Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 PANDAR-201ENST00000629595 1506 ntBASIC5.13□□□□□ -1.59
SPTA1P02549 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
SPTA1P02549 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
SPTA1P02549 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SPTA1P02549 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC5.13□□□□□ -1.59
SPTA1P02549 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.13□□□□□ -1.59
SPTA1P02549 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SPTA1P02549 AL133482.1-201ENST00000415988 498 ntBASIC5.13□□□□□ -1.59
SPTA1P02549 AC019050.1-201ENST00000418508 492 ntBASIC5.13□□□□□ -1.59
SPTA1P02549 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC5.13□□□□□ -1.59
SPTA1P02549 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC5.13□□□□□ -1.59
SPTA1P02549 NPM1P27-201ENST00000502784 830 ntBASIC5.13□□□□□ -1.59
SPTA1P02549 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.13□□□□□ -1.59
SPTA1P02549 RNA5SP400-201ENST00000517155 111 ntBASIC5.13□□□□□ -1.59
SPTA1P02549 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.13□□□□□ -1.59
SPTA1P02549 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.13□□□□□ -1.59
SPTA1P02549 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
SPTA1P02549 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SPTA1P02549 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
SPTA1P02549 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.13□□□□□ -1.59
SPTA1P02549 AL162431.4-201ENST00000604674 411 ntBASIC5.13□□□□□ -1.59
SPTA1P02549 AL353662.3-201ENST00000625131 237 ntBASIC5.13□□□□□ -1.59
SPTA1P02549 AC087516.1-201ENST00000561236 2428 ntBASIC5.13□□□□□ -1.59
SPTA1P02549 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.13□□□□□ -1.59
SPTA1P02549 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.13□□□□□ -1.59
SPTA1P02549 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
SPTA1P02549 AC022905.1-201ENST00000503430 3048 ntBASIC5.13□□□□□ -1.59
SPTA1P02549 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.13□□□□□ -1.59
SPTA1P02549 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SPTA1P02549 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SPTA1P02549 RNU1-32P-201ENST00000363937 159 ntBASIC5.13□□□□□ -1.59
SPTA1P02549 UBE2V1P14-201ENST00000415815 558 ntBASIC5.13□□□□□ -1.59
SPTA1P02549 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.13□□□□□ -1.59
SPTA1P02549 AL389915.1-201ENST00000422463 466 ntBASIC5.13□□□□□ -1.59
SPTA1P02549 AL139415.1-201ENST00000424862 352 ntBASIC5.13□□□□□ -1.59
SPTA1P02549 KCTD10P1-201ENST00000434203 625 ntBASIC5.13□□□□□ -1.59
SPTA1P02549 FRG2FP-204ENST00000453982 852 ntBASIC5.13□□□□□ -1.59
SPTA1P02549 AC109462.1-201ENST00000491087 368 ntBASIC5.13□□□□□ -1.59
SPTA1P02549 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.13□□□□□ -1.59
SPTA1P02549 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.13□□□□□ -1.59
SPTA1P02549 AP002981.1-201ENST00000517692 975 ntBASIC5.13□□□□□ -1.59
SPTA1P02549 IGKV2-23-201ENST00000518729 323 ntBASIC5.13□□□□□ -1.59
SPTA1P02549 OR11J2P-201ENST00000555298 907 ntBASIC5.13□□□□□ -1.59
SPTA1P02549 MIR4675-201ENST00000577898 77 ntBASIC5.13□□□□□ -1.59
SPTA1P02549 MIR3160-1-201ENST00000577972 85 ntBASIC5.13□□□□□ -1.59
SPTA1P02549 AC087283.1-201ENST00000604029 1074 ntBASIC5.13□□□□□ -1.59
SPTA1P02549 EIF3FP1-201ENST00000613970 806 ntBASIC5.13□□□□□ -1.59
SPTA1P02549 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
SPTA1P02549 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.13□□□□□ -1.59
SPTA1P02549 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.13□□□□□ -1.59
SPTA1P02549 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.13□□□□□ -1.59
SPTA1P02549 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SPTA1P02549 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
SPTA1P02549 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SPTA1P02549 AC005005.4-201ENST00000623789 16698 ntBASIC5.12□□□□□ -1.59
SPTA1P02549 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
SPTA1P02549 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.12□□□□□ -1.59
SPTA1P02549 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
SPTA1P02549 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.12□□□□□ -1.59
SPTA1P02549 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SPTA1P02549 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SPTA1P02549 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SPTA1P02549 RNU1-77P-201ENST00000390868 162 ntBASIC5.12□□□□□ -1.59
SPTA1P02549 RNA5SP44-201ENST00000410446 133 ntBASIC5.12□□□□□ -1.59
SPTA1P02549 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.12□□□□□ -1.59
SPTA1P02549 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.12□□□□□ -1.59
SPTA1P02549 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.12□□□□□ -1.59
SPTA1P02549 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.12□□□□□ -1.59
SPTA1P02549 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC5.12□□□□□ -1.59
SPTA1P02549 RPL7AP28-201ENST00000464513 571 ntBASIC5.12□□□□□ -1.59
SPTA1P02549 RPL32P33-201ENST00000487023 394 ntBASIC5.12□□□□□ -1.59
SPTA1P02549 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.12□□□□□ -1.59
SPTA1P02549 TPM3P3-201ENST00000521343 354 ntBASIC5.12□□□□□ -1.59
SPTA1P02549 MIR4311-201ENST00000580794 100 ntBASIC5.12□□□□□ -1.59
SPTA1P02549 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.12□□□□□ -1.59
SPTA1P02549 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
SPTA1P02549 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SPTA1P02549 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC5.12□□□□□ -1.59
SPTA1P02549 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SPTA1P02549 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SPTA1P02549 AC008937.3-201ENST00000606813 1700 ntBASIC5.12□□□□□ -1.59
SPTA1P02549 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.12□□□□□ -1.59
SPTA1P02549 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.12□□□□□ -1.59
SPTA1P02549 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SPTA1P02549 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
SPTA1P02549 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.12□□□□□ -1.59
SPTA1P02549 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.12□□□□□ -1.59
SPTA1P02549 RPS6P23-201ENST00000413224 722 ntBASIC5.12□□□□□ -1.59
SPTA1P02549 AC097721.1-201ENST00000427150 1253 ntBASIC5.12□□□□□ -1.59
SPTA1P02549 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.12□□□□□ -1.59
SPTA1P02549 FAM96AP1-201ENST00000430879 482 ntBASIC5.12□□□□□ -1.59
SPTA1P02549 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.12□□□□□ -1.59
SPTA1P02549 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.12□□□□□ -1.59
SPTA1P02549 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.12□□□□□ -1.59
SPTA1P02549 OR4A2P-201ENST00000527276 913 ntBASIC5.12□□□□□ -1.59
SPTA1P02549 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SPTA1P02549 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.12□□□□□ -1.59
SPTA1P02549 AC019193.2-201ENST00000610012 634 ntBASIC5.12□□□□□ -1.59
SPTA1P02549 AL445647.2-201ENST00000615170 130 ntBASIC5.12□□□□□ -1.59
SPTA1P02549 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms