Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NPIPA1Q9UND3 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
NPIPA1Q9UND3 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
NPIPA1Q9UND3 GVINP1-202ENST00000531871 7271 ntBASIC5.31□□□□□ -1.56
NPIPA1Q9UND3 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
NPIPA1Q9UND3 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.31□□□□□ -1.56
NPIPA1Q9UND3 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
NPIPA1Q9UND3 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NPIPA1Q9UND3 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
NPIPA1Q9UND3 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NPIPA1Q9UND3 AL161912.4-201ENST00000623889 2468 ntBASIC5.31□□□□□ -1.56
NPIPA1Q9UND3 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NPIPA1Q9UND3 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NPIPA1Q9UND3 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.31□□□□□ -1.56
NPIPA1Q9UND3 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.3□□□□□ -1.56
NPIPA1Q9UND3 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NPIPA1Q9UND3 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
NPIPA1Q9UND3 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NPIPA1Q9UND3 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.3□□□□□ -1.56
NPIPA1Q9UND3 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NPIPA1Q9UND3 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.3□□□□□ -1.56
NPIPA1Q9UND3 RN7SKP160-201ENST00000363804 340 ntBASIC5.3□□□□□ -1.56
NPIPA1Q9UND3 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
NPIPA1Q9UND3 AC016769.2-201ENST00000414815 475 ntBASIC5.3□□□□□ -1.56
NPIPA1Q9UND3 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.3□□□□□ -1.56
NPIPA1Q9UND3 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.3□□□□□ -1.56
NPIPA1Q9UND3 BTG3P1-201ENST00000435859 716 ntBASIC5.3□□□□□ -1.56
NPIPA1Q9UND3 AC023141.8-201ENST00000442554 208 ntBASIC5.3□□□□□ -1.56
NPIPA1Q9UND3 RPS23P6-201ENST00000466136 431 ntBASIC5.3□□□□□ -1.56
NPIPA1Q9UND3 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.3□□□□□ -1.56
NPIPA1Q9UND3 AC138866.2-201ENST00000508650 584 ntBASIC5.3□□□□□ -1.56
NPIPA1Q9UND3 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.3□□□□□ -1.56
NPIPA1Q9UND3 ASNSP4-201ENST00000511103 447 ntBASIC5.3□□□□□ -1.56
NPIPA1Q9UND3 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.3□□□□□ -1.56
NPIPA1Q9UND3 SCARNA6.1-201ENST00000516989 238 ntBASIC5.3□□□□□ -1.56
NPIPA1Q9UND3 IGKV2-19-201ENST00000518132 283 ntBASIC5.3□□□□□ -1.56
NPIPA1Q9UND3 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC5.3□□□□□ -1.56
NPIPA1Q9UND3 HMGB1P42-201ENST00000532126 553 ntBASIC5.3□□□□□ -1.56
NPIPA1Q9UND3 AC090424.1-201ENST00000535243 736 ntBASIC5.3□□□□□ -1.56
NPIPA1Q9UND3 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.3□□□□□ -1.56
NPIPA1Q9UND3 MTND2P17-201ENST00000550281 688 ntBASIC5.3□□□□□ -1.56
NPIPA1Q9UND3 AL049872.1-201ENST00000556323 322 ntBASIC5.3□□□□□ -1.56
NPIPA1Q9UND3 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.3□□□□□ -1.56
NPIPA1Q9UND3 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.3□□□□□ -1.56
NPIPA1Q9UND3 AC010547.7-201ENST00000570323 333 ntBASIC5.3□□□□□ -1.56
NPIPA1Q9UND3 MIR4260-201ENST00000583107 67 ntBASIC5.3□□□□□ -1.56
NPIPA1Q9UND3 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
NPIPA1Q9UND3 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
NPIPA1Q9UND3 AL592429.1-201ENST00000403909 1473 ntBASIC5.3□□□□□ -1.56
NPIPA1Q9UND3 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.3□□□□□ -1.56
NPIPA1Q9UND3 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NPIPA1Q9UND3 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
NPIPA1Q9UND3 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
NPIPA1Q9UND3 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NPIPA1Q9UND3 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.3□□□□□ -1.56
NPIPA1Q9UND3 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.3□□□□□ -1.56
NPIPA1Q9UND3 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.3□□□□□ -1.56
NPIPA1Q9UND3 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NPIPA1Q9UND3 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.29□□□□□ -1.56
NPIPA1Q9UND3 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.29□□□□□ -1.56
NPIPA1Q9UND3 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.29□□□□□ -1.56
NPIPA1Q9UND3 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NPIPA1Q9UND3 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.29□□□□□ -1.56
NPIPA1Q9UND3 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NPIPA1Q9UND3 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.29□□□□□ -1.56
NPIPA1Q9UND3 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NPIPA1Q9UND3 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NPIPA1Q9UND3 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NPIPA1Q9UND3 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
NPIPA1Q9UND3 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.29□□□□□ -1.56
NPIPA1Q9UND3 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
NPIPA1Q9UND3 U3.23-201ENST00000391132 200 ntBASIC5.29□□□□□ -1.56
NPIPA1Q9UND3 AL589994.1-201ENST00000404962 340 ntBASIC5.29□□□□□ -1.56
NPIPA1Q9UND3 Z93019.1-201ENST00000416450 973 ntBASIC5.29□□□□□ -1.56
NPIPA1Q9UND3 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.29□□□□□ -1.56
NPIPA1Q9UND3 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.29□□□□□ -1.56
NPIPA1Q9UND3 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
NPIPA1Q9UND3 Z84478.1-201ENST00000438230 1219 ntBASIC5.29□□□□□ -1.56
NPIPA1Q9UND3 OR7E157P-201ENST00000494376 911 ntBASIC5.29□□□□□ -1.56
NPIPA1Q9UND3 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.29□□□□□ -1.56
NPIPA1Q9UND3 RNU6-615P-201ENST00000516065 106 ntBASIC5.29□□□□□ -1.56
NPIPA1Q9UND3 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.29□□□□□ -1.56
NPIPA1Q9UND3 IGLV2-28-201ENST00000520681 304 ntBASIC5.29□□□□□ -1.56
NPIPA1Q9UND3 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.29□□□□□ -1.56
NPIPA1Q9UND3 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.29□□□□□ -1.56
NPIPA1Q9UND3 IGBP1P1-201ENST00000554337 1009 ntBASIC5.29□□□□□ -1.56
NPIPA1Q9UND3 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.29□□□□□ -1.56
NPIPA1Q9UND3 AC051619.2-201ENST00000559063 397 ntBASIC5.29□□□□□ -1.56
NPIPA1Q9UND3 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.29□□□□□ -1.56
NPIPA1Q9UND3 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.29□□□□□ -1.56
NPIPA1Q9UND3 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC5.29□□□□□ -1.56
NPIPA1Q9UND3 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.29□□□□□ -1.56
NPIPA1Q9UND3 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.29□□□□□ -1.56
NPIPA1Q9UND3 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.29□□□□□ -1.56
NPIPA1Q9UND3 AC008115.3-201ENST00000614874 549 ntBASIC5.29□□□□□ -1.56
NPIPA1Q9UND3 AL355974.3-201ENST00000617383 467 ntBASIC5.29□□□□□ -1.56
NPIPA1Q9UND3 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.29□□□□□ -1.56
NPIPA1Q9UND3 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NPIPA1Q9UND3 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NPIPA1Q9UND3 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms