Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 AC074386.1-201ENST00000476560 767 ntBASIC9.96□□□□□ -0.82
TRIM35Q9UPQ4 GRHL1-206ENST00000480736 572 ntTSL 4 BASIC9.96□□□□□ -0.82
TRIM35Q9UPQ4 ACTG1P13-201ENST00000486987 1043 ntBASIC9.96□□□□□ -0.82
TRIM35Q9UPQ4 NPY6R-201ENST00000503807 1112 ntBASIC9.96□□□□□ -0.82
TRIM35Q9UPQ4 AC005741.1-201ENST00000511094 432 ntBASIC9.96□□□□□ -0.82
TRIM35Q9UPQ4 LINC01608-202ENST00000524283 561 ntTSL 4 BASIC9.96□□□□□ -0.82
TRIM35Q9UPQ4 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC9.96□□□□□ -0.82
TRIM35Q9UPQ4 AC027544.3-201ENST00000535082 757 ntBASIC9.96□□□□□ -0.82
TRIM35Q9UPQ4 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC9.96□□□□□ -0.82
TRIM35Q9UPQ4 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
TRIM35Q9UPQ4 AC063950.1-201ENST00000552036 308 ntBASIC9.96□□□□□ -0.82
TRIM35Q9UPQ4 AC026464.1-202ENST00000564737 722 ntAPPRIS P5 TSL 5 BASIC9.96□□□□□ -0.82
TRIM35Q9UPQ4 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC9.96□□□□□ -0.82
TRIM35Q9UPQ4 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC9.96□□□□□ -0.82
TRIM35Q9UPQ4 SLFN5-203ENST00000592325 1225 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
TRIM35Q9UPQ4 OR7E94P-202ENST00000601375 790 ntBASIC9.96□□□□□ -0.82
TRIM35Q9UPQ4 AC024085.1-201ENST00000604299 432 ntBASIC9.96□□□□□ -0.82
TRIM35Q9UPQ4 U47924.1-201ENST00000606539 434 ntBASIC9.96□□□□□ -0.82
TRIM35Q9UPQ4 AC103710.3-201ENST00000608157 948 ntBASIC9.96□□□□□ -0.82
TRIM35Q9UPQ4 MIR6829-201ENST00000620375 67 ntBASIC9.96□□□□□ -0.82
TRIM35Q9UPQ4 OXSM-209ENST00000626005 309 ntTSL 3 BASIC9.96□□□□□ -0.82
TRIM35Q9UPQ4 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC9.96□□□□□ -0.82
TRIM35Q9UPQ4 STXBP5-204ENST00000367481 9177 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
TRIM35Q9UPQ4 GON4L-218ENST00000620426 5506 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
TRIM35Q9UPQ4 AC073055.1-201ENST00000456901 1621 ntBASIC9.96□□□□□ -0.82
TRIM35Q9UPQ4 ASNSP1-204ENST00000641977 1664 ntBASIC9.96□□□□□ -0.82
TRIM35Q9UPQ4 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
TRIM35Q9UPQ4 DAZ2-208ENST00000400493 3516 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
TRIM35Q9UPQ4 BBX-207ENST00000416476 2178 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
TRIM35Q9UPQ4 HIST1H2BN-203ENST00000606613 4137 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
TRIM35Q9UPQ4 COLGALT2-203ENST00000367521 4723 ntTSL 2 BASIC9.95□□□□□ -0.82
TRIM35Q9UPQ4 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
TRIM35Q9UPQ4 GLRA2-201ENST00000218075 3216 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
TRIM35Q9UPQ4 NRP1-207ENST00000374875 5407 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
TRIM35Q9UPQ4 U3.1-201ENST00000362500 215 ntBASIC9.95□□□□□ -0.82
TRIM35Q9UPQ4 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
TRIM35Q9UPQ4 ALOX5AP-201ENST00000380490 904 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
TRIM35Q9UPQ4 RNU2-64P-201ENST00000411315 191 ntBASIC9.95□□□□□ -0.82
TRIM35Q9UPQ4 AC093642.1-201ENST00000412193 565 ntTSL 3 BASIC9.95□□□□□ -0.82
TRIM35Q9UPQ4 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC9.95□□□□□ -0.82
TRIM35Q9UPQ4 NPM1P40-201ENST00000412758 733 ntBASIC9.95□□□□□ -0.82
TRIM35Q9UPQ4 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
TRIM35Q9UPQ4 NAP1L1P2-201ENST00000414182 1089 ntBASIC9.95□□□□□ -0.82
TRIM35Q9UPQ4 AC023141.1-201ENST00000419418 379 ntBASIC9.95□□□□□ -0.82
TRIM35Q9UPQ4 MYB-206ENST00000420123 1051 ntTSL 5 BASIC9.95□□□□□ -0.82
TRIM35Q9UPQ4 NANOGP4-201ENST00000427230 913 ntBASIC9.95□□□□□ -0.82
TRIM35Q9UPQ4 LINC01852-201ENST00000434223 967 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
TRIM35Q9UPQ4 CACYBPP1-201ENST00000438592 684 ntBASIC9.95□□□□□ -0.82
TRIM35Q9UPQ4 HMGB3P12-201ENST00000438745 556 ntBASIC9.95□□□□□ -0.82
TRIM35Q9UPQ4 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC9.95□□□□□ -0.82
TRIM35Q9UPQ4 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC9.95□□□□□ -0.82
TRIM35Q9UPQ4 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC9.95□□□□□ -0.82
TRIM35Q9UPQ4 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC9.95□□□□□ -0.82
TRIM35Q9UPQ4 RPL7P14-201ENST00000449851 741 ntBASIC9.95□□□□□ -0.82
TRIM35Q9UPQ4 AC092570.2-201ENST00000452117 1143 ntBASIC9.95□□□□□ -0.82
TRIM35Q9UPQ4 RN7SL55P-201ENST00000464534 297 ntBASIC9.95□□□□□ -0.82
TRIM35Q9UPQ4 RN7SL308P-201ENST00000464971 297 ntBASIC9.95□□□□□ -0.82
TRIM35Q9UPQ4 PFN2-209ENST00000481275 560 ntTSL 4 BASIC9.95□□□□□ -0.82
TRIM35Q9UPQ4 CREM-234ENST00000484283 660 ntTSL 5 BASIC9.95□□□□□ -0.82
TRIM35Q9UPQ4 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC9.95□□□□□ -0.82
TRIM35Q9UPQ4 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC9.95□□□□□ -0.82
TRIM35Q9UPQ4 Y_RNA.691-201ENST00000516611 103 ntBASIC9.95□□□□□ -0.82
TRIM35Q9UPQ4 RNU6-1137P-201ENST00000517073 99 ntBASIC9.95□□□□□ -0.82
TRIM35Q9UPQ4 KCTD9P4-201ENST00000526766 1166 ntBASIC9.95□□□□□ -0.82
TRIM35Q9UPQ4 OR7E87P-201ENST00000532397 929 ntBASIC9.95□□□□□ -0.82
TRIM35Q9UPQ4 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC9.95□□□□□ -0.82
TRIM35Q9UPQ4 RPS7P1-201ENST00000571702 585 ntBASIC9.95□□□□□ -0.82
TRIM35Q9UPQ4 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC9.95□□□□□ -0.82
TRIM35Q9UPQ4 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC9.95□□□□□ -0.82
TRIM35Q9UPQ4 AC073389.2-201ENST00000606726 571 ntTSL 4 BASIC9.95□□□□□ -0.82
TRIM35Q9UPQ4 AL445670.1-201ENST00000618889 801 ntBASIC9.95□□□□□ -0.82
TRIM35Q9UPQ4 YAF2-201ENST00000327791 4156 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
TRIM35Q9UPQ4 BDNF-201ENST00000314915 4340 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
TRIM35Q9UPQ4 SF3A3P1-201ENST00000446317 1477 ntBASIC9.95□□□□□ -0.82
TRIM35Q9UPQ4 AC007126.1-201ENST00000508202 4781 ntBASIC9.95□□□□□ -0.82
TRIM35Q9UPQ4 AKT3-202ENST00000336199 1688 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
TRIM35Q9UPQ4 AF131215.2-201ENST00000531549 1710 ntBASIC9.95□□□□□ -0.82
TRIM35Q9UPQ4 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC9.95□□□□□ -0.82
TRIM35Q9UPQ4 ARNTL2-203ENST00000311001 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
TRIM35Q9UPQ4 HDAC2-AS2-208ENST00000519104 2016 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
TRIM35Q9UPQ4 HEPACAM2-202ENST00000394468 2148 ntAPPRIS ALT2 TSL 2 BASIC9.95□□□□□ -0.82
TRIM35Q9UPQ4 C4orf46-202ENST00000508457 3358 ntTSL 5 BASIC9.95□□□□□ -0.82
TRIM35Q9UPQ4 IARS-205ENST00000443024 4341 ntTSL 5 BASIC9.95□□□□□ -0.82
TRIM35Q9UPQ4 MYOM1-201ENST00000261606 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 LAMP2-202ENST00000371335 4030 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 C7orf31-202ENST00000409280 3357 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 OSGEPL1-204ENST00000519810 2216 ntTSL 2 BASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 LRP1-201ENST00000243077 14897 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 GTF2IP1-202ENST00000614592 2047 ntBASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 AL049776.1-201ENST00000624600 2025 ntBASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 AP001527.1-201ENST00000566440 1957 ntBASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 ITSN2-202ENST00000361999 5814 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 CSF2RA-206ENST00000381529 1816 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 OR10W1-201ENST00000395079 1469 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 EEF1A1P5-201ENST00000436459 1389 ntBASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 AL390760.1-201ENST00000366188 410 ntTSL 5 BASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 C1orf54-203ENST00000369102 1251 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 COQ3-202ENST00000369240 646 ntTSL 5 BASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC9.94□□□□□ -0.82
TRIM35Q9UPQ4 PARD3-204ENST00000374768 799 ntTSL 3 BASIC9.94□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms