Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC110792.3-201ENST00000595906 1614 ntBASIC6.58□□□□□ -1.36
COL20A1Q9P218 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL20A1Q9P218 LINC02019-201ENST00000608605 2060 ntBASIC6.57□□□□□ -1.36
COL20A1Q9P218 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
COL20A1Q9P218 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL20A1Q9P218 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL20A1Q9P218 MAPK10-270ENST00000641102 3538 ntBASIC6.57□□□□□ -1.36
COL20A1Q9P218 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL20A1Q9P218 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL20A1Q9P218 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
COL20A1Q9P218 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
COL20A1Q9P218 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL20A1Q9P218 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.57□□□□□ -1.36
COL20A1Q9P218 RNA5SP132-201ENST00000364725 118 ntBASIC6.57□□□□□ -1.36
COL20A1Q9P218 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL20A1Q9P218 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL20A1Q9P218 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.57□□□□□ -1.36
COL20A1Q9P218 NME1P1-201ENST00000420914 382 ntBASIC6.57□□□□□ -1.36
COL20A1Q9P218 BX510359.3-201ENST00000422168 306 ntBASIC6.57□□□□□ -1.36
COL20A1Q9P218 AL121882.1-201ENST00000422893 417 ntBASIC6.57□□□□□ -1.36
COL20A1Q9P218 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC6.57□□□□□ -1.36
COL20A1Q9P218 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC6.57□□□□□ -1.36
COL20A1Q9P218 RAB28P3-201ENST00000448325 597 ntBASIC6.57□□□□□ -1.36
COL20A1Q9P218 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC6.57□□□□□ -1.36
COL20A1Q9P218 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.57□□□□□ -1.36
COL20A1Q9P218 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC6.57□□□□□ -1.36
COL20A1Q9P218 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC6.57□□□□□ -1.36
COL20A1Q9P218 EIF2S2P4-201ENST00000461070 984 ntBASIC6.57□□□□□ -1.36
COL20A1Q9P218 RN7SL177P-201ENST00000476596 299 ntBASIC6.57□□□□□ -1.36
COL20A1Q9P218 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC6.57□□□□□ -1.36
COL20A1Q9P218 AK4P6-201ENST00000505168 528 ntBASIC6.57□□□□□ -1.36
COL20A1Q9P218 AC109481.1-201ENST00000509173 282 ntBASIC6.57□□□□□ -1.36
COL20A1Q9P218 TOMM22P4-201ENST00000511318 336 ntBASIC6.57□□□□□ -1.36
COL20A1Q9P218 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.57□□□□□ -1.36
COL20A1Q9P218 IGLVIV-66-1-201ENST00000521832 460 ntBASIC6.57□□□□□ -1.36
COL20A1Q9P218 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC6.57□□□□□ -1.36
COL20A1Q9P218 AC090424.1-201ENST00000535243 736 ntBASIC6.57□□□□□ -1.36
COL20A1Q9P218 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC6.57□□□□□ -1.36
COL20A1Q9P218 AC090022.1-201ENST00000546569 311 ntBASIC6.57□□□□□ -1.36
COL20A1Q9P218 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.57□□□□□ -1.36
COL20A1Q9P218 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.57□□□□□ -1.36
COL20A1Q9P218 MIR1273E-201ENST00000581165 102 ntBASIC6.57□□□□□ -1.36
COL20A1Q9P218 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
COL20A1Q9P218 AC005224.3-201ENST00000584683 2140 ntBASIC6.57□□□□□ -1.36
COL20A1Q9P218 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC6.57□□□□□ -1.36
COL20A1Q9P218 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.57□□□□□ -1.36
COL20A1Q9P218 AC110792.4-201ENST00000609843 298 ntBASIC6.57□□□□□ -1.36
COL20A1Q9P218 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.57□□□□□ -1.36
COL20A1Q9P218 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC6.57□□□□□ -1.36
COL20A1Q9P218 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL20A1Q9P218 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL20A1Q9P218 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.57□□□□□ -1.36
COL20A1Q9P218 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL20A1Q9P218 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
COL20A1Q9P218 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.57□□□□□ -1.36
COL20A1Q9P218 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL20A1Q9P218 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL20A1Q9P218 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL20A1Q9P218 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL20A1Q9P218 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL20A1Q9P218 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL20A1Q9P218 AC130360.2-201ENST00000533477 1556 ntBASIC6.57□□□□□ -1.36
COL20A1Q9P218 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
COL20A1Q9P218 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
COL20A1Q9P218 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.56□□□□□ -1.36
COL20A1Q9P218 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.56□□□□□ -1.36
COL20A1Q9P218 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL20A1Q9P218 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.56□□□□□ -1.36
COL20A1Q9P218 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL20A1Q9P218 AC027279.4-201ENST00000624371 2072 ntBASIC6.56□□□□□ -1.36
COL20A1Q9P218 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL20A1Q9P218 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COL20A1Q9P218 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL20A1Q9P218 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL20A1Q9P218 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.56□□□□□ -1.36
COL20A1Q9P218 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
COL20A1Q9P218 SNORA70H-201ENST00000383910 135 ntBASIC6.56□□□□□ -1.36
COL20A1Q9P218 SNORA70J-201ENST00000384182 135 ntBASIC6.56□□□□□ -1.36
COL20A1Q9P218 NENFP1-201ENST00000419476 466 ntBASIC6.56□□□□□ -1.36
COL20A1Q9P218 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC6.56□□□□□ -1.36
COL20A1Q9P218 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.56□□□□□ -1.36
COL20A1Q9P218 AC012075.1-201ENST00000436549 580 ntBASIC6.56□□□□□ -1.36
COL20A1Q9P218 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC6.56□□□□□ -1.36
COL20A1Q9P218 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC6.56□□□□□ -1.36
COL20A1Q9P218 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.56□□□□□ -1.36
COL20A1Q9P218 SLC25A51P1-201ENST00000468432 871 ntBASIC6.56□□□□□ -1.36
COL20A1Q9P218 AC104629.2-201ENST00000468627 598 ntBASIC6.56□□□□□ -1.36
COL20A1Q9P218 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COL20A1Q9P218 RPS3AP15-201ENST00000483874 781 ntBASIC6.56□□□□□ -1.36
COL20A1Q9P218 DUTP7-201ENST00000507982 486 ntBASIC6.56□□□□□ -1.36
COL20A1Q9P218 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC6.56□□□□□ -1.36
COL20A1Q9P218 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC6.56□□□□□ -1.36
COL20A1Q9P218 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC6.56□□□□□ -1.36
COL20A1Q9P218 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC6.56□□□□□ -1.36
COL20A1Q9P218 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.56□□□□□ -1.36
COL20A1Q9P218 AP003102.1-201ENST00000525638 661 ntBASIC6.56□□□□□ -1.36
COL20A1Q9P218 AC027026.1-201ENST00000532323 742 ntBASIC6.56□□□□□ -1.36
COL20A1Q9P218 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC6.56□□□□□ -1.36
COL20A1Q9P218 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.56□□□□□ -1.36
COL20A1Q9P218 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms