Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AC004839.1-201ENST00000610269 501 ntBASIC4.75□□□□□ -1.65
KCNIP3Q9Y2W7 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC4.75□□□□□ -1.65
KCNIP3Q9Y2W7 RFPL4AP6-201ENST00000616792 846 ntBASIC4.75□□□□□ -1.65
KCNIP3Q9Y2W7 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
KCNIP3Q9Y2W7 CLUHP10-201ENST00000631979 980 ntBASIC4.75□□□□□ -1.65
KCNIP3Q9Y2W7 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
KCNIP3Q9Y2W7 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
KCNIP3Q9Y2W7 AC079097.1-201ENST00000512187 1399 ntBASIC4.75□□□□□ -1.65
KCNIP3Q9Y2W7 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC4.75□□□□□ -1.65
KCNIP3Q9Y2W7 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC4.75□□□□□ -1.65
KCNIP3Q9Y2W7 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
KCNIP3Q9Y2W7 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
KCNIP3Q9Y2W7 AC217777.1-201ENST00000570034 1471 ntBASIC4.75□□□□□ -1.65
KCNIP3Q9Y2W7 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
KCNIP3Q9Y2W7 ZNF652P1-201ENST00000442420 1309 ntBASIC4.74□□□□□ -1.65
KCNIP3Q9Y2W7 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
KCNIP3Q9Y2W7 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
KCNIP3Q9Y2W7 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
KCNIP3Q9Y2W7 AC083843.3-201ENST00000623679 2186 ntBASIC4.74□□□□□ -1.65
KCNIP3Q9Y2W7 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
KCNIP3Q9Y2W7 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
KCNIP3Q9Y2W7 RBPJP2-201ENST00000618187 1444 ntBASIC4.74□□□□□ -1.65
KCNIP3Q9Y2W7 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.74□□□□□ -1.65
KCNIP3Q9Y2W7 THAP12P5-201ENST00000405864 2275 ntBASIC4.74□□□□□ -1.65
KCNIP3Q9Y2W7 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
KCNIP3Q9Y2W7 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
KCNIP3Q9Y2W7 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.74□□□□□ -1.65
KCNIP3Q9Y2W7 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
KCNIP3Q9Y2W7 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC4.74□□□□□ -1.65
KCNIP3Q9Y2W7 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
KCNIP3Q9Y2W7 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
KCNIP3Q9Y2W7 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC4.74□□□□□ -1.65
KCNIP3Q9Y2W7 RPA3-204ENST00000406109 434 ntTSL 3 BASIC4.74□□□□□ -1.65
KCNIP3Q9Y2W7 MIR1266-201ENST00000408125 84 ntBASIC4.74□□□□□ -1.65
KCNIP3Q9Y2W7 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC4.74□□□□□ -1.65
KCNIP3Q9Y2W7 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC4.74□□□□□ -1.65
KCNIP3Q9Y2W7 AC234771.4-201ENST00000441416 730 ntBASIC4.74□□□□□ -1.65
KCNIP3Q9Y2W7 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC4.74□□□□□ -1.65
KCNIP3Q9Y2W7 TREML3P-201ENST00000457327 501 ntBASIC4.74□□□□□ -1.65
KCNIP3Q9Y2W7 AC019084.1-201ENST00000457337 432 ntBASIC4.74□□□□□ -1.65
KCNIP3Q9Y2W7 TPT1P1-201ENST00000458495 518 ntBASIC4.74□□□□□ -1.65
KCNIP3Q9Y2W7 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.74□□□□□ -1.65
KCNIP3Q9Y2W7 AP003385.3-201ENST00000472498 287 ntBASIC4.74□□□□□ -1.65
KCNIP3Q9Y2W7 AL049874.2-201ENST00000492636 288 ntBASIC4.74□□□□□ -1.65
KCNIP3Q9Y2W7 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC4.74□□□□□ -1.65
KCNIP3Q9Y2W7 CR383658.1-201ENST00000514609 734 ntBASIC4.74□□□□□ -1.65
KCNIP3Q9Y2W7 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC4.74□□□□□ -1.65
KCNIP3Q9Y2W7 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC4.74□□□□□ -1.65
KCNIP3Q9Y2W7 SNORA74.1-201ENST00000516320 180 ntBASIC4.74□□□□□ -1.65
KCNIP3Q9Y2W7 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.74□□□□□ -1.65
KCNIP3Q9Y2W7 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.74□□□□□ -1.65
KCNIP3Q9Y2W7 AC090022.1-201ENST00000546569 311 ntBASIC4.74□□□□□ -1.65
KCNIP3Q9Y2W7 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC4.74□□□□□ -1.65
KCNIP3Q9Y2W7 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC4.74□□□□□ -1.65
KCNIP3Q9Y2W7 AL589765.6-201ENST00000601909 549 ntBASIC4.74□□□□□ -1.65
KCNIP3Q9Y2W7 AC067838.1-201ENST00000606064 577 ntBASIC4.74□□□□□ -1.65
KCNIP3Q9Y2W7 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
KCNIP3Q9Y2W7 NF1P10-201ENST00000613227 742 ntBASIC4.74□□□□□ -1.65
KCNIP3Q9Y2W7 MIR6726-201ENST00000613751 61 ntBASIC4.74□□□□□ -1.65
KCNIP3Q9Y2W7 AL122023.1-201ENST00000622847 530 ntBASIC4.74□□□□□ -1.65
KCNIP3Q9Y2W7 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.74□□□□□ -1.65
KCNIP3Q9Y2W7 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC4.74□□□□□ -1.65
KCNIP3Q9Y2W7 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
KCNIP3Q9Y2W7 MFSD8-219ENST00000641228 2559 ntBASIC4.74□□□□□ -1.65
KCNIP3Q9Y2W7 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC4.74□□□□□ -1.65
KCNIP3Q9Y2W7 ZCWPW2-201ENST00000383768 1716 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
KCNIP3Q9Y2W7 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
KCNIP3Q9Y2W7 AP000542.2-201ENST00000623199 6179 ntBASIC4.74□□□□□ -1.65
KCNIP3Q9Y2W7 AC104964.3-201ENST00000606115 2860 ntBASIC4.74□□□□□ -1.65
KCNIP3Q9Y2W7 SMG1P7-201ENST00000565246 2704 ntBASIC4.74□□□□□ -1.65
KCNIP3Q9Y2W7 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.73□□□□□ -1.65
KCNIP3Q9Y2W7 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
KCNIP3Q9Y2W7 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC4.73□□□□□ -1.65
KCNIP3Q9Y2W7 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
KCNIP3Q9Y2W7 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.73□□□□□ -1.65
KCNIP3Q9Y2W7 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.73□□□□□ -1.65
KCNIP3Q9Y2W7 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.73□□□□□ -1.65
KCNIP3Q9Y2W7 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
KCNIP3Q9Y2W7 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
KCNIP3Q9Y2W7 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
KCNIP3Q9Y2W7 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
KCNIP3Q9Y2W7 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
KCNIP3Q9Y2W7 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.73□□□□□ -1.65
KCNIP3Q9Y2W7 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
KCNIP3Q9Y2W7 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
KCNIP3Q9Y2W7 Y_RNA.209-201ENST00000364156 111 ntBASIC4.73□□□□□ -1.65
KCNIP3Q9Y2W7 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
KCNIP3Q9Y2W7 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
KCNIP3Q9Y2W7 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC4.73□□□□□ -1.65
KCNIP3Q9Y2W7 CCL7-202ENST00000394627 696 ntTSL 3 BASIC4.73□□□□□ -1.65
KCNIP3Q9Y2W7 VDAC2P1-201ENST00000399358 958 ntBASIC4.73□□□□□ -1.65
KCNIP3Q9Y2W7 PRELID1P1-201ENST00000403549 660 ntBASIC4.73□□□□□ -1.65
KCNIP3Q9Y2W7 RN7SKP247-201ENST00000411094 308 ntBASIC4.73□□□□□ -1.65
KCNIP3Q9Y2W7 RNU2-18P-201ENST00000411224 162 ntBASIC4.73□□□□□ -1.65
KCNIP3Q9Y2W7 CTSL3P-202ENST00000412179 788 ntBASIC4.73□□□□□ -1.65
KCNIP3Q9Y2W7 OR52N3P-201ENST00000413417 934 ntBASIC4.73□□□□□ -1.65
KCNIP3Q9Y2W7 PTP4A1P1-201ENST00000420539 515 ntBASIC4.73□□□□□ -1.65
KCNIP3Q9Y2W7 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4.73□□□□□ -1.65
KCNIP3Q9Y2W7 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC4.73□□□□□ -1.65
KCNIP3Q9Y2W7 NDUFB4P8-201ENST00000435351 367 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms