Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6□□□□□ -1.45
TCRBV5S1A1TA0A578 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC6□□□□□ -1.45
TCRBV5S1A1TA0A578 AL450270.1-201ENST00000606160 391 ntBASIC6□□□□□ -1.45
TCRBV5S1A1TA0A578 AL355802.4-201ENST00000607635 548 ntBASIC6□□□□□ -1.45
TCRBV5S1A1TA0A578 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6□□□□□ -1.45
TCRBV5S1A1TA0A578 AL109659.3-201ENST00000624985 950 ntBASIC6□□□□□ -1.45
TCRBV5S1A1TA0A578 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6□□□□□ -1.45
TCRBV5S1A1TA0A578 5S_rRNA.28-201ENST00000638107 119 ntBASIC6□□□□□ -1.45
TCRBV5S1A1TA0A578 AC079776.5-201ENST00000641920 211 ntBASIC6□□□□□ -1.45
TCRBV5S1A1TA0A578 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
TCRBV5S1A1TA0A578 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6□□□□□ -1.45
TCRBV5S1A1TA0A578 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6□□□□□ -1.45
TCRBV5S1A1TA0A578 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
TCRBV5S1A1TA0A578 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6□□□□□ -1.45
TCRBV5S1A1TA0A578 AC027279.4-201ENST00000624371 2072 ntBASIC6□□□□□ -1.45
TCRBV5S1A1TA0A578 MARK2P4-201ENST00000503381 2380 ntBASIC6□□□□□ -1.45
TCRBV5S1A1TA0A578 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
TCRBV5S1A1TA0A578 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6□□□□□ -1.45
TCRBV5S1A1TA0A578 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TCRBV5S1A1TA0A578 MTCO1P4-201ENST00000520516 1409 ntBASIC5.99□□□□□ -1.45
TCRBV5S1A1TA0A578 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
TCRBV5S1A1TA0A578 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TCRBV5S1A1TA0A578 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TCRBV5S1A1TA0A578 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
TCRBV5S1A1TA0A578 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC5.99□□□□□ -1.45
TCRBV5S1A1TA0A578 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TCRBV5S1A1TA0A578 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
TCRBV5S1A1TA0A578 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
TCRBV5S1A1TA0A578 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
TCRBV5S1A1TA0A578 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TCRBV5S1A1TA0A578 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
TCRBV5S1A1TA0A578 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TCRBV5S1A1TA0A578 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.99□□□□□ -1.45
TCRBV5S1A1TA0A578 AC005042.1-201ENST00000393397 800 ntBASIC5.99□□□□□ -1.45
TCRBV5S1A1TA0A578 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.99□□□□□ -1.45
TCRBV5S1A1TA0A578 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.99□□□□□ -1.45
TCRBV5S1A1TA0A578 AC096921.1-201ENST00000411661 375 ntBASIC5.99□□□□□ -1.45
TCRBV5S1A1TA0A578 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.99□□□□□ -1.45
TCRBV5S1A1TA0A578 AC127526.2-201ENST00000426436 775 ntBASIC5.99□□□□□ -1.45
TCRBV5S1A1TA0A578 UBE2D3P3-201ENST00000426992 425 ntBASIC5.99□□□□□ -1.45
TCRBV5S1A1TA0A578 MRPL50P1-201ENST00000431951 384 ntBASIC5.99□□□□□ -1.45
TCRBV5S1A1TA0A578 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.99□□□□□ -1.45
TCRBV5S1A1TA0A578 HMGN1P5-201ENST00000448591 263 ntBASIC5.99□□□□□ -1.45
TCRBV5S1A1TA0A578 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.99□□□□□ -1.45
TCRBV5S1A1TA0A578 HLA-DPA3-207ENST00000454398 229 ntBASIC5.99□□□□□ -1.45
TCRBV5S1A1TA0A578 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.99□□□□□ -1.45
TCRBV5S1A1TA0A578 RPS3AP15-201ENST00000483874 781 ntBASIC5.99□□□□□ -1.45
TCRBV5S1A1TA0A578 MTCO2P9-201ENST00000503214 694 ntBASIC5.99□□□□□ -1.45
TCRBV5S1A1TA0A578 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.99□□□□□ -1.45
TCRBV5S1A1TA0A578 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.99□□□□□ -1.45
TCRBV5S1A1TA0A578 SCARNA6.1-201ENST00000516989 238 ntBASIC5.99□□□□□ -1.45
TCRBV5S1A1TA0A578 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC5.99□□□□□ -1.45
TCRBV5S1A1TA0A578 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC5.99□□□□□ -1.45
TCRBV5S1A1TA0A578 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.99□□□□□ -1.45
TCRBV5S1A1TA0A578 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.99□□□□□ -1.45
TCRBV5S1A1TA0A578 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.99□□□□□ -1.45
TCRBV5S1A1TA0A578 MIR4260-201ENST00000583107 67 ntBASIC5.99□□□□□ -1.45
TCRBV5S1A1TA0A578 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.99□□□□□ -1.45
TCRBV5S1A1TA0A578 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.99□□□□□ -1.45
TCRBV5S1A1TA0A578 KATNBL1P5-201ENST00000605015 517 ntBASIC5.99□□□□□ -1.45
TCRBV5S1A1TA0A578 AC018926.1-201ENST00000616335 435 ntBASIC5.99□□□□□ -1.45
TCRBV5S1A1TA0A578 AP000484.1-201ENST00000620067 1252 ntBASIC5.99□□□□□ -1.45
TCRBV5S1A1TA0A578 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.99□□□□□ -1.45
TCRBV5S1A1TA0A578 AC025262.3-201ENST00000623666 360 ntBASIC5.99□□□□□ -1.45
TCRBV5S1A1TA0A578 AC129778.1-202ENST00000623812 261 ntBASIC5.99□□□□□ -1.45
TCRBV5S1A1TA0A578 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.99□□□□□ -1.45
TCRBV5S1A1TA0A578 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.99□□□□□ -1.45
TCRBV5S1A1TA0A578 AL591379.1-207ENST00000635982 261 ntBASIC5.99□□□□□ -1.45
TCRBV5S1A1TA0A578 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.99□□□□□ -1.45
TCRBV5S1A1TA0A578 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TCRBV5S1A1TA0A578 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC5.99□□□□□ -1.45
TCRBV5S1A1TA0A578 MAPK10-270ENST00000641102 3538 ntBASIC5.99□□□□□ -1.45
TCRBV5S1A1TA0A578 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
TCRBV5S1A1TA0A578 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC5.99□□□□□ -1.45
TCRBV5S1A1TA0A578 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
TCRBV5S1A1TA0A578 AC110792.3-201ENST00000595906 1614 ntBASIC5.99□□□□□ -1.45
TCRBV5S1A1TA0A578 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.99□□□□□ -1.45
TCRBV5S1A1TA0A578 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
TCRBV5S1A1TA0A578 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TCRBV5S1A1TA0A578 GTF2IP4-201ENST00000453092 2054 ntBASIC5.98□□□□□ -1.45
TCRBV5S1A1TA0A578 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.98□□□□□ -1.45
TCRBV5S1A1TA0A578 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
TCRBV5S1A1TA0A578 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
TCRBV5S1A1TA0A578 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
TCRBV5S1A1TA0A578 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.98□□□□□ -1.45
TCRBV5S1A1TA0A578 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
TCRBV5S1A1TA0A578 HSPD1P7-201ENST00000447985 1686 ntBASIC5.98□□□□□ -1.45
TCRBV5S1A1TA0A578 UGT2B24P-201ENST00000514441 1597 ntBASIC5.98□□□□□ -1.45
TCRBV5S1A1TA0A578 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
TCRBV5S1A1TA0A578 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
TCRBV5S1A1TA0A578 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
TCRBV5S1A1TA0A578 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
TCRBV5S1A1TA0A578 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
TCRBV5S1A1TA0A578 AC007618.1-201ENST00000366455 732 ntBASIC5.98□□□□□ -1.45
TCRBV5S1A1TA0A578 MIR122-201ENST00000385044 85 ntBASIC5.98□□□□□ -1.45
TCRBV5S1A1TA0A578 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
TCRBV5S1A1TA0A578 LYPLA1P3-201ENST00000402650 695 ntBASIC5.98□□□□□ -1.45
TCRBV5S1A1TA0A578 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
TCRBV5S1A1TA0A578 RN7SKP240-201ENST00000410583 375 ntBASIC5.98□□□□□ -1.45
TCRBV5S1A1TA0A578 OR13Z1P-201ENST00000416141 834 ntBASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms