Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
LDLRP01130 RNU6-386P-201ENST00000362650 107 ntBASIC5.66□□□□□ -1.5
LDLRP01130 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
LDLRP01130 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
LDLRP01130 AL391361.1-201ENST00000405580 489 ntBASIC5.66□□□□□ -1.5
LDLRP01130 RN7SKP293-201ENST00000411389 296 ntBASIC5.66□□□□□ -1.5
LDLRP01130 AL513325.1-201ENST00000417716 1034 ntBASIC5.66□□□□□ -1.5
LDLRP01130 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.66□□□□□ -1.5
LDLRP01130 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.66□□□□□ -1.5
LDLRP01130 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.66□□□□□ -1.5
LDLRP01130 OR52Y1P-201ENST00000452418 828 ntBASIC5.66□□□□□ -1.5
LDLRP01130 MTND2P3-201ENST00000452458 470 ntBASIC5.66□□□□□ -1.5
LDLRP01130 TPRKBP1-201ENST00000456243 481 ntBASIC5.66□□□□□ -1.5
LDLRP01130 RPS27AP2-201ENST00000457576 465 ntBASIC5.66□□□□□ -1.5
LDLRP01130 ACA64.4-201ENST00000459070 127 ntBASIC5.66□□□□□ -1.5
LDLRP01130 AC089999.1-201ENST00000460336 374 ntBASIC5.66□□□□□ -1.5
LDLRP01130 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LDLRP01130 RN7SL326P-201ENST00000477493 296 ntBASIC5.66□□□□□ -1.5
LDLRP01130 PDCL3P4-201ENST00000489621 720 ntBASIC5.66□□□□□ -1.5
LDLRP01130 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LDLRP01130 GLUD1P3-202ENST00000508551 200 ntBASIC5.66□□□□□ -1.5
LDLRP01130 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LDLRP01130 RN7SKP288-201ENST00000516227 268 ntBASIC5.66□□□□□ -1.5
LDLRP01130 KCTD9P6-201ENST00000522306 950 ntBASIC5.66□□□□□ -1.5
LDLRP01130 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.66□□□□□ -1.5
LDLRP01130 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
LDLRP01130 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LDLRP01130 RPA2P1-201ENST00000556557 721 ntBASIC5.66□□□□□ -1.5
LDLRP01130 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.66□□□□□ -1.5
LDLRP01130 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.66□□□□□ -1.5
LDLRP01130 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.66□□□□□ -1.5
LDLRP01130 AC068768.2-201ENST00000602352 343 ntBASIC5.66□□□□□ -1.5
LDLRP01130 AC005520.3-201ENST00000602874 370 ntBASIC5.66□□□□□ -1.5
LDLRP01130 AC022387.2-201ENST00000604050 448 ntBASIC5.66□□□□□ -1.5
LDLRP01130 KATNBL1P1-201ENST00000605192 748 ntBASIC5.66□□□□□ -1.5
LDLRP01130 AC211433.2-201ENST00000608433 387 ntBASIC5.66□□□□□ -1.5
LDLRP01130 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
LDLRP01130 RNA5SP440-201ENST00000612665 119 ntBASIC5.66□□□□□ -1.5
LDLRP01130 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LDLRP01130 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.66□□□□□ -1.5
LDLRP01130 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.66□□□□□ -1.5
LDLRP01130 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.66□□□□□ -1.5
LDLRP01130 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LDLRP01130 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LDLRP01130 AC022325.1-201ENST00000502748 2199 ntBASIC5.66□□□□□ -1.5
LDLRP01130 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
LDLRP01130 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LDLRP01130 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.66□□□□□ -1.5
LDLRP01130 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
LDLRP01130 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
LDLRP01130 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LDLRP01130 RBPJP7-201ENST00000442803 1447 ntBASIC5.65□□□□□ -1.5
LDLRP01130 RBPJP5-201ENST00000449433 1447 ntBASIC5.65□□□□□ -1.5
LDLRP01130 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
LDLRP01130 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
LDLRP01130 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
LDLRP01130 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
LDLRP01130 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
LDLRP01130 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
LDLRP01130 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
LDLRP01130 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
LDLRP01130 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
LDLRP01130 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
LDLRP01130 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
LDLRP01130 SNORA58B-201ENST00000364259 136 ntBASIC5.65□□□□□ -1.5
LDLRP01130 MIR105-2-201ENST00000385083 81 ntBASIC5.65□□□□□ -1.5
LDLRP01130 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
LDLRP01130 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.65□□□□□ -1.5
LDLRP01130 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.65□□□□□ -1.5
LDLRP01130 AC130360.1-201ENST00000425489 1117 ntBASIC5.65□□□□□ -1.5
LDLRP01130 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.65□□□□□ -1.5
LDLRP01130 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.65□□□□□ -1.5
LDLRP01130 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.65□□□□□ -1.5
LDLRP01130 AC138761.5-201ENST00000433967 325 ntBASIC5.65□□□□□ -1.5
LDLRP01130 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC5.65□□□□□ -1.5
LDLRP01130 UBFD1P1-201ENST00000473259 814 ntBASIC5.65□□□□□ -1.5
LDLRP01130 RN7SL369P-201ENST00000477138 299 ntBASIC5.65□□□□□ -1.5
LDLRP01130 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC5.65□□□□□ -1.5
LDLRP01130 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.65□□□□□ -1.5
LDLRP01130 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.65□□□□□ -1.5
LDLRP01130 OR4D12P-201ENST00000509361 911 ntBASIC5.65□□□□□ -1.5
LDLRP01130 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
LDLRP01130 RNA5SP438-201ENST00000516561 112 ntBASIC5.65□□□□□ -1.5
LDLRP01130 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.65□□□□□ -1.5
LDLRP01130 AC130365.2-201ENST00000525882 1201 ntBASIC5.65□□□□□ -1.5
LDLRP01130 AP001858.2-201ENST00000536213 601 ntBASIC5.65□□□□□ -1.5
LDLRP01130 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.65□□□□□ -1.5
LDLRP01130 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.65□□□□□ -1.5
LDLRP01130 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.65□□□□□ -1.5
LDLRP01130 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.65□□□□□ -1.5
LDLRP01130 AC007346.2-201ENST00000564816 892 ntBASIC5.65□□□□□ -1.5
LDLRP01130 AC092121.1-201ENST00000569452 202 ntBASIC5.65□□□□□ -1.5
LDLRP01130 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.65□□□□□ -1.5
LDLRP01130 AC141002.1-201ENST00000607025 279 ntBASIC5.65□□□□□ -1.5
LDLRP01130 AL158211.2-201ENST00000607282 395 ntBASIC5.65□□□□□ -1.5
LDLRP01130 RNU6-84P-201ENST00000607737 102 ntBASIC5.65□□□□□ -1.5
LDLRP01130 AC007620.3-201ENST00000608131 497 ntBASIC5.65□□□□□ -1.5
LDLRP01130 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.65□□□□□ -1.5
LDLRP01130 AC004948.1-201ENST00000609858 672 ntBASIC5.65□□□□□ -1.5
LDLRP01130 AL136295.6-201ENST00000610486 658 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms