Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
UPK1AO00322 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
UPK1AO00322 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
UPK1AO00322 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.23□□□□□ -1.57
UPK1AO00322 AC010266.2-201ENST00000564741 3255 ntBASIC5.23□□□□□ -1.57
UPK1AO00322 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
UPK1AO00322 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
UPK1AO00322 BCORP1-203ENST00000513194 5093 ntBASIC5.23□□□□□ -1.57
UPK1AO00322 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
UPK1AO00322 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.23□□□□□ -1.57
UPK1AO00322 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
UPK1AO00322 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
UPK1AO00322 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.23□□□□□ -1.57
UPK1AO00322 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC5.23□□□□□ -1.57
UPK1AO00322 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
UPK1AO00322 MIR621-201ENST00000384919 96 ntBASIC5.23□□□□□ -1.57
UPK1AO00322 RNA5SP241-201ENST00000391326 114 ntBASIC5.23□□□□□ -1.57
UPK1AO00322 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.23□□□□□ -1.57
UPK1AO00322 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.23□□□□□ -1.57
UPK1AO00322 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.23□□□□□ -1.57
UPK1AO00322 AC006335.2-201ENST00000437993 330 ntBASIC5.23□□□□□ -1.57
UPK1AO00322 AC005297.1-201ENST00000444765 862 ntBASIC5.23□□□□□ -1.57
UPK1AO00322 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
UPK1AO00322 AC090804.1-201ENST00000448870 490 ntBASIC5.23□□□□□ -1.57
UPK1AO00322 AC094085.1-201ENST00000468914 584 ntBASIC5.23□□□□□ -1.57
UPK1AO00322 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.23□□□□□ -1.57
UPK1AO00322 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.23□□□□□ -1.57
UPK1AO00322 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.23□□□□□ -1.57
UPK1AO00322 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
UPK1AO00322 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.23□□□□□ -1.57
UPK1AO00322 AC092709.1-201ENST00000521355 1045 ntBASIC5.23□□□□□ -1.57
UPK1AO00322 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.23□□□□□ -1.57
UPK1AO00322 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.23□□□□□ -1.57
UPK1AO00322 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.23□□□□□ -1.57
UPK1AO00322 RN7SL290P-201ENST00000578661 300 ntBASIC5.23□□□□□ -1.57
UPK1AO00322 AC100767.2-201ENST00000604840 693 ntBASIC5.23□□□□□ -1.57
UPK1AO00322 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.23□□□□□ -1.57
UPK1AO00322 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.23□□□□□ -1.57
UPK1AO00322 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC5.23□□□□□ -1.57
UPK1AO00322 MIR193BHG-214ENST00000641765 509 ntBASIC5.23□□□□□ -1.57
UPK1AO00322 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
UPK1AO00322 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
UPK1AO00322 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
UPK1AO00322 AC100757.1-201ENST00000616872 1835 ntBASIC5.23□□□□□ -1.57
UPK1AO00322 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
UPK1AO00322 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.22□□□□□ -1.57
UPK1AO00322 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
UPK1AO00322 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
UPK1AO00322 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
UPK1AO00322 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
UPK1AO00322 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
UPK1AO00322 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
UPK1AO00322 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
UPK1AO00322 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.22□□□□□ -1.57
UPK1AO00322 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.22□□□□□ -1.57
UPK1AO00322 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.22□□□□□ -1.57
UPK1AO00322 AL009179.1-201ENST00000406085 265 ntBASIC5.22□□□□□ -1.57
UPK1AO00322 EEF1B2P8-201ENST00000414101 671 ntBASIC5.22□□□□□ -1.57
UPK1AO00322 AC093155.2-201ENST00000420734 937 ntBASIC5.22□□□□□ -1.57
UPK1AO00322 RPS3P2-201ENST00000421346 701 ntBASIC5.22□□□□□ -1.57
UPK1AO00322 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
UPK1AO00322 AL662874.1-201ENST00000426065 230 ntBASIC5.22□□□□□ -1.57
UPK1AO00322 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
UPK1AO00322 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.22□□□□□ -1.57
UPK1AO00322 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.22□□□□□ -1.57
UPK1AO00322 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.22□□□□□ -1.57
UPK1AO00322 OR52E3P-201ENST00000452083 936 ntBASIC5.22□□□□□ -1.57
UPK1AO00322 LRRC37A14P-201ENST00000452297 462 ntBASIC5.22□□□□□ -1.57
UPK1AO00322 OR52E7P-201ENST00000452394 933 ntBASIC5.22□□□□□ -1.57
UPK1AO00322 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.22□□□□□ -1.57
UPK1AO00322 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
UPK1AO00322 ENPP7P11-201ENST00000505915 627 ntBASIC5.22□□□□□ -1.57
UPK1AO00322 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.22□□□□□ -1.57
UPK1AO00322 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.22□□□□□ -1.57
UPK1AO00322 AC016559.2-201ENST00000510759 359 ntBASIC5.22□□□□□ -1.57
UPK1AO00322 SNORA43.3-201ENST00000517240 103 ntBASIC5.22□□□□□ -1.57
UPK1AO00322 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.22□□□□□ -1.57
UPK1AO00322 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.22□□□□□ -1.57
UPK1AO00322 IGBP1P1-201ENST00000554337 1009 ntBASIC5.22□□□□□ -1.57
UPK1AO00322 AC040958.1-201ENST00000561102 201 ntBASIC5.22□□□□□ -1.57
UPK1AO00322 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.22□□□□□ -1.57
UPK1AO00322 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.22□□□□□ -1.57
UPK1AO00322 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
UPK1AO00322 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.22□□□□□ -1.57
UPK1AO00322 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
UPK1AO00322 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
UPK1AO00322 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
UPK1AO00322 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.22□□□□□ -1.57
UPK1AO00322 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.22□□□□□ -1.57
UPK1AO00322 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
UPK1AO00322 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
UPK1AO00322 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.22□□□□□ -1.57
UPK1AO00322 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
UPK1AO00322 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.57
UPK1AO00322 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
UPK1AO00322 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
UPK1AO00322 AL078621.3-201ENST00000623707 2042 ntBASIC5.21□□□□□ -1.57
UPK1AO00322 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
UPK1AO00322 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.21□□□□□ -1.58
UPK1AO00322 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms