Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 NUP214-201ENST00000359428 7600 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
APOBP04114 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC3.28□□□□□ -1.88
APOBP04114 TMEM183AP1-205ENST00000432739 290 ntBASIC3.28□□□□□ -1.88
APOBP04114 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC3.28□□□□□ -1.88
APOBP04114 OR52J1P-201ENST00000450596 932 ntBASIC3.28□□□□□ -1.88
APOBP04114 AL445687.2-201ENST00000458156 728 ntBASIC3.28□□□□□ -1.88
APOBP04114 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC3.28□□□□□ -1.88
APOBP04114 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC3.28□□□□□ -1.88
APOBP04114 AC093765.1-201ENST00000603758 881 ntBASIC3.28□□□□□ -1.88
APOBP04114 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.28□□□□□ -1.88
APOBP04114 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
APOBP04114 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC3.28□□□□□ -1.88
APOBP04114 FLNB-204ENST00000429972 9430 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
APOBP04114 RIPOR2-208ENST00000613507 5539 ntAPPRIS P4 TSL 5 BASIC3.28□□□□□ -1.88
APOBP04114 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC3.28□□□□□ -1.89
APOBP04114 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
APOBP04114 PAN2-202ENST00000425394 5372 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
APOBP04114 AGAP1-212ENST00000614409 9932 ntTSL 5 BASIC3.27□□□□□ -1.89
APOBP04114 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
APOBP04114 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
APOBP04114 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
APOBP04114 RNA5SP44-201ENST00000410446 133 ntBASIC3.27□□□□□ -1.89
APOBP04114 RPL17P36-201ENST00000420302 549 ntBASIC3.27□□□□□ -1.89
APOBP04114 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC3.27□□□□□ -1.89
APOBP04114 RPL12P20-201ENST00000475538 479 ntBASIC3.27□□□□□ -1.89
APOBP04114 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC3.27□□□□□ -1.89
APOBP04114 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC3.27□□□□□ -1.89
APOBP04114 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
APOBP04114 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC3.27□□□□□ -1.89
APOBP04114 IGFN1-202ENST00000335211 11810 ntAPPRIS P2 TSL 5 BASIC3.27□□□□□ -1.89
APOBP04114 THSD7B-201ENST00000272643 5939 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
APOBP04114 AL391262.1-201ENST00000556558 1992 ntBASIC3.27□□□□□ -1.89
APOBP04114 SPTAN1-203ENST00000372739 7868 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
APOBP04114 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
APOBP04114 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
APOBP04114 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
APOBP04114 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
APOBP04114 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC3.27□□□□□ -1.89
APOBP04114 KCNK10-203ENST00000340700 7501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
APOBP04114 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC3.27□□□□□ -1.89
APOBP04114 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC3.27□□□□□ -1.89
APOBP04114 OR11H3P-201ENST00000554547 982 ntBASIC3.27□□□□□ -1.89
APOBP04114 AC023575.1-201ENST00000580510 358 ntBASIC3.27□□□□□ -1.89
APOBP04114 AC008655.2-201ENST00000597049 304 ntTSL 4 BASIC3.27□□□□□ -1.89
APOBP04114 AC135068.5-201ENST00000624197 983 ntBASIC3.27□□□□□ -1.89
APOBP04114 UTY-205ENST00000382896 6661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
APOBP04114 UTY-211ENST00000540140 6652 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
APOBP04114 UTY-214ENST00000617789 6682 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
APOBP04114 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
APOBP04114 LAMA1-201ENST00000389658 9657 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
APOBP04114 GALR1-201ENST00000299727 10044 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
APOBP04114 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC3.27□□□□□ -1.89
APOBP04114 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
APOBP04114 CYFIP1-208ENST00000617928 6793 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
APOBP04114 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC3.27□□□□□ -1.89
APOBP04114 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
APOBP04114 KIAA1671-206ENST00000637069 6510 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
APOBP04114 AC016705.2-202ENST00000559008 6878 ntTSL 3 BASIC3.27□□□□□ -1.89
APOBP04114 FZD10-AS1-201ENST00000505807 10193 ntTSL 2 BASIC3.27□□□□□ -1.89
APOBP04114 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
APOBP04114 THADA-206ENST00000405006 6310 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
APOBP04114 AC009480.2-201ENST00000422916 432 ntBASIC3.27□□□□□ -1.89
APOBP04114 RPL12P34-201ENST00000424532 479 ntBASIC3.27□□□□□ -1.89
APOBP04114 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC3.27□□□□□ -1.89
APOBP04114 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
APOBP04114 AL359073.1-201ENST00000448036 403 ntBASIC3.27□□□□□ -1.89
APOBP04114 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC3.27□□□□□ -1.89
APOBP04114 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.27□□□□□ -1.89
APOBP04114 AC058823.1-201ENST00000485315 474 ntBASIC3.27□□□□□ -1.89
APOBP04114 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
APOBP04114 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC3.27□□□□□ -1.89
APOBP04114 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
APOBP04114 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
APOBP04114 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
APOBP04114 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC3.27□□□□□ -1.89
APOBP04114 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
APOBP04114 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
APOBP04114 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
APOBP04114 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC3.27□□□□□ -1.89
APOBP04114 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC3.27□□□□□ -1.89
APOBP04114 AP005131.7-201ENST00000610087 611 ntBASIC3.27□□□□□ -1.89
APOBP04114 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC3.27□□□□□ -1.89
APOBP04114 ZNF320-201ENST00000391781 6074 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
APOBP04114 PRDM2-203ENST00000343137 5797 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
APOBP04114 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
APOBP04114 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC3.26□□□□□ -1.89
APOBP04114 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC3.26□□□□□ -1.89
APOBP04114 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
APOBP04114 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
APOBP04114 SCYL3-202ENST00000367771 6364 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
APOBP04114 U3.30-201ENST00000391308 210 ntBASIC3.26□□□□□ -1.89
APOBP04114 SNORA11F-201ENST00000408237 128 ntBASIC3.26□□□□□ -1.89
APOBP04114 GPS2P1-201ENST00000411761 986 ntBASIC3.26□□□□□ -1.89
APOBP04114 HSPD1P12-201ENST00000429127 1069 ntBASIC3.26□□□□□ -1.89
APOBP04114 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.26□□□□□ -1.89
APOBP04114 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
APOBP04114 MIR4301-201ENST00000577203 66 ntBASIC3.26□□□□□ -1.89
APOBP04114 MIR4444-1-201ENST00000581696 74 ntBASIC3.26□□□□□ -1.89
APOBP04114 MIR4444-2-201ENST00000584390 74 ntBASIC3.26□□□□□ -1.89
APOBP04114 AP003789.1-201ENST00000617737 605 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms