Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.41□□□□□ -1.54
ATG4BQ9Y4P1 AP001357.1-201ENST00000586304 1053 ntBASIC5.41□□□□□ -1.54
ATG4BQ9Y4P1 AC015802.2-201ENST00000589690 189 ntBASIC5.41□□□□□ -1.54
ATG4BQ9Y4P1 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.41□□□□□ -1.54
ATG4BQ9Y4P1 AP005431.1-201ENST00000618479 319 ntBASIC5.41□□□□□ -1.54
ATG4BQ9Y4P1 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
ATG4BQ9Y4P1 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
ATG4BQ9Y4P1 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.41□□□□□ -1.54
ATG4BQ9Y4P1 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
ATG4BQ9Y4P1 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
ATG4BQ9Y4P1 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
ATG4BQ9Y4P1 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
ATG4BQ9Y4P1 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
ATG4BQ9Y4P1 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
ATG4BQ9Y4P1 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.41□□□□□ -1.54
ATG4BQ9Y4P1 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
ATG4BQ9Y4P1 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.41□□□□□ -1.54
ATG4BQ9Y4P1 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
ATG4BQ9Y4P1 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.4□□□□□ -1.54
ATG4BQ9Y4P1 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.4□□□□□ -1.54
ATG4BQ9Y4P1 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
ATG4BQ9Y4P1 Z83820.1-201ENST00000456978 1499 ntBASIC5.4□□□□□ -1.54
ATG4BQ9Y4P1 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
ATG4BQ9Y4P1 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
ATG4BQ9Y4P1 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.4□□□□□ -1.54
ATG4BQ9Y4P1 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.4□□□□□ -1.54
ATG4BQ9Y4P1 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
ATG4BQ9Y4P1 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
ATG4BQ9Y4P1 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.4□□□□□ -1.54
ATG4BQ9Y4P1 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
ATG4BQ9Y4P1 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.4□□□□□ -1.54
ATG4BQ9Y4P1 RNU1-136P-201ENST00000384181 164 ntBASIC5.4□□□□□ -1.54
ATG4BQ9Y4P1 AL031985.1-201ENST00000392713 418 ntBASIC5.4□□□□□ -1.54
ATG4BQ9Y4P1 RPS3AP2-201ENST00000407190 754 ntBASIC5.4□□□□□ -1.54
ATG4BQ9Y4P1 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.4□□□□□ -1.54
ATG4BQ9Y4P1 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.4□□□□□ -1.54
ATG4BQ9Y4P1 EEF1B2P8-201ENST00000414101 671 ntBASIC5.4□□□□□ -1.54
ATG4BQ9Y4P1 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.4□□□□□ -1.54
ATG4BQ9Y4P1 RNGTTP1-201ENST00000420965 728 ntBASIC5.4□□□□□ -1.54
ATG4BQ9Y4P1 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.4□□□□□ -1.54
ATG4BQ9Y4P1 AC127526.2-201ENST00000426436 775 ntBASIC5.4□□□□□ -1.54
ATG4BQ9Y4P1 AC104843.2-201ENST00000427666 297 ntBASIC5.4□□□□□ -1.54
ATG4BQ9Y4P1 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
ATG4BQ9Y4P1 HMGB3P24-201ENST00000433260 622 ntBASIC5.4□□□□□ -1.54
ATG4BQ9Y4P1 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.4□□□□□ -1.54
ATG4BQ9Y4P1 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.4□□□□□ -1.54
ATG4BQ9Y4P1 OR7L1P-201ENST00000456181 380 ntBASIC5.4□□□□□ -1.54
ATG4BQ9Y4P1 UBFD1P1-201ENST00000473259 814 ntBASIC5.4□□□□□ -1.54
ATG4BQ9Y4P1 AC016687.1-201ENST00000482574 353 ntBASIC5.4□□□□□ -1.54
ATG4BQ9Y4P1 RPL7P51-201ENST00000490532 749 ntBASIC5.4□□□□□ -1.54
ATG4BQ9Y4P1 TRIM36-IT1-201ENST00000503723 881 ntBASIC5.4□□□□□ -1.54
ATG4BQ9Y4P1 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.4□□□□□ -1.54
ATG4BQ9Y4P1 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
ATG4BQ9Y4P1 SNORA70.20-201ENST00000516848 126 ntBASIC5.4□□□□□ -1.54
ATG4BQ9Y4P1 IGKV3D-34-201ENST00000522638 302 ntBASIC5.4□□□□□ -1.54
ATG4BQ9Y4P1 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.4□□□□□ -1.54
ATG4BQ9Y4P1 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.4□□□□□ -1.54
ATG4BQ9Y4P1 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.4□□□□□ -1.54
ATG4BQ9Y4P1 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.4□□□□□ -1.54
ATG4BQ9Y4P1 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.4□□□□□ -1.54
ATG4BQ9Y4P1 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.4□□□□□ -1.54
ATG4BQ9Y4P1 AC063977.5-201ENST00000601044 974 ntBASIC5.4□□□□□ -1.54
ATG4BQ9Y4P1 AC008691.1-209ENST00000642094 814 ntBASIC5.4□□□□□ -1.54
ATG4BQ9Y4P1 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.4□□□□□ -1.55
ATG4BQ9Y4P1 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
ATG4BQ9Y4P1 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
ATG4BQ9Y4P1 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
ATG4BQ9Y4P1 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.4□□□□□ -1.55
ATG4BQ9Y4P1 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
ATG4BQ9Y4P1 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.4□□□□□ -1.55
ATG4BQ9Y4P1 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
ATG4BQ9Y4P1 AC015689.2-201ENST00000528172 1738 ntBASIC5.4□□□□□ -1.55
ATG4BQ9Y4P1 AC092111.2-201ENST00000611627 1414 ntBASIC5.4□□□□□ -1.55
ATG4BQ9Y4P1 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
ATG4BQ9Y4P1 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
ATG4BQ9Y4P1 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
ATG4BQ9Y4P1 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
ATG4BQ9Y4P1 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.39□□□□□ -1.55
ATG4BQ9Y4P1 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.39□□□□□ -1.55
ATG4BQ9Y4P1 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.39□□□□□ -1.55
ATG4BQ9Y4P1 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
ATG4BQ9Y4P1 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
ATG4BQ9Y4P1 CDY17P-201ENST00000414121 1282 ntBASIC5.39□□□□□ -1.55
ATG4BQ9Y4P1 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.39□□□□□ -1.55
ATG4BQ9Y4P1 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.39□□□□□ -1.55
ATG4BQ9Y4P1 NAP1L4P2-201ENST00000425958 899 ntBASIC5.39□□□□□ -1.55
ATG4BQ9Y4P1 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.39□□□□□ -1.55
ATG4BQ9Y4P1 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.39□□□□□ -1.55
ATG4BQ9Y4P1 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.39□□□□□ -1.55
ATG4BQ9Y4P1 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.39□□□□□ -1.55
ATG4BQ9Y4P1 RPL31P15-201ENST00000449770 338 ntBASIC5.39□□□□□ -1.55
ATG4BQ9Y4P1 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.39□□□□□ -1.55
ATG4BQ9Y4P1 AL445665.1-202ENST00000452436 324 ntBASIC5.39□□□□□ -1.55
ATG4BQ9Y4P1 RPS23P6-201ENST00000466136 431 ntBASIC5.39□□□□□ -1.55
ATG4BQ9Y4P1 AC022215.1-201ENST00000481770 362 ntBASIC5.39□□□□□ -1.55
ATG4BQ9Y4P1 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
ATG4BQ9Y4P1 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
ATG4BQ9Y4P1 MTATP6P1-201ENST00000514057 681 ntBASIC5.39□□□□□ -1.55
ATG4BQ9Y4P1 IGLVIV-64-201ENST00000518581 301 ntBASIC5.39□□□□□ -1.55
ATG4BQ9Y4P1 AC139697.1-201ENST00000548429 745 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms