 5 BASIC10.39□□□□□ -0.75
CHGAP10645 PLAGL1-202ENST00000360537 4430 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
CHGAP10645 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CHGAP10645 DAZ2-207ENST00000382449 3791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
CHGAP10645 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CHGAP10645 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CHGAP10645 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CHGAP10645 AC104581.5-201ENST00000624171 7141 ntBASIC10.39□□□□□ -0.75
CHGAP10645 HNRNPA1P54-201ENST00000411857 9714 ntBASIC10.39□□□□□ -0.75
CHGAP10645 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC10.39□□□□□ -0.75
CHGAP10645 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CHGAP10645 Y_RNA.535-201ENST00000384612 99 ntBASIC10.39□□□□□ -0.75
CHGAP10645 FCF1P10-201ENST00000407590 479 ntBASIC10.39□□□□□ -0.75
CHGAP10645 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC10.39□□□□□ -0.75
CHGAP10645 RAC1P4-201ENST00000419413 579 ntBASIC10.39□□□□□ -0.75
CHGAP10645 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CHGAP10645 AC009237.2-201ENST00000421358 284 ntBASIC10.39□□□□□ -0.75
CHGAP10645 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
CHGAP10645 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC10.39□□□□□ -0.75
CHGAP10645 AL138899.2-201ENST00000439139 499 ntBASIC10.39□□□□□ -0.75
CHGAP10645 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC10.39□□□□□ -0.75
CHGAP10645 CALM1P2-201ENST00000452941 448 ntBASIC10.39□□□□□ -0.75
CHGAP10645 AL034369.1-201ENST00000453808 477 ntBASIC10.39□□□□□ -0.75
CHGAP10645 RPSAP7-201ENST00000456871 885 ntBASIC10.39□□□□□ -0.75
CHGAP10645 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC10.39□□□□□ -0.75
CHGAP10645 AC069439.1-201ENST00000494739 167 ntBASIC10.39□□□□□ -0.75
CHGAP10645 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
CHGAP10645 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC10.39□□□□□ -0.75
CHGAP10645 APOBEC3AP1-201ENST00000511396 287 ntBASIC10.39□□□□□ -0.75
CHGAP10645 RNU6-1334P-201ENST00000516032 105 ntBASIC10.39□□□□□ -0.75
CHGAP10645 SCARNA15.1-201ENST00000516384 125 ntBASIC10.39□□□□□ -0.75
CHGAP10645 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC10.39□□□□□ -0.75
CHGAP10645 AC083923.1-201ENST00000523708 376 ntBASIC10.39□□□□□ -0.75
CHGAP10645 AC024405.1-201ENST00000532521 1042 ntBASIC10.39□□□□□ -0.75
CHGAP10645 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC10.39□□□□□ -0.75
CHGAP10645 PRB1-203ENST00000545626 710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
CHGAP10645 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
CHGAP10645 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC10.39□□□□□ -0.75
CHGAP10645 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC10.39□□□□□ -0.75
CHGAP10645 AC091489.2-201ENST00000566263 604 ntBASIC10.39□□□□□ -0.75
CHGAP10645 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC10.39□□□□□ -0.75
CHGAP10645 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC10.39□□□□□ -0.75
CHGAP10645 UBE2V2P2-201ENST00000587677 504 ntBASIC10.39□□□□□ -0.75
CHGAP10645 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CHGAP10645 AL390838.2-201ENST00000602394 274 ntBASIC10.39□□□□□ -0.75
CHGAP10645 AC010680.3-201ENST00000604215 520 ntBASIC10.39□□□□□ -0.75
CHGAP10645 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC10.39□□□□□ -0.75
CHGAP10645 AC024560.3-201ENST00000608482 349 ntBASIC10.39□□□□□ -0.75
CHGAP10645 AC124864.2-201ENST00000624736 186 ntBASIC10.39□□□□□ -0.75
CHGAP10645 SELP-202ENST00000367786 2402 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
CHGAP10645 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC10.39□□□□□ -0.75
CHGAP10645 KIAA0753-201ENST00000361413 4859 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
CHGAP10645 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms