Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC8.3□□□□□ -1.08
USP35Q9P2H5 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC8.3□□□□□ -1.08
USP35Q9P2H5 RAD1P1-201ENST00000231383 813 ntBASIC8.3□□□□□ -1.08
USP35Q9P2H5 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
USP35Q9P2H5 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC8.3□□□□□ -1.08
USP35Q9P2H5 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC8.3□□□□□ -1.08
USP35Q9P2H5 RNU6-1263P-201ENST00000384601 106 ntBASIC8.3□□□□□ -1.08
USP35Q9P2H5 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
USP35Q9P2H5 AC096537.2-201ENST00000413707 714 ntBASIC8.3□□□□□ -1.08
USP35Q9P2H5 SDHDP6-201ENST00000414693 480 ntBASIC8.3□□□□□ -1.08
USP35Q9P2H5 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC8.3□□□□□ -1.08
USP35Q9P2H5 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
USP35Q9P2H5 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC8.3□□□□□ -1.08
USP35Q9P2H5 AL163193.1-201ENST00000444895 788 ntBASIC8.3□□□□□ -1.08
USP35Q9P2H5 MTND2P6-201ENST00000455337 1030 ntBASIC8.3□□□□□ -1.08
USP35Q9P2H5 MTND2P39-201ENST00000457230 764 ntBASIC8.3□□□□□ -1.08
USP35Q9P2H5 AC092691.2-201ENST00000461787 803 ntBASIC8.3□□□□□ -1.08
USP35Q9P2H5 RN7SL799P-201ENST00000475891 298 ntBASIC8.3□□□□□ -1.08
USP35Q9P2H5 RN7SL561P-201ENST00000488553 281 ntBASIC8.3□□□□□ -1.08
USP35Q9P2H5 AC090958.1-201ENST00000511122 351 ntBASIC8.3□□□□□ -1.08
USP35Q9P2H5 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC8.3□□□□□ -1.08
USP35Q9P2H5 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC8.3□□□□□ -1.08
USP35Q9P2H5 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC8.3□□□□□ -1.08
USP35Q9P2H5 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC8.3□□□□□ -1.08
USP35Q9P2H5 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC8.3□□□□□ -1.08
USP35Q9P2H5 MIR4433B-201ENST00000581329 102 ntBASIC8.3□□□□□ -1.08
USP35Q9P2H5 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC8.3□□□□□ -1.08
USP35Q9P2H5 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC8.3□□□□□ -1.08
USP35Q9P2H5 SNX6P1-201ENST00000601728 1224 ntBASIC8.3□□□□□ -1.08
USP35Q9P2H5 BNIP3P19-201ENST00000605397 577 ntBASIC8.3□□□□□ -1.08
USP35Q9P2H5 AL591167.1-201ENST00000607321 456 ntBASIC8.3□□□□□ -1.08
USP35Q9P2H5 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC8.3□□□□□ -1.08
USP35Q9P2H5 AC245389.2-201ENST00000616023 576 ntBASIC8.3□□□□□ -1.08
USP35Q9P2H5 AC242843.1-201ENST00000618702 573 ntBASIC8.3□□□□□ -1.08
USP35Q9P2H5 AC097460.3-201ENST00000623099 442 ntBASIC8.3□□□□□ -1.08
USP35Q9P2H5 RPL23AP61-201ENST00000623642 466 ntBASIC8.3□□□□□ -1.08
USP35Q9P2H5 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
USP35Q9P2H5 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
USP35Q9P2H5 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC8.3□□□□□ -1.08
USP35Q9P2H5 STK3-216ENST00000523601 3107 ntTSL 2 BASIC8.3□□□□□ -1.08
USP35Q9P2H5 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
USP35Q9P2H5 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
USP35Q9P2H5 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
USP35Q9P2H5 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
USP35Q9P2H5 WDR95P-201ENST00000425638 1542 ntBASIC8.29□□□□□ -1.08
USP35Q9P2H5 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC8.29□□□□□ -1.08
USP35Q9P2H5 AC123769.1-201ENST00000530992 3192 ntBASIC8.29□□□□□ -1.08
USP35Q9P2H5 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
USP35Q9P2H5 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC8.29□□□□□ -1.08
USP35Q9P2H5 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
USP35Q9P2H5 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
USP35Q9P2H5 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
USP35Q9P2H5 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
USP35Q9P2H5 RNU1-150P-201ENST00000362491 162 ntBASIC8.29□□□□□ -1.08
USP35Q9P2H5 RN7SKP160-201ENST00000363804 340 ntBASIC8.29□□□□□ -1.08
USP35Q9P2H5 RNU1-46P-201ENST00000384425 164 ntBASIC8.29□□□□□ -1.08
USP35Q9P2H5 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC8.29□□□□□ -1.08
USP35Q9P2H5 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
USP35Q9P2H5 NPM1P22-201ENST00000427761 952 ntBASIC8.29□□□□□ -1.08
USP35Q9P2H5 PPIAP10-201ENST00000438675 458 ntBASIC8.29□□□□□ -1.08
USP35Q9P2H5 VN1R110P-201ENST00000438988 971 ntBASIC8.29□□□□□ -1.08
USP35Q9P2H5 FTLP8-201ENST00000446770 267 ntBASIC8.29□□□□□ -1.08
USP35Q9P2H5 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC8.29□□□□□ -1.08
USP35Q9P2H5 AC091544.1-201ENST00000484702 348 ntBASIC8.29□□□□□ -1.08
USP35Q9P2H5 AC104629.1-201ENST00000494226 508 ntBASIC8.29□□□□□ -1.08
USP35Q9P2H5 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC8.29□□□□□ -1.08
USP35Q9P2H5 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC8.29□□□□□ -1.08
USP35Q9P2H5 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
USP35Q9P2H5 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
USP35Q9P2H5 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC8.29□□□□□ -1.08
USP35Q9P2H5 AC025171.4-201ENST00000607250 1047 ntBASIC8.29□□□□□ -1.08
USP35Q9P2H5 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC8.29□□□□□ -1.08
USP35Q9P2H5 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC8.29□□□□□ -1.08
USP35Q9P2H5 AC011369.2-201ENST00000624423 1567 ntBASIC8.29□□□□□ -1.08
USP35Q9P2H5 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
USP35Q9P2H5 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC8.29□□□□□ -1.08
USP35Q9P2H5 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
USP35Q9P2H5 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
USP35Q9P2H5 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
USP35Q9P2H5 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
USP35Q9P2H5 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC8.29□□□□□ -1.08
USP35Q9P2H5 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC8.29□□□□□ -1.08
USP35Q9P2H5 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
USP35Q9P2H5 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
USP35Q9P2H5 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
USP35Q9P2H5 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC8.28□□□□□ -1.08
USP35Q9P2H5 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
USP35Q9P2H5 AC022325.1-201ENST00000502748 2199 ntBASIC8.28□□□□□ -1.08
USP35Q9P2H5 AC110373.1-201ENST00000505994 3505 ntBASIC8.28□□□□□ -1.08
USP35Q9P2H5 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC8.28□□□□□ -1.08
USP35Q9P2H5 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC8.28□□□□□ -1.08
USP35Q9P2H5 AL592429.1-201ENST00000403909 1473 ntBASIC8.28□□□□□ -1.08
USP35Q9P2H5 RNU1-49P-201ENST00000363468 159 ntBASIC8.28□□□□□ -1.08
USP35Q9P2H5 MIR143-201ENST00000385300 106 ntBASIC8.28□□□□□ -1.08
USP35Q9P2H5 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
USP35Q9P2H5 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC8.28□□□□□ -1.08
USP35Q9P2H5 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC8.28□□□□□ -1.08
USP35Q9P2H5 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC8.28□□□□□ -1.08
USP35Q9P2H5 BX284632.2-201ENST00000421091 399 ntBASIC8.28□□□□□ -1.08
USP35Q9P2H5 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC8.28□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 165.1 ms