Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 RN7SKP269-201ENST00000365545 319 ntBASIC6.14□□□□□ -1.43
SNX9Q9Y5X1 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
SNX9Q9Y5X1 AC087752.1-201ENST00000391360 558 ntBASIC6.14□□□□□ -1.43
SNX9Q9Y5X1 PEX12P1-201ENST00000400284 1048 ntBASIC6.14□□□□□ -1.43
SNX9Q9Y5X1 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.14□□□□□ -1.43
SNX9Q9Y5X1 RN7SKP286-201ENST00000410894 299 ntBASIC6.14□□□□□ -1.43
SNX9Q9Y5X1 RMRPP5-201ENST00000411156 267 ntBASIC6.14□□□□□ -1.43
SNX9Q9Y5X1 SDHDP6-201ENST00000414693 480 ntBASIC6.14□□□□□ -1.43
SNX9Q9Y5X1 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.14□□□□□ -1.43
SNX9Q9Y5X1 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC6.14□□□□□ -1.43
SNX9Q9Y5X1 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC6.14□□□□□ -1.43
SNX9Q9Y5X1 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.14□□□□□ -1.43
SNX9Q9Y5X1 CRIP1P1-201ENST00000427567 185 ntBASIC6.14□□□□□ -1.43
SNX9Q9Y5X1 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.14□□□□□ -1.43
SNX9Q9Y5X1 AL391987.1-201ENST00000441025 200 ntBASIC6.14□□□□□ -1.43
SNX9Q9Y5X1 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC6.14□□□□□ -1.43
SNX9Q9Y5X1 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.14□□□□□ -1.43
SNX9Q9Y5X1 AC007386.1-201ENST00000455212 582 ntBASIC6.14□□□□□ -1.43
SNX9Q9Y5X1 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
SNX9Q9Y5X1 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC6.14□□□□□ -1.43
SNX9Q9Y5X1 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC6.14□□□□□ -1.43
SNX9Q9Y5X1 MRPS16P1-201ENST00000523462 412 ntBASIC6.14□□□□□ -1.43
SNX9Q9Y5X1 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC6.14□□□□□ -1.43
SNX9Q9Y5X1 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SNX9Q9Y5X1 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC6.14□□□□□ -1.43
SNX9Q9Y5X1 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.14□□□□□ -1.43
SNX9Q9Y5X1 AC012146.2-201ENST00000576545 416 ntBASIC6.14□□□□□ -1.43
SNX9Q9Y5X1 MIR4433B-201ENST00000581329 102 ntBASIC6.14□□□□□ -1.43
SNX9Q9Y5X1 AC063977.5-201ENST00000601044 974 ntBASIC6.14□□□□□ -1.43
SNX9Q9Y5X1 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.14□□□□□ -1.43
SNX9Q9Y5X1 AL390318.1-201ENST00000624564 687 ntBASIC6.14□□□□□ -1.43
SNX9Q9Y5X1 RFC1-217ENST00000639695 867 ntTSL 5 BASIC6.14□□□□□ -1.43
SNX9Q9Y5X1 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.14□□□□□ -1.43
SNX9Q9Y5X1 AC025470.1-201ENST00000510053 2032 ntBASIC6.14□□□□□ -1.43
SNX9Q9Y5X1 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SNX9Q9Y5X1 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.14□□□□□ -1.43
SNX9Q9Y5X1 AC125336.1-201ENST00000508893 2827 ntBASIC6.14□□□□□ -1.43
SNX9Q9Y5X1 AP001284.1-201ENST00000528393 2118 ntBASIC6.14□□□□□ -1.43
SNX9Q9Y5X1 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC6.14□□□□□ -1.43
SNX9Q9Y5X1 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
SNX9Q9Y5X1 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SNX9Q9Y5X1 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.14□□□□□ -1.43
SNX9Q9Y5X1 SRRM1P3-201ENST00000426911 2678 ntBASIC6.13□□□□□ -1.43
SNX9Q9Y5X1 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.13□□□□□ -1.43
SNX9Q9Y5X1 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
SNX9Q9Y5X1 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.13□□□□□ -1.43
SNX9Q9Y5X1 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
SNX9Q9Y5X1 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
SNX9Q9Y5X1 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SNX9Q9Y5X1 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.13□□□□□ -1.43
SNX9Q9Y5X1 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC6.13□□□□□ -1.43
SNX9Q9Y5X1 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SNX9Q9Y5X1 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC6.13□□□□□ -1.43
SNX9Q9Y5X1 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SNX9Q9Y5X1 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC6.13□□□□□ -1.43
SNX9Q9Y5X1 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC6.13□□□□□ -1.43
SNX9Q9Y5X1 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC6.13□□□□□ -1.43
SNX9Q9Y5X1 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.13□□□□□ -1.43
SNX9Q9Y5X1 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC6.13□□□□□ -1.43
SNX9Q9Y5X1 AC002504.1-201ENST00000438281 691 ntBASIC6.13□□□□□ -1.43
SNX9Q9Y5X1 EEF1B2P6-201ENST00000445713 673 ntBASIC6.13□□□□□ -1.43
SNX9Q9Y5X1 RSU1P1-201ENST00000453416 441 ntBASIC6.13□□□□□ -1.43
SNX9Q9Y5X1 RPS23P2-201ENST00000463671 415 ntBASIC6.13□□□□□ -1.43
SNX9Q9Y5X1 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.13□□□□□ -1.43
SNX9Q9Y5X1 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SNX9Q9Y5X1 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SNX9Q9Y5X1 AC073610.1-201ENST00000489971 396 ntBASIC6.13□□□□□ -1.43
SNX9Q9Y5X1 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6.13□□□□□ -1.43
SNX9Q9Y5X1 DUTP1-201ENST00000493631 470 ntBASIC6.13□□□□□ -1.43
SNX9Q9Y5X1 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC6.13□□□□□ -1.43
SNX9Q9Y5X1 SNRPGP1-201ENST00000553864 222 ntBASIC6.13□□□□□ -1.43
SNX9Q9Y5X1 IGBP1P1-201ENST00000554337 1009 ntBASIC6.13□□□□□ -1.43
SNX9Q9Y5X1 NPM1P5-201ENST00000557228 838 ntBASIC6.13□□□□□ -1.43
SNX9Q9Y5X1 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.13□□□□□ -1.43
SNX9Q9Y5X1 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC6.13□□□□□ -1.43
SNX9Q9Y5X1 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.13□□□□□ -1.43
SNX9Q9Y5X1 AL513327.3-201ENST00000602618 469 ntBASIC6.13□□□□□ -1.43
SNX9Q9Y5X1 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC6.13□□□□□ -1.43
SNX9Q9Y5X1 AL133481.2-203ENST00000607558 139 ntBASIC6.13□□□□□ -1.43
SNX9Q9Y5X1 RNA5SP440-201ENST00000612665 119 ntBASIC6.13□□□□□ -1.43
SNX9Q9Y5X1 AC090607.5-201ENST00000615692 224 ntBASIC6.13□□□□□ -1.43
SNX9Q9Y5X1 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC6.13□□□□□ -1.43
SNX9Q9Y5X1 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
SNX9Q9Y5X1 AC233968.1-201ENST00000611212 1300 ntBASIC6.13□□□□□ -1.43
SNX9Q9Y5X1 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.13□□□□□ -1.43
SNX9Q9Y5X1 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SNX9Q9Y5X1 AP000473.2-201ENST00000602659 1537 ntBASIC6.13□□□□□ -1.43
SNX9Q9Y5X1 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
SNX9Q9Y5X1 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SNX9Q9Y5X1 AL359955.1-201ENST00000455242 3275 ntBASIC6.13□□□□□ -1.43
SNX9Q9Y5X1 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.13□□□□□ -1.43
SNX9Q9Y5X1 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.13□□□□□ -1.43
SNX9Q9Y5X1 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
SNX9Q9Y5X1 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
SNX9Q9Y5X1 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SNX9Q9Y5X1 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
SNX9Q9Y5X1 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.13□□□□□ -1.43
SNX9Q9Y5X1 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
SNX9Q9Y5X1 AC011933.2-201ENST00000578539 2790 ntBASIC6.12□□□□□ -1.43
SNX9Q9Y5X1 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms