Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
COL5A2P05997 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
COL5A2P05997 AC007620.2-201ENST00000600539 1697 ntTSL 5 BASIC7.13□□□□□ -1.27
COL5A2P05997 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
COL5A2P05997 SNORD1C-201ENST00000363315 78 ntBASIC7.13□□□□□ -1.27
COL5A2P05997 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
COL5A2P05997 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC7.13□□□□□ -1.27
COL5A2P05997 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC7.13□□□□□ -1.27
COL5A2P05997 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC7.13□□□□□ -1.27
COL5A2P05997 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC7.13□□□□□ -1.27
COL5A2P05997 RPL12P39-201ENST00000455456 496 ntBASIC7.13□□□□□ -1.27
COL5A2P05997 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC7.13□□□□□ -1.27
COL5A2P05997 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
COL5A2P05997 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
COL5A2P05997 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC7.13□□□□□ -1.27
COL5A2P05997 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC7.13□□□□□ -1.27
COL5A2P05997 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC7.13□□□□□ -1.27
COL5A2P05997 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC7.13□□□□□ -1.27
COL5A2P05997 OR5AM1P-201ENST00000532136 1032 ntBASIC7.13□□□□□ -1.27
COL5A2P05997 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC7.13□□□□□ -1.27
COL5A2P05997 AL683813.2-201ENST00000605245 502 ntBASIC7.13□□□□□ -1.27
COL5A2P05997 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC7.13□□□□□ -1.27
COL5A2P05997 AC015660.5-201ENST00000623238 564 ntBASIC7.13□□□□□ -1.27
COL5A2P05997 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC7.13□□□□□ -1.27
COL5A2P05997 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
COL5A2P05997 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
COL5A2P05997 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC7.13□□□□□ -1.27
COL5A2P05997 AC005034.3-201ENST00000604845 1747 ntBASIC7.13□□□□□ -1.27
COL5A2P05997 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
COL5A2P05997 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC7.13□□□□□ -1.27
COL5A2P05997 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
COL5A2P05997 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
COL5A2P05997 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC7.13□□□□□ -1.27
COL5A2P05997 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
COL5A2P05997 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
COL5A2P05997 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC7.13□□□□□ -1.27
COL5A2P05997 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC7.13□□□□□ -1.27
COL5A2P05997 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC7.13□□□□□ -1.27
COL5A2P05997 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
COL5A2P05997 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC7.13□□□□□ -1.27
COL5A2P05997 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC7.12□□□□□ -1.27
COL5A2P05997 AC068870.1-201ENST00000563737 2455 ntBASIC7.12□□□□□ -1.27
COL5A2P05997 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL5A2P05997 AC126755.2-208ENST00000327792 462 ntBASIC7.12□□□□□ -1.27
COL5A2P05997 AC138969.1-213ENST00000331436 462 ntBASIC7.12□□□□□ -1.27
COL5A2P05997 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
COL5A2P05997 MGAT2P2-201ENST00000427194 797 ntBASIC7.12□□□□□ -1.27
COL5A2P05997 AC008072.1-201ENST00000434254 824 ntBASIC7.12□□□□□ -1.27
COL5A2P05997 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC7.12□□□□□ -1.27
COL5A2P05997 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC7.12□□□□□ -1.27
COL5A2P05997 RN7SKP98-201ENST00000517070 156 ntBASIC7.12□□□□□ -1.27
COL5A2P05997 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC7.12□□□□□ -1.27
COL5A2P05997 AC068790.4-201ENST00000602474 263 ntBASIC7.12□□□□□ -1.27
COL5A2P05997 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC7.12□□□□□ -1.27
COL5A2P05997 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC7.12□□□□□ -1.27
COL5A2P05997 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL5A2P05997 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
COL5A2P05997 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
COL5A2P05997 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC7.12□□□□□ -1.27
COL5A2P05997 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
COL5A2P05997 HSPD1P7-201ENST00000447985 1686 ntBASIC7.12□□□□□ -1.27
COL5A2P05997 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL5A2P05997 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL5A2P05997 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL5A2P05997 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
COL5A2P05997 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC7.12□□□□□ -1.27
COL5A2P05997 RAD17P2-201ENST00000451754 1977 ntBASIC7.11□□□□□ -1.27
COL5A2P05997 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
COL5A2P05997 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
COL5A2P05997 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
COL5A2P05997 MIR105-1-201ENST00000385222 81 ntBASIC7.11□□□□□ -1.27
COL5A2P05997 AC019050.1-201ENST00000418508 492 ntBASIC7.11□□□□□ -1.27
COL5A2P05997 RNGTTP1-201ENST00000420965 728 ntBASIC7.11□□□□□ -1.27
COL5A2P05997 OR2AM1P-201ENST00000422137 422 ntBASIC7.11□□□□□ -1.27
COL5A2P05997 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC7.11□□□□□ -1.27
COL5A2P05997 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC7.11□□□□□ -1.27
COL5A2P05997 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC7.11□□□□□ -1.27
COL5A2P05997 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC7.11□□□□□ -1.27
COL5A2P05997 RN7SL205P-201ENST00000490174 284 ntBASIC7.11□□□□□ -1.27
COL5A2P05997 GTF2F2P1-201ENST00000511083 675 ntBASIC7.11□□□□□ -1.27
COL5A2P05997 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
COL5A2P05997 RN7SL356P-201ENST00000582228 248 ntBASIC7.11□□□□□ -1.27
COL5A2P05997 RN7SL52P-201ENST00000584271 284 ntBASIC7.11□□□□□ -1.27
COL5A2P05997 RN7SL722P-201ENST00000617780 284 ntBASIC7.11□□□□□ -1.27
COL5A2P05997 RN7SL565P-201ENST00000618246 284 ntBASIC7.11□□□□□ -1.27
COL5A2P05997 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC7.11□□□□□ -1.27
COL5A2P05997 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL5A2P05997 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
COL5A2P05997 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC7.11□□□□□ -1.27
COL5A2P05997 AC132825.1-201ENST00000463573 2247 ntBASIC7.11□□□□□ -1.27
COL5A2P05997 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
COL5A2P05997 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL5A2P05997 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC7.11□□□□□ -1.27
COL5A2P05997 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL5A2P05997 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL5A2P05997 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
COL5A2P05997 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC7.11□□□□□ -1.27
COL5A2P05997 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL5A2P05997 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL5A2P05997 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms