Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC6.86□□□□□ -1.31
VTA1Q9NP79 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.86□□□□□ -1.31
VTA1Q9NP79 AP005431.1-201ENST00000618479 319 ntBASIC6.86□□□□□ -1.31
VTA1Q9NP79 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC6.86□□□□□ -1.31
VTA1Q9NP79 AC015722.2-201ENST00000622210 551 ntBASIC6.86□□□□□ -1.31
VTA1Q9NP79 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC6.86□□□□□ -1.31
VTA1Q9NP79 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC6.86□□□□□ -1.31
VTA1Q9NP79 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.86□□□□□ -1.31
VTA1Q9NP79 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC6.86□□□□□ -1.31
VTA1Q9NP79 OR8G3P-202ENST00000641572 1255 ntBASIC6.86□□□□□ -1.31
VTA1Q9NP79 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.86□□□□□ -1.31
VTA1Q9NP79 AL359091.1-201ENST00000449048 1734 ntBASIC6.86□□□□□ -1.31
VTA1Q9NP79 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.86□□□□□ -1.31
VTA1Q9NP79 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
VTA1Q9NP79 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
VTA1Q9NP79 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
VTA1Q9NP79 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.85□□□□□ -1.31
VTA1Q9NP79 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.85□□□□□ -1.31
VTA1Q9NP79 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.85□□□□□ -1.31
VTA1Q9NP79 PABPC1P8-201ENST00000452851 2086 ntBASIC6.85□□□□□ -1.31
VTA1Q9NP79 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
VTA1Q9NP79 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
VTA1Q9NP79 RNU4-64P-201ENST00000410795 131 ntBASIC6.85□□□□□ -1.31
VTA1Q9NP79 RNU4-27P-201ENST00000410889 139 ntBASIC6.85□□□□□ -1.31
VTA1Q9NP79 RN7SKP286-201ENST00000410894 299 ntBASIC6.85□□□□□ -1.31
VTA1Q9NP79 RN7SKP161-201ENST00000411110 305 ntBASIC6.85□□□□□ -1.31
VTA1Q9NP79 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC6.85□□□□□ -1.31
VTA1Q9NP79 SDHDP6-201ENST00000414693 480 ntBASIC6.85□□□□□ -1.31
VTA1Q9NP79 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.85□□□□□ -1.31
VTA1Q9NP79 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.85□□□□□ -1.31
VTA1Q9NP79 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.85□□□□□ -1.31
VTA1Q9NP79 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.85□□□□□ -1.31
VTA1Q9NP79 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
VTA1Q9NP79 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
VTA1Q9NP79 RAB28P2-201ENST00000454299 641 ntBASIC6.85□□□□□ -1.31
VTA1Q9NP79 RPS27AP2-201ENST00000457576 465 ntBASIC6.85□□□□□ -1.31
VTA1Q9NP79 AC023245.1-201ENST00000468501 517 ntBASIC6.85□□□□□ -1.31
VTA1Q9NP79 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.85□□□□□ -1.31
VTA1Q9NP79 AC098862.1-201ENST00000504991 413 ntBASIC6.85□□□□□ -1.31
VTA1Q9NP79 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC6.85□□□□□ -1.31
VTA1Q9NP79 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.85□□□□□ -1.31
VTA1Q9NP79 TMEM97P2-201ENST00000517841 403 ntBASIC6.85□□□□□ -1.31
VTA1Q9NP79 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC6.85□□□□□ -1.31
VTA1Q9NP79 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC6.85□□□□□ -1.31
VTA1Q9NP79 OR6M2P-201ENST00000529831 871 ntBASIC6.85□□□□□ -1.31
VTA1Q9NP79 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.85□□□□□ -1.31
VTA1Q9NP79 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.85□□□□□ -1.31
VTA1Q9NP79 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.85□□□□□ -1.31
VTA1Q9NP79 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.85□□□□□ -1.31
VTA1Q9NP79 AC023762.1-201ENST00000603280 584 ntBASIC6.85□□□□□ -1.31
VTA1Q9NP79 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC6.85□□□□□ -1.31
VTA1Q9NP79 AC021851.1-201ENST00000608537 1082 ntBASIC6.85□□□□□ -1.31
VTA1Q9NP79 AC004241.3-201ENST00000611728 517 ntBASIC6.85□□□□□ -1.31
VTA1Q9NP79 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
VTA1Q9NP79 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.85□□□□□ -1.31
VTA1Q9NP79 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.85□□□□□ -1.31
VTA1Q9NP79 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
VTA1Q9NP79 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
VTA1Q9NP79 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.85□□□□□ -1.31
VTA1Q9NP79 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.85□□□□□ -1.31
VTA1Q9NP79 AP001541.1-201ENST00000623322 1904 ntBASIC6.85□□□□□ -1.31
VTA1Q9NP79 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
VTA1Q9NP79 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
VTA1Q9NP79 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.85□□□□□ -1.31
VTA1Q9NP79 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
VTA1Q9NP79 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.85□□□□□ -1.31
VTA1Q9NP79 WDR95P-201ENST00000425638 1542 ntBASIC6.85□□□□□ -1.31
VTA1Q9NP79 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
VTA1Q9NP79 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
VTA1Q9NP79 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
VTA1Q9NP79 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.84□□□□□ -1.31
VTA1Q9NP79 TNPO1P2-201ENST00000426249 2665 ntBASIC6.84□□□□□ -1.31
VTA1Q9NP79 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
VTA1Q9NP79 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
VTA1Q9NP79 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
VTA1Q9NP79 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
VTA1Q9NP79 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
VTA1Q9NP79 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.84□□□□□ -1.31
VTA1Q9NP79 CIR1P2-201ENST00000514821 1342 ntBASIC6.84□□□□□ -1.31
VTA1Q9NP79 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC6.84□□□□□ -1.31
VTA1Q9NP79 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
VTA1Q9NP79 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC6.84□□□□□ -1.31
VTA1Q9NP79 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.84□□□□□ -1.31
VTA1Q9NP79 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
VTA1Q9NP79 RNA5SP242-201ENST00000364171 118 ntBASIC6.84□□□□□ -1.31
VTA1Q9NP79 ANAPC10P1-201ENST00000395991 556 ntBASIC6.84□□□□□ -1.31
VTA1Q9NP79 OR7E101P-201ENST00000400428 513 ntBASIC6.84□□□□□ -1.31
VTA1Q9NP79 HMGB3P19-201ENST00000403971 560 ntBASIC6.84□□□□□ -1.31
VTA1Q9NP79 MTCO2P8-201ENST00000412213 658 ntBASIC6.84□□□□□ -1.31
VTA1Q9NP79 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC6.84□□□□□ -1.31
VTA1Q9NP79 AL160175.1-201ENST00000428124 247 ntBASIC6.84□□□□□ -1.31
VTA1Q9NP79 BX119321.1-201ENST00000428912 797 ntBASIC6.84□□□□□ -1.31
VTA1Q9NP79 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.84□□□□□ -1.31
VTA1Q9NP79 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC6.84□□□□□ -1.31
VTA1Q9NP79 AC064862.4-201ENST00000442180 334 ntBASIC6.84□□□□□ -1.31
VTA1Q9NP79 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.84□□□□□ -1.31
VTA1Q9NP79 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
VTA1Q9NP79 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC6.84□□□□□ -1.31
VTA1Q9NP79 AC023141.9-201ENST00000458734 412 ntBASIC6.84□□□□□ -1.31
VTA1Q9NP79 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms