Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.18□□□□□ -1.58
TRAPPC4Q9Y296 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TRAPPC4Q9Y296 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TRAPPC4Q9Y296 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TRAPPC4Q9Y296 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TRAPPC4Q9Y296 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.18□□□□□ -1.58
TRAPPC4Q9Y296 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TRAPPC4Q9Y296 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TRAPPC4Q9Y296 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TRAPPC4Q9Y296 RNU1-136P-201ENST00000384181 164 ntBASIC5.18□□□□□ -1.58
TRAPPC4Q9Y296 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TRAPPC4Q9Y296 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.18□□□□□ -1.58
TRAPPC4Q9Y296 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.18□□□□□ -1.58
TRAPPC4Q9Y296 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.18□□□□□ -1.58
TRAPPC4Q9Y296 OR10T1P-201ENST00000424327 947 ntBASIC5.18□□□□□ -1.58
TRAPPC4Q9Y296 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.18□□□□□ -1.58
TRAPPC4Q9Y296 AL022331.1-201ENST00000429025 477 ntBASIC5.18□□□□□ -1.58
TRAPPC4Q9Y296 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.18□□□□□ -1.58
TRAPPC4Q9Y296 AL359265.1-201ENST00000440296 795 ntBASIC5.18□□□□□ -1.58
TRAPPC4Q9Y296 AC093166.4-201ENST00000457867 318 ntBASIC5.18□□□□□ -1.58
TRAPPC4Q9Y296 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.18□□□□□ -1.58
TRAPPC4Q9Y296 RPS4XP12-201ENST00000461747 709 ntBASIC5.18□□□□□ -1.58
TRAPPC4Q9Y296 RPS23P2-201ENST00000463671 415 ntBASIC5.18□□□□□ -1.58
TRAPPC4Q9Y296 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.18□□□□□ -1.58
TRAPPC4Q9Y296 NDUFA5P5-201ENST00000468361 342 ntBASIC5.18□□□□□ -1.58
TRAPPC4Q9Y296 AC094085.1-201ENST00000468914 584 ntBASIC5.18□□□□□ -1.58
TRAPPC4Q9Y296 NENFP3-201ENST00000503735 313 ntBASIC5.18□□□□□ -1.58
TRAPPC4Q9Y296 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.18□□□□□ -1.58
TRAPPC4Q9Y296 TMEM97P2-201ENST00000517841 403 ntBASIC5.18□□□□□ -1.58
TRAPPC4Q9Y296 AC021678.3-201ENST00000517893 476 ntBASIC5.18□□□□□ -1.58
TRAPPC4Q9Y296 OR8A2P-201ENST00000528631 952 ntBASIC5.18□□□□□ -1.58
TRAPPC4Q9Y296 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.18□□□□□ -1.58
TRAPPC4Q9Y296 AC068993.1-201ENST00000546724 589 ntBASIC5.18□□□□□ -1.58
TRAPPC4Q9Y296 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.18□□□□□ -1.58
TRAPPC4Q9Y296 AC096996.1-201ENST00000563813 325 ntBASIC5.18□□□□□ -1.58
TRAPPC4Q9Y296 NDUFA5P11-201ENST00000567995 343 ntBASIC5.18□□□□□ -1.58
TRAPPC4Q9Y296 AC023389.2-201ENST00000580031 955 ntBASIC5.18□□□□□ -1.58
TRAPPC4Q9Y296 AC005726.4-201ENST00000582858 458 ntBASIC5.18□□□□□ -1.58
TRAPPC4Q9Y296 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.18□□□□□ -1.58
TRAPPC4Q9Y296 AC022919.1-201ENST00000624979 626 ntBASIC5.18□□□□□ -1.58
TRAPPC4Q9Y296 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC5.18□□□□□ -1.58
TRAPPC4Q9Y296 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TRAPPC4Q9Y296 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
TRAPPC4Q9Y296 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
TRAPPC4Q9Y296 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
TRAPPC4Q9Y296 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
TRAPPC4Q9Y296 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
TRAPPC4Q9Y296 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TRAPPC4Q9Y296 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TRAPPC4Q9Y296 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TRAPPC4Q9Y296 AC006206.1-201ENST00000544842 3387 ntBASIC5.17□□□□□ -1.58
TRAPPC4Q9Y296 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.17□□□□□ -1.58
TRAPPC4Q9Y296 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.17□□□□□ -1.58
TRAPPC4Q9Y296 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
TRAPPC4Q9Y296 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.17□□□□□ -1.58
TRAPPC4Q9Y296 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TRAPPC4Q9Y296 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.17□□□□□ -1.58
TRAPPC4Q9Y296 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TRAPPC4Q9Y296 RNA5SP91-201ENST00000390902 119 ntBASIC5.17□□□□□ -1.58
TRAPPC4Q9Y296 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.17□□□□□ -1.58
TRAPPC4Q9Y296 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.17□□□□□ -1.58
TRAPPC4Q9Y296 NIFKP3-201ENST00000417799 865 ntBASIC5.17□□□□□ -1.58
TRAPPC4Q9Y296 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
TRAPPC4Q9Y296 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.17□□□□□ -1.58
TRAPPC4Q9Y296 AL445665.1-202ENST00000452436 324 ntBASIC5.17□□□□□ -1.58
TRAPPC4Q9Y296 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.17□□□□□ -1.58
TRAPPC4Q9Y296 SNORD125-201ENST00000459538 96 ntBASIC5.17□□□□□ -1.58
TRAPPC4Q9Y296 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.17□□□□□ -1.58
TRAPPC4Q9Y296 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TRAPPC4Q9Y296 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.17□□□□□ -1.58
TRAPPC4Q9Y296 AC114781.3-201ENST00000512083 142 ntBASIC5.17□□□□□ -1.58
TRAPPC4Q9Y296 SCARNA6.1-201ENST00000516989 238 ntBASIC5.17□□□□□ -1.58
TRAPPC4Q9Y296 AC139365.2-201ENST00000517972 253 ntBASIC5.17□□□□□ -1.58
TRAPPC4Q9Y296 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.17□□□□□ -1.58
TRAPPC4Q9Y296 OR4A17P-201ENST00000526032 904 ntBASIC5.17□□□□□ -1.58
TRAPPC4Q9Y296 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.17□□□□□ -1.58
TRAPPC4Q9Y296 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
TRAPPC4Q9Y296 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.17□□□□□ -1.58
TRAPPC4Q9Y296 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.17□□□□□ -1.58
TRAPPC4Q9Y296 AC079600.1-201ENST00000550326 297 ntBASIC5.17□□□□□ -1.58
TRAPPC4Q9Y296 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.17□□□□□ -1.58
TRAPPC4Q9Y296 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
TRAPPC4Q9Y296 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TRAPPC4Q9Y296 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TRAPPC4Q9Y296 HIRAP1-201ENST00000605318 787 ntBASIC5.17□□□□□ -1.58
TRAPPC4Q9Y296 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.17□□□□□ -1.58
TRAPPC4Q9Y296 AC241377.1-201ENST00000619797 406 ntBASIC5.17□□□□□ -1.58
TRAPPC4Q9Y296 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
TRAPPC4Q9Y296 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.17□□□□□ -1.58
TRAPPC4Q9Y296 TCP1P3-201ENST00000414406 1498 ntBASIC5.17□□□□□ -1.58
TRAPPC4Q9Y296 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.17□□□□□ -1.58
TRAPPC4Q9Y296 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
TRAPPC4Q9Y296 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TRAPPC4Q9Y296 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TRAPPC4Q9Y296 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRAPPC4Q9Y296 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRAPPC4Q9Y296 NEPNP-201ENST00000404786 1371 ntBASIC5.16□□□□□ -1.58
TRAPPC4Q9Y296 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.16□□□□□ -1.58
TRAPPC4Q9Y296 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.16□□□□□ -1.58
TRAPPC4Q9Y296 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms