Protein–RNA interactions for Protein: Q9Y5E5

PCDHB4, Protocadherin beta-4, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4Q9Y5E5 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC6.75□□□□□ -1.33
PCDHB4Q9Y5E5 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
PCDHB4Q9Y5E5 ZNF402P-201ENST00000404435 3100 ntBASIC6.75□□□□□ -1.33
PCDHB4Q9Y5E5 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
PCDHB4Q9Y5E5 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC6.75□□□□□ -1.33
PCDHB4Q9Y5E5 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
PCDHB4Q9Y5E5 AC110373.1-201ENST00000505994 3505 ntBASIC6.75□□□□□ -1.33
PCDHB4Q9Y5E5 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PCDHB4Q9Y5E5 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
PCDHB4Q9Y5E5 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PCDHB4Q9Y5E5 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
PCDHB4Q9Y5E5 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 RNFT1P3-201ENST00000340898 1052 ntBASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 MIR191-201ENST00000384873 92 ntBASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 AL603865.2-201ENST00000401679 213 ntBASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 RNU4-22P-201ENST00000411058 166 ntBASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 RN7SKP161-201ENST00000411110 305 ntBASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 AL158825.1-201ENST00000414735 521 ntBASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 Z82198.3-201ENST00000421145 199 ntBASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 LINC00328-2P-201ENST00000436585 219 ntBASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 CXCR2P1-202ENST00000443392 1074 ntBASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 KF459542.1-201ENST00000450908 553 ntBASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 ART2BP-201ENST00000453501 499 ntBASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 RAP1BP2-201ENST00000478270 544 ntBASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 RN7SL612P-201ENST00000497704 295 ntBASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 MTND4P2-201ENST00000507767 1203 ntBASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 AL117351.2-201ENST00000513571 157 ntBASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 AC093816.1-201ENST00000515076 913 ntBASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 RNA5SP206-201ENST00000516703 121 ntBASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 AP005136.1-201ENST00000579765 429 ntBASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 AC124856.1-201ENST00000600819 896 ntBASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 AL049840.6-201ENST00000604583 345 ntBASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 AC015819.1-201ENST00000613588 663 ntBASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 VN1R9P-201ENST00000614184 867 ntBASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 HTR1DP1-201ENST00000616500 888 ntBASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 AC090897.3-201ENST00000636973 1157 ntBASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 CASC19-246ENST00000641625 1606 ntBASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 OR10AB1P-202ENST00000641219 1686 ntBASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 AC130360.2-201ENST00000533477 1556 ntBASIC6.74□□□□□ -1.33
PCDHB4Q9Y5E5 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHB4Q9Y5E5 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
PCDHB4Q9Y5E5 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.73□□□□□ -1.33
PCDHB4Q9Y5E5 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.73□□□□□ -1.33
PCDHB4Q9Y5E5 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHB4Q9Y5E5 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHB4Q9Y5E5 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHB4Q9Y5E5 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHB4Q9Y5E5 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
PCDHB4Q9Y5E5 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHB4Q9Y5E5 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHB4Q9Y5E5 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
PCDHB4Q9Y5E5 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
PCDHB4Q9Y5E5 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
PCDHB4Q9Y5E5 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
PCDHB4Q9Y5E5 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms