Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AC245014.3-201ENST00000618589 347 ntBASIC4.41□□□□□ -1.7
SSSCA1O60232 AC022919.1-201ENST00000624979 626 ntBASIC4.41□□□□□ -1.7
SSSCA1O60232 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC4.41□□□□□ -1.7
SSSCA1O60232 HSPD1P9-201ENST00000420325 1636 ntBASIC4.41□□□□□ -1.7
SSSCA1O60232 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SSSCA1O60232 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.41□□□□□ -1.7
SSSCA1O60232 HSPA8P14-201ENST00000552265 1805 ntBASIC4.41□□□□□ -1.7
SSSCA1O60232 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
SSSCA1O60232 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SSSCA1O60232 AC006600.2-201ENST00000624834 2506 ntBASIC4.41□□□□□ -1.7
SSSCA1O60232 AL162456.1-201ENST00000634535 2006 ntBASIC4.41□□□□□ -1.7
SSSCA1O60232 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.41□□□□□ -1.7
SSSCA1O60232 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.4□□□□□ -1.7
SSSCA1O60232 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
SSSCA1O60232 AL354854.1-201ENST00000455940 1363 ntBASIC4.4□□□□□ -1.7
SSSCA1O60232 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.4□□□□□ -1.7
SSSCA1O60232 AF287957.1-201ENST00000607368 1595 ntBASIC4.4□□□□□ -1.7
SSSCA1O60232 AP001157.1-201ENST00000550837 2339 ntBASIC4.4□□□□□ -1.7
SSSCA1O60232 AC100778.3-201ENST00000580060 1750 ntBASIC4.4□□□□□ -1.7
SSSCA1O60232 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.7
SSSCA1O60232 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
SSSCA1O60232 SMG1P7-201ENST00000565246 2704 ntBASIC4.4□□□□□ -1.7
SSSCA1O60232 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC4.4□□□□□ -1.7
SSSCA1O60232 AC079298.1-201ENST00000625026 1619 ntBASIC4.4□□□□□ -1.7
SSSCA1O60232 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SSSCA1O60232 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SSSCA1O60232 RNU1-19P-201ENST00000363306 165 ntBASIC4.4□□□□□ -1.71
SSSCA1O60232 RNA5SP500-201ENST00000364486 119 ntBASIC4.4□□□□□ -1.71
SSSCA1O60232 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.4□□□□□ -1.71
SSSCA1O60232 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SSSCA1O60232 YWHAZP6-201ENST00000399764 738 ntBASIC4.4□□□□□ -1.71
SSSCA1O60232 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC4.4□□□□□ -1.71
SSSCA1O60232 NPM1P40-201ENST00000412758 733 ntBASIC4.4□□□□□ -1.71
SSSCA1O60232 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC4.4□□□□□ -1.71
SSSCA1O60232 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC4.4□□□□□ -1.71
SSSCA1O60232 AK4P4-201ENST00000419465 646 ntBASIC4.4□□□□□ -1.71
SSSCA1O60232 AC007161.1-204ENST00000423039 460 ntBASIC4.4□□□□□ -1.71
SSSCA1O60232 AKR1B10P1-201ENST00000425765 942 ntBASIC4.4□□□□□ -1.71
SSSCA1O60232 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC4.4□□□□□ -1.71
SSSCA1O60232 AC006335.2-201ENST00000437993 330 ntBASIC4.4□□□□□ -1.71
SSSCA1O60232 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC4.4□□□□□ -1.71
SSSCA1O60232 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC4.4□□□□□ -1.71
SSSCA1O60232 AL450023.1-201ENST00000450868 751 ntBASIC4.4□□□□□ -1.71
SSSCA1O60232 HMGB1P7-201ENST00000450921 612 ntBASIC4.4□□□□□ -1.71
SSSCA1O60232 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC4.4□□□□□ -1.71
SSSCA1O60232 RPSAP37-201ENST00000470913 821 ntBASIC4.4□□□□□ -1.71
SSSCA1O60232 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SSSCA1O60232 NIFKP7-201ENST00000503365 834 ntBASIC4.4□□□□□ -1.71
SSSCA1O60232 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.4□□□□□ -1.71
SSSCA1O60232 SCARNA18.1-201ENST00000516330 83 ntBASIC4.4□□□□□ -1.71
SSSCA1O60232 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.4□□□□□ -1.71
SSSCA1O60232 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC4.4□□□□□ -1.71
SSSCA1O60232 OR8A2P-201ENST00000528631 952 ntBASIC4.4□□□□□ -1.71
SSSCA1O60232 OLR1-209ENST00000543993 822 ntTSL 2 BASIC4.4□□□□□ -1.71
SSSCA1O60232 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SSSCA1O60232 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SSSCA1O60232 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.4□□□□□ -1.71
SSSCA1O60232 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.4□□□□□ -1.71
SSSCA1O60232 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC4.4□□□□□ -1.71
SSSCA1O60232 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.4□□□□□ -1.71
SSSCA1O60232 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC4.4□□□□□ -1.71
SSSCA1O60232 WBP1LP12-201ENST00000604449 331 ntBASIC4.4□□□□□ -1.71
SSSCA1O60232 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SSSCA1O60232 AL365181.4-201ENST00000609800 547 ntBASIC4.4□□□□□ -1.71
SSSCA1O60232 AC244107.2-201ENST00000611773 76 ntBASIC4.4□□□□□ -1.71
SSSCA1O60232 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.4□□□□□ -1.71
SSSCA1O60232 AC099654.6-201ENST00000636487 512 ntBASIC4.4□□□□□ -1.71
SSSCA1O60232 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC4.4□□□□□ -1.71
SSSCA1O60232 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC4.4□□□□□ -1.71
SSSCA1O60232 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
SSSCA1O60232 AC006484.1-201ENST00000435086 1884 ntBASIC4.4□□□□□ -1.71
SSSCA1O60232 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.71
SSSCA1O60232 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
SSSCA1O60232 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
SSSCA1O60232 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SSSCA1O60232 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SSSCA1O60232 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
SSSCA1O60232 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SSSCA1O60232 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SSSCA1O60232 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SSSCA1O60232 CASC19-248ENST00000641674 1356 ntBASIC4.4□□□□□ -1.71
SSSCA1O60232 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
SSSCA1O60232 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SSSCA1O60232 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
SSSCA1O60232 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.39□□□□□ -1.71
SSSCA1O60232 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.39□□□□□ -1.71
SSSCA1O60232 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.39□□□□□ -1.71
SSSCA1O60232 OR9G4-201ENST00000302957 984 ntBASIC4.39□□□□□ -1.71
SSSCA1O60232 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SSSCA1O60232 RNFT1P3-201ENST00000340898 1052 ntBASIC4.39□□□□□ -1.71
SSSCA1O60232 SNORA51.9-201ENST00000384295 124 ntBASIC4.39□□□□□ -1.71
SSSCA1O60232 MIR431-201ENST00000385266 114 ntBASIC4.39□□□□□ -1.71
SSSCA1O60232 BX284632.2-201ENST00000421091 399 ntBASIC4.39□□□□□ -1.71
SSSCA1O60232 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.39□□□□□ -1.71
SSSCA1O60232 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.39□□□□□ -1.71
SSSCA1O60232 AL022324.2-201ENST00000434827 780 ntBASIC4.39□□□□□ -1.71
SSSCA1O60232 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.39□□□□□ -1.71
SSSCA1O60232 AL512605.1-202ENST00000441919 381 ntBASIC4.39□□□□□ -1.71
SSSCA1O60232 RPL6P30-201ENST00000443382 862 ntBASIC4.39□□□□□ -1.71
SSSCA1O60232 CYCSP24-201ENST00000445119 316 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms