Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 RN7SL689P-201ENST00000577215 297 ntBASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 AC010761.6-201ENST00000587898 197 ntTSL 3 BASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 HNRNPA1P67-201ENST00000604027 926 ntBASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 AC007363.1-201ENST00000604736 620 ntBASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 pRNA.12-201ENST00000614353 90 ntBASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 pRNA.3-201ENST00000615048 90 ntBASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 SLC20A1P2-201ENST00000618036 966 ntBASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 AL359745.1-201ENST00000626943 760 ntTSL 5 BASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 AC093591.3-201ENST00000634516 308 ntBASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 AC010653.3-201ENST00000635332 232 ntBASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 RIOK2-201ENST00000283109 3922 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 AC074198.1-201ENST00000506546 1397 ntBASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 AC116535.1-201ENST00000499765 2335 ntTSL 2 BASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 USP37-204ENST00000418019 3353 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 AL136298.2-201ENST00000556497 1570 ntBASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 APP-209ENST00000440126 2846 ntTSL 2 BASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 TM4SF1-201ENST00000305366 1771 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 CRNKL1-207ENST00000536226 4009 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 CYFIP2-210ENST00000522463 3477 ntTSL 2 BASIC7.53□□□□□ -1.2
PCDHB11Q9Y5F2 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
PCDHB11Q9Y5F2 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC7.52□□□□□ -1.2
PCDHB11Q9Y5F2 MTFR2-205ENST00000451457 1524 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.2
PCDHB11Q9Y5F2 AC015689.2-201ENST00000528172 1738 ntBASIC7.52□□□□□ -1.2
PCDHB11Q9Y5F2 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
PCDHB11Q9Y5F2 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC7.52□□□□□ -1.2
PCDHB11Q9Y5F2 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
PCDHB11Q9Y5F2 WDR64-204ENST00000437684 2310 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
PCDHB11Q9Y5F2 SOSTDC1-202ENST00000396652 2411 ntTSL 2 BASIC7.52□□□□□ -1.2
PCDHB11Q9Y5F2 EPB41L2-228ENST00000531410 2926 ntTSL 5 BASIC7.52□□□□□ -1.21
PCDHB11Q9Y5F2 CCDC66-203ENST00000394672 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
PCDHB11Q9Y5F2 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
PCDHB11Q9Y5F2 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC7.52□□□□□ -1.21
PCDHB11Q9Y5F2 AL022163.1-201ENST00000430261 1569 ntBASIC7.52□□□□□ -1.21
PCDHB11Q9Y5F2 EEF1A1P14-201ENST00000421195 1376 ntBASIC7.52□□□□□ -1.21
PCDHB11Q9Y5F2 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
PCDHB11Q9Y5F2 C9orf92-202ENST00000380685 379 ntAPPRIS ALT2 TSL 2 BASIC7.52□□□□□ -1.21
PCDHB11Q9Y5F2 GAGE12E-201ENST00000381698 520 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
PCDHB11Q9Y5F2 RN7SKP117-201ENST00000410175 264 ntBASIC7.52□□□□□ -1.21
PCDHB11Q9Y5F2 HMGB1P11-201ENST00000413899 637 ntBASIC7.52□□□□□ -1.21
PCDHB11Q9Y5F2 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC7.52□□□□□ -1.21
PCDHB11Q9Y5F2 AC064875.1-203ENST00000422996 582 ntTSL 4 BASIC7.52□□□□□ -1.21
PCDHB11Q9Y5F2 AL157884.1-201ENST00000424561 454 ntBASIC7.52□□□□□ -1.21
PCDHB11Q9Y5F2 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC7.52□□□□□ -1.21
PCDHB11Q9Y5F2 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
PCDHB11Q9Y5F2 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC7.52□□□□□ -1.21
PCDHB11Q9Y5F2 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC7.52□□□□□ -1.21
PCDHB11Q9Y5F2 AC123904.1-201ENST00000441072 368 ntBASIC7.52□□□□□ -1.21
PCDHB11Q9Y5F2 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC7.52□□□□□ -1.21
PCDHB11Q9Y5F2 FO393419.1-201ENST00000443746 355 ntBASIC7.52□□□□□ -1.21
PCDHB11Q9Y5F2 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC7.52□□□□□ -1.21
PCDHB11Q9Y5F2 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC7.52□□□□□ -1.21
PCDHB11Q9Y5F2 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC7.52□□□□□ -1.21
PCDHB11Q9Y5F2 RN7SL145P-201ENST00000469955 296 ntBASIC7.52□□□□□ -1.21
PCDHB11Q9Y5F2 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC7.52□□□□□ -1.21
PCDHB11Q9Y5F2 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC7.52□□□□□ -1.21
PCDHB11Q9Y5F2 Y_RNA.704-201ENST00000516851 102 ntBASIC7.52□□□□□ -1.21
PCDHB11Q9Y5F2 RGS5-218ENST00000526176 574 ntTSL 4 BASIC7.52□□□□□ -1.21
PCDHB11Q9Y5F2 AP001189.2-201ENST00000527320 189 ntBASIC7.52□□□□□ -1.21
PCDHB11Q9Y5F2 AP002812.4-201ENST00000532139 286 ntBASIC7.52□□□□□ -1.21
PCDHB11Q9Y5F2 AC084361.1-201ENST00000537730 607 ntTSL 3 BASIC7.52□□□□□ -1.21
PCDHB11Q9Y5F2 ARL2BPP2-201ENST00000550907 489 ntBASIC7.52□□□□□ -1.21
PCDHB11Q9Y5F2 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC7.52□□□□□ -1.21
PCDHB11Q9Y5F2 WDR61-205ENST00000558459 884 ntTSL 3 BASIC7.52□□□□□ -1.21
PCDHB11Q9Y5F2 MIR3671-201ENST00000580455 88 ntBASIC7.52□□□□□ -1.21
PCDHB11Q9Y5F2 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC7.52□□□□□ -1.21
PCDHB11Q9Y5F2 MIR4795-201ENST00000584182 89 ntBASIC7.52□□□□□ -1.21
PCDHB11Q9Y5F2 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC7.52□□□□□ -1.21
PCDHB11Q9Y5F2 AL021918.1-201ENST00000603933 236 ntBASIC7.52□□□□□ -1.21
PCDHB11Q9Y5F2 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
PCDHB11Q9Y5F2 AL109954.1-201ENST00000619495 557 ntTSL 4 BASIC7.52□□□□□ -1.21
PCDHB11Q9Y5F2 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC7.52□□□□□ -1.21
PCDHB11Q9Y5F2 AC005609.2-201ENST00000623320 592 ntBASIC7.52□□□□□ -1.21
PCDHB11Q9Y5F2 AC068880.5-201ENST00000624331 290 ntBASIC7.52□□□□□ -1.21
PCDHB11Q9Y5F2 AC110769.3-201ENST00000624567 1173 ntBASIC7.52□□□□□ -1.21
PCDHB11Q9Y5F2 AC006065.6-201ENST00000625201 545 ntBASIC7.52□□□□□ -1.21
PCDHB11Q9Y5F2 TEX41-279ENST00000629149 609 ntTSL 5 BASIC7.52□□□□□ -1.21
PCDHB11Q9Y5F2 MIR3662-201ENST00000637030 95 ntBASIC7.52□□□□□ -1.21
PCDHB11Q9Y5F2 MKKS-204ENST00000639674 192 ntBASIC7.52□□□□□ -1.21
PCDHB11Q9Y5F2 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
PCDHB11Q9Y5F2 RNF219-201ENST00000282003 3529 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
PCDHB11Q9Y5F2 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
PCDHB11Q9Y5F2 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC7.52□□□□□ -1.21
PCDHB11Q9Y5F2 LINC01091-204ENST00000515769 2204 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
PCDHB11Q9Y5F2 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
PCDHB11Q9Y5F2 HEPACAM2-202ENST00000394468 2148 ntAPPRIS ALT2 TSL 2 BASIC7.52□□□□□ -1.21
PCDHB11Q9Y5F2 AC018992.1-201ENST00000523778 2149 ntBASIC7.52□□□□□ -1.21
PCDHB11Q9Y5F2 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
PCDHB11Q9Y5F2 FBXL4-202ENST00000369244 8035 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
PCDHB11Q9Y5F2 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
PCDHB11Q9Y5F2 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.21
PCDHB11Q9Y5F2 OPALIN-206ENST00000611913 3115 ntTSL 5 BASIC7.52□□□□□ -1.21
PCDHB11Q9Y5F2 AC107982.1-201ENST00000507171 1300 ntBASIC7.52□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms