Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 NDFIP2-206ENST00000620924 2324 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
UPK1BO75841 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
UPK1BO75841 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
UPK1BO75841 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
UPK1BO75841 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
UPK1BO75841 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
UPK1BO75841 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
UPK1BO75841 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
UPK1BO75841 HIST1H3PS1-201ENST00000404612 417 ntBASIC4.69□□□□□ -1.66
UPK1BO75841 RPS6P23-201ENST00000413224 722 ntBASIC4.69□□□□□ -1.66
UPK1BO75841 AL391869.1-201ENST00000414581 475 ntTSL 3 BASIC4.69□□□□□ -1.66
UPK1BO75841 E2F6P2-201ENST00000420708 748 ntBASIC4.69□□□□□ -1.66
UPK1BO75841 AC007161.1-204ENST00000423039 460 ntBASIC4.69□□□□□ -1.66
UPK1BO75841 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC4.69□□□□□ -1.66
UPK1BO75841 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
UPK1BO75841 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC4.69□□□□□ -1.66
UPK1BO75841 TUBB4BP6-201ENST00000437576 479 ntBASIC4.69□□□□□ -1.66
UPK1BO75841 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.69□□□□□ -1.66
UPK1BO75841 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
UPK1BO75841 RN7SL269P-201ENST00000467795 305 ntBASIC4.69□□□□□ -1.66
UPK1BO75841 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC4.69□□□□□ -1.66
UPK1BO75841 RN7SL570P-201ENST00000484405 292 ntBASIC4.69□□□□□ -1.66
UPK1BO75841 RN7SL814P-201ENST00000487715 300 ntBASIC4.69□□□□□ -1.66
UPK1BO75841 RPL9P15-201ENST00000491096 532 ntBASIC4.69□□□□□ -1.66
UPK1BO75841 RPL34P29-201ENST00000491411 325 ntBASIC4.69□□□□□ -1.66
UPK1BO75841 AC111000.5-201ENST00000506559 1178 ntBASIC4.69□□□□□ -1.66
UPK1BO75841 DUTP7-201ENST00000507982 486 ntBASIC4.69□□□□□ -1.66
UPK1BO75841 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
UPK1BO75841 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.69□□□□□ -1.66
UPK1BO75841 HNRNPRP2-201ENST00000528421 743 ntBASIC4.69□□□□□ -1.66
UPK1BO75841 VDAC2P2-201ENST00000544463 901 ntBASIC4.69□□□□□ -1.66
UPK1BO75841 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.69□□□□□ -1.66
UPK1BO75841 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC4.69□□□□□ -1.66
UPK1BO75841 AC105243.1-202ENST00000583942 847 ntTSL 3 BASIC4.69□□□□□ -1.66
UPK1BO75841 EXOSC3P2-201ENST00000594464 497 ntBASIC4.69□□□□□ -1.66
UPK1BO75841 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC4.69□□□□□ -1.66
UPK1BO75841 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.69□□□□□ -1.66
UPK1BO75841 SMIM12P1-201ENST00000603004 274 ntBASIC4.69□□□□□ -1.66
UPK1BO75841 PRR13P3-201ENST00000603578 376 ntBASIC4.69□□□□□ -1.66
UPK1BO75841 AC233280.2-201ENST00000603917 1070 ntBASIC4.69□□□□□ -1.66
UPK1BO75841 RNU6-84P-201ENST00000607737 102 ntBASIC4.69□□□□□ -1.66
UPK1BO75841 AC097505.1-201ENST00000610199 565 ntBASIC4.69□□□□□ -1.66
UPK1BO75841 RFPL4AP6-201ENST00000616792 846 ntBASIC4.69□□□□□ -1.66
UPK1BO75841 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC4.69□□□□□ -1.66
UPK1BO75841 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC4.69□□□□□ -1.66
UPK1BO75841 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
UPK1BO75841 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
UPK1BO75841 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
UPK1BO75841 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
UPK1BO75841 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.69□□□□□ -1.66
UPK1BO75841 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC4.69□□□□□ -1.66
UPK1BO75841 LINC01355-201ENST00000566551 5444 ntBASIC4.69□□□□□ -1.66
UPK1BO75841 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
UPK1BO75841 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.69□□□□□ -1.66
UPK1BO75841 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
UPK1BO75841 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
UPK1BO75841 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.68□□□□□ -1.66
UPK1BO75841 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
UPK1BO75841 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
UPK1BO75841 CASC19-221ENST00000641309 1382 ntBASIC4.68□□□□□ -1.66
UPK1BO75841 AC120338.1-201ENST00000625074 1541 ntBASIC4.68□□□□□ -1.66
UPK1BO75841 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
UPK1BO75841 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
UPK1BO75841 AC097461.1-201ENST00000568928 2821 ntBASIC4.68□□□□□ -1.66
UPK1BO75841 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
UPK1BO75841 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
UPK1BO75841 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC4.68□□□□□ -1.66
UPK1BO75841 RNU4-44P-201ENST00000363050 141 ntBASIC4.68□□□□□ -1.66
UPK1BO75841 AC016739.1-201ENST00000405359 345 ntBASIC4.68□□□□□ -1.66
UPK1BO75841 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC4.68□□□□□ -1.66
UPK1BO75841 CYCSP10-201ENST00000417973 294 ntBASIC4.68□□□□□ -1.66
UPK1BO75841 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC4.68□□□□□ -1.66
UPK1BO75841 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC4.68□□□□□ -1.66
UPK1BO75841 ELOBP4-201ENST00000423418 296 ntBASIC4.68□□□□□ -1.66
UPK1BO75841 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.68□□□□□ -1.66
UPK1BO75841 AL645936.1-201ENST00000441979 518 ntBASIC4.68□□□□□ -1.66
UPK1BO75841 AL590004.3-202ENST00000445883 451 ntBASIC4.68□□□□□ -1.66
UPK1BO75841 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC4.68□□□□□ -1.66
UPK1BO75841 AC022133.1-201ENST00000490961 571 ntBASIC4.68□□□□□ -1.66
UPK1BO75841 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC4.68□□□□□ -1.66
UPK1BO75841 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC4.68□□□□□ -1.66
UPK1BO75841 AL671862.1-201ENST00000515851 349 ntBASIC4.68□□□□□ -1.66
UPK1BO75841 AC027308.1-201ENST00000517993 110 ntBASIC4.68□□□□□ -1.66
UPK1BO75841 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.68□□□□□ -1.66
UPK1BO75841 MAL2-207ENST00000522828 603 ntTSL 3 BASIC4.68□□□□□ -1.66
UPK1BO75841 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.68□□□□□ -1.66
UPK1BO75841 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC4.68□□□□□ -1.66
UPK1BO75841 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC4.68□□□□□ -1.66
UPK1BO75841 AC010542.3-202ENST00000561728 701 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
UPK1BO75841 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
UPK1BO75841 AP006587.6-201ENST00000582128 1091 ntBASIC4.68□□□□□ -1.66
UPK1BO75841 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.68□□□□□ -1.66
UPK1BO75841 AC087283.1-201ENST00000604029 1074 ntBASIC4.68□□□□□ -1.66
UPK1BO75841 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC4.68□□□□□ -1.66
UPK1BO75841 AC018695.5-201ENST00000605872 315 ntBASIC4.68□□□□□ -1.66
UPK1BO75841 AC068631.1-255ENST00000608173 588 ntTSL 5 BASIC4.68□□□□□ -1.66
UPK1BO75841 AC016252.1-201ENST00000609721 474 ntBASIC4.68□□□□□ -1.66
UPK1BO75841 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
UPK1BO75841 uc_338.33-201ENST00000614988 170 ntBASIC4.68□□□□□ -1.66
UPK1BO75841 AC010320.5-201ENST00000619124 676 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms