Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
FREM3P0C091 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5□□□□□ -1.61
FREM3P0C091 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5□□□□□ -1.61
FREM3P0C091 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC5□□□□□ -1.61
FREM3P0C091 AL354868.1-201ENST00000417077 482 ntBASIC5□□□□□ -1.61
FREM3P0C091 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5□□□□□ -1.61
FREM3P0C091 SNORD125-201ENST00000459538 96 ntBASIC5□□□□□ -1.61
FREM3P0C091 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
FREM3P0C091 SCARNA20.4-201ENST00000516969 131 ntBASIC5□□□□□ -1.61
FREM3P0C091 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5□□□□□ -1.61
FREM3P0C091 AC069307.1-201ENST00000602820 447 ntBASIC5□□□□□ -1.61
FREM3P0C091 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5□□□□□ -1.61
FREM3P0C091 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5□□□□□ -1.61
FREM3P0C091 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5□□□□□ -1.61
FREM3P0C091 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
FREM3P0C091 PWAR1-201ENST00000624188 2414 ntBASIC5□□□□□ -1.61
FREM3P0C091 AC130360.2-201ENST00000533477 1556 ntBASIC5□□□□□ -1.61
FREM3P0C091 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC5□□□□□ -1.61
FREM3P0C091 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
FREM3P0C091 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5□□□□□ -1.61
FREM3P0C091 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
FREM3P0C091 AC089998.1-201ENST00000548575 3141 ntBASIC5□□□□□ -1.61
FREM3P0C091 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5□□□□□ -1.61
FREM3P0C091 RNA5SP453-201ENST00000362503 119 ntBASIC5□□□□□ -1.61
FREM3P0C091 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5□□□□□ -1.61
FREM3P0C091 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5□□□□□ -1.61
FREM3P0C091 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
FREM3P0C091 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5□□□□□ -1.61
FREM3P0C091 AL121776.1-201ENST00000429337 372 ntBASIC5□□□□□ -1.61
FREM3P0C091 CYCSP12-201ENST00000437729 300 ntBASIC5□□□□□ -1.61
FREM3P0C091 AC023271.1-201ENST00000445936 1090 ntBASIC5□□□□□ -1.61
FREM3P0C091 AC073072.2-201ENST00000447425 348 ntBASIC5□□□□□ -1.61
FREM3P0C091 AL606490.1-201ENST00000452266 765 ntBASIC5□□□□□ -1.61
FREM3P0C091 RN7SL172P-201ENST00000460535 303 ntBASIC5□□□□□ -1.61
FREM3P0C091 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5□□□□□ -1.61
FREM3P0C091 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5□□□□□ -1.61
FREM3P0C091 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5□□□□□ -1.61
FREM3P0C091 RPL10P14-201ENST00000565265 298 ntBASIC5□□□□□ -1.61
FREM3P0C091 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
FREM3P0C091 TAS2R6P-201ENST00000605022 826 ntBASIC5□□□□□ -1.61
FREM3P0C091 AC024940.4-201ENST00000605507 246 ntBASIC5□□□□□ -1.61
FREM3P0C091 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5□□□□□ -1.61
FREM3P0C091 AC079776.5-201ENST00000641920 211 ntBASIC5□□□□□ -1.61
FREM3P0C091 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
FREM3P0C091 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
FREM3P0C091 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
FREM3P0C091 AC003973.3-201ENST00000624863 2822 ntBASIC5□□□□□ -1.61
FREM3P0C091 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5□□□□□ -1.61
FREM3P0C091 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5□□□□□ -1.61
FREM3P0C091 AC140134.1-201ENST00000511830 3544 ntBASIC5□□□□□ -1.61
FREM3P0C091 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
FREM3P0C091 OR4F13P-202ENST00000560066 2054 ntBASIC5□□□□□ -1.61
FREM3P0C091 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC5□□□□□ -1.61
FREM3P0C091 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
FREM3P0C091 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
FREM3P0C091 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.99□□□□□ -1.61
FREM3P0C091 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
FREM3P0C091 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
FREM3P0C091 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
FREM3P0C091 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
FREM3P0C091 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
FREM3P0C091 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC4.99□□□□□ -1.61
FREM3P0C091 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC4.99□□□□□ -1.61
FREM3P0C091 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
FREM3P0C091 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
FREM3P0C091 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.99□□□□□ -1.61
FREM3P0C091 Z93019.1-201ENST00000416450 973 ntBASIC4.99□□□□□ -1.61
FREM3P0C091 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.99□□□□□ -1.61
FREM3P0C091 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC4.99□□□□□ -1.61
FREM3P0C091 AC005297.1-201ENST00000444765 862 ntBASIC4.99□□□□□ -1.61
FREM3P0C091 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.99□□□□□ -1.61
FREM3P0C091 AC009963.4-201ENST00000448535 339 ntBASIC4.99□□□□□ -1.61
FREM3P0C091 RPS23P2-201ENST00000463671 415 ntBASIC4.99□□□□□ -1.61
FREM3P0C091 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC4.99□□□□□ -1.61
FREM3P0C091 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC4.99□□□□□ -1.61
FREM3P0C091 AC090058.1-201ENST00000498788 435 ntBASIC4.99□□□□□ -1.61
FREM3P0C091 HMGB1P44-201ENST00000508597 572 ntBASIC4.99□□□□□ -1.61
FREM3P0C091 RNA5SP34-201ENST00000516887 130 ntBASIC4.99□□□□□ -1.61
FREM3P0C091 AGGF1P7-201ENST00000562369 913 ntBASIC4.99□□□□□ -1.61
FREM3P0C091 AC233699.1-201ENST00000569955 1168 ntBASIC4.99□□□□□ -1.61
FREM3P0C091 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.99□□□□□ -1.61
FREM3P0C091 AL512329.2-201ENST00000607350 548 ntBASIC4.99□□□□□ -1.61
FREM3P0C091 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.99□□□□□ -1.61
FREM3P0C091 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.99□□□□□ -1.61
FREM3P0C091 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
FREM3P0C091 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC4.99□□□□□ -1.61
FREM3P0C091 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
FREM3P0C091 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
FREM3P0C091 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC4.99□□□□□ -1.61
FREM3P0C091 AC096921.1-201ENST00000411661 375 ntBASIC4.99□□□□□ -1.61
FREM3P0C091 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC4.99□□□□□ -1.61
FREM3P0C091 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.99□□□□□ -1.61
FREM3P0C091 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
FREM3P0C091 DSTNP5-201ENST00000427921 523 ntBASIC4.99□□□□□ -1.61
FREM3P0C091 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.99□□□□□ -1.61
FREM3P0C091 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.99□□□□□ -1.61
FREM3P0C091 BX510359.5-201ENST00000515651 304 ntBASIC4.99□□□□□ -1.61
FREM3P0C091 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC4.99□□□□□ -1.61
FREM3P0C091 NMNAT1P5-201ENST00000559657 841 ntBASIC4.99□□□□□ -1.61
FREM3P0C091 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms