Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CLPTM1O96005 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLPTM1O96005 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CLPTM1O96005 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CLPTM1O96005 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CLPTM1O96005 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CLPTM1O96005 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.4□□□□□ -1.54
CLPTM1O96005 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CLPTM1O96005 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CLPTM1O96005 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CLPTM1O96005 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CLPTM1O96005 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CLPTM1O96005 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CLPTM1O96005 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.4□□□□□ -1.54
CLPTM1O96005 RNU4-23P-201ENST00000362839 140 ntBASIC5.4□□□□□ -1.54
CLPTM1O96005 RNU1-146P-201ENST00000364015 165 ntBASIC5.4□□□□□ -1.54
CLPTM1O96005 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.4□□□□□ -1.54
CLPTM1O96005 U3.28-201ENST00000391249 210 ntBASIC5.4□□□□□ -1.54
CLPTM1O96005 AL136116.2-201ENST00000404020 785 ntBASIC5.4□□□□□ -1.54
CLPTM1O96005 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.4□□□□□ -1.54
CLPTM1O96005 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CLPTM1O96005 SETP10-201ENST00000424368 814 ntBASIC5.4□□□□□ -1.54
CLPTM1O96005 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.4□□□□□ -1.54
CLPTM1O96005 TRGV7-201ENST00000427089 353 ntBASIC5.4□□□□□ -1.54
CLPTM1O96005 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.4□□□□□ -1.54
CLPTM1O96005 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.4□□□□□ -1.54
CLPTM1O96005 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.4□□□□□ -1.54
CLPTM1O96005 AL645936.1-201ENST00000441979 518 ntBASIC5.4□□□□□ -1.54
CLPTM1O96005 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CLPTM1O96005 AL513343.1-201ENST00000451818 792 ntBASIC5.4□□□□□ -1.54
CLPTM1O96005 SDC4P-201ENST00000453285 601 ntBASIC5.4□□□□□ -1.54
CLPTM1O96005 AC118758.1-202ENST00000454719 225 ntBASIC5.4□□□□□ -1.54
CLPTM1O96005 TPRKBP1-201ENST00000456243 481 ntBASIC5.4□□□□□ -1.54
CLPTM1O96005 AC019084.1-201ENST00000457337 432 ntBASIC5.4□□□□□ -1.54
CLPTM1O96005 RWDD4P1-201ENST00000488019 565 ntBASIC5.4□□□□□ -1.54
CLPTM1O96005 AC021006.1-201ENST00000489849 553 ntBASIC5.4□□□□□ -1.54
CLPTM1O96005 AL049874.2-201ENST00000492636 288 ntBASIC5.4□□□□□ -1.54
CLPTM1O96005 SNX18P24-201ENST00000505249 671 ntBASIC5.4□□□□□ -1.54
CLPTM1O96005 AC018797.1-201ENST00000510791 255 ntBASIC5.4□□□□□ -1.54
CLPTM1O96005 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.4□□□□□ -1.54
CLPTM1O96005 RNA5SP473-201ENST00000516402 125 ntBASIC5.4□□□□□ -1.54
CLPTM1O96005 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.4□□□□□ -1.54
CLPTM1O96005 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.4□□□□□ -1.54
CLPTM1O96005 AC127024.5-201ENST00000580085 462 ntBASIC5.4□□□□□ -1.54
CLPTM1O96005 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC5.4□□□□□ -1.54
CLPTM1O96005 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.4□□□□□ -1.54
CLPTM1O96005 AC245128.3-201ENST00000594721 748 ntBASIC5.4□□□□□ -1.54
CLPTM1O96005 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.4□□□□□ -1.54
CLPTM1O96005 SNORA74.4-201ENST00000607595 199 ntBASIC5.4□□□□□ -1.54
CLPTM1O96005 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC5.4□□□□□ -1.54
CLPTM1O96005 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CLPTM1O96005 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CLPTM1O96005 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.4□□□□□ -1.55
CLPTM1O96005 AC112198.2-201ENST00000426589 6996 ntBASIC5.4□□□□□ -1.55
CLPTM1O96005 AC104260.2-201ENST00000623551 3497 ntBASIC5.4□□□□□ -1.55
CLPTM1O96005 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
CLPTM1O96005 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CLPTM1O96005 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CLPTM1O96005 AC083899.1-201ENST00000454465 3819 ntBASIC5.39□□□□□ -1.55
CLPTM1O96005 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CLPTM1O96005 AC104964.3-201ENST00000606115 2860 ntBASIC5.39□□□□□ -1.55
CLPTM1O96005 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CLPTM1O96005 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLPTM1O96005 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.39□□□□□ -1.55
CLPTM1O96005 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.39□□□□□ -1.55
CLPTM1O96005 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.39□□□□□ -1.55
CLPTM1O96005 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.39□□□□□ -1.55
CLPTM1O96005 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CLPTM1O96005 OR7E25P-201ENST00000344844 931 ntBASIC5.39□□□□□ -1.55
CLPTM1O96005 RNU1-65P-201ENST00000363919 148 ntBASIC5.39□□□□□ -1.55
CLPTM1O96005 RBBP4P5-201ENST00000398583 1266 ntBASIC5.39□□□□□ -1.55
CLPTM1O96005 SNORA79B-201ENST00000410557 148 ntBASIC5.39□□□□□ -1.55
CLPTM1O96005 AC211486.3-201ENST00000412694 621 ntBASIC5.39□□□□□ -1.55
CLPTM1O96005 AL035422.1-201ENST00000414193 397 ntBASIC5.39□□□□□ -1.55
CLPTM1O96005 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.39□□□□□ -1.55
CLPTM1O96005 RPL24P2-201ENST00000421023 475 ntBASIC5.39□□□□□ -1.55
CLPTM1O96005 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.39□□□□□ -1.55
CLPTM1O96005 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.39□□□□□ -1.55
CLPTM1O96005 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.39□□□□□ -1.55
CLPTM1O96005 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CLPTM1O96005 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CLPTM1O96005 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC5.39□□□□□ -1.55
CLPTM1O96005 LINC02210-201ENST00000444561 288 ntBASIC5.39□□□□□ -1.55
CLPTM1O96005 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.39□□□□□ -1.55
CLPTM1O96005 RN7SL168P-201ENST00000463821 279 ntBASIC5.39□□□□□ -1.55
CLPTM1O96005 PFN1P6-201ENST00000476786 399 ntBASIC5.39□□□□□ -1.55
CLPTM1O96005 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.39□□□□□ -1.55
CLPTM1O96005 RPL12P30-201ENST00000488389 499 ntBASIC5.39□□□□□ -1.55
CLPTM1O96005 AC095052.1-201ENST00000509955 863 ntBASIC5.39□□□□□ -1.55
CLPTM1O96005 AC021146.10-201ENST00000515628 706 ntBASIC5.39□□□□□ -1.55
CLPTM1O96005 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.39□□□□□ -1.55
CLPTM1O96005 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.39□□□□□ -1.55
CLPTM1O96005 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.39□□□□□ -1.55
CLPTM1O96005 AC024405.1-201ENST00000532521 1042 ntBASIC5.39□□□□□ -1.55
CLPTM1O96005 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.39□□□□□ -1.55
CLPTM1O96005 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.39□□□□□ -1.55
CLPTM1O96005 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.39□□□□□ -1.55
CLPTM1O96005 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.39□□□□□ -1.55
CLPTM1O96005 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.39□□□□□ -1.55
CLPTM1O96005 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms