Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 BX323845.3-201ENST00000428215 527 ntBASIC5.89□□□□□ -1.47
PCDH9Q9HC56 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.89□□□□□ -1.47
PCDH9Q9HC56 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.89□□□□□ -1.47
PCDH9Q9HC56 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC5.89□□□□□ -1.47
PCDH9Q9HC56 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.89□□□□□ -1.47
PCDH9Q9HC56 AC108751.3-201ENST00000461814 1020 ntBASIC5.89□□□□□ -1.47
PCDH9Q9HC56 RPS23P2-201ENST00000463671 415 ntBASIC5.89□□□□□ -1.47
PCDH9Q9HC56 NDUFA5P5-201ENST00000468361 342 ntBASIC5.89□□□□□ -1.47
PCDH9Q9HC56 DUTP1-201ENST00000493631 470 ntBASIC5.89□□□□□ -1.47
PCDH9Q9HC56 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PCDH9Q9HC56 AC006499.4-201ENST00000510947 694 ntBASIC5.89□□□□□ -1.47
PCDH9Q9HC56 AC074255.1-201ENST00000511259 501 ntBASIC5.89□□□□□ -1.47
PCDH9Q9HC56 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.89□□□□□ -1.47
PCDH9Q9HC56 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC5.89□□□□□ -1.47
PCDH9Q9HC56 AP000648.1-201ENST00000529682 397 ntBASIC5.89□□□□□ -1.47
PCDH9Q9HC56 AL049874.4-201ENST00000557593 255 ntBASIC5.89□□□□□ -1.47
PCDH9Q9HC56 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.89□□□□□ -1.47
PCDH9Q9HC56 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.89□□□□□ -1.47
PCDH9Q9HC56 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
PCDH9Q9HC56 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.89□□□□□ -1.47
PCDH9Q9HC56 AC092121.1-201ENST00000569452 202 ntBASIC5.89□□□□□ -1.47
PCDH9Q9HC56 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.89□□□□□ -1.47
PCDH9Q9HC56 KATNBL1P1-201ENST00000605192 748 ntBASIC5.89□□□□□ -1.47
PCDH9Q9HC56 AL031601.1-201ENST00000605702 394 ntBASIC5.89□□□□□ -1.47
PCDH9Q9HC56 AL096712.1-201ENST00000614561 159 ntBASIC5.89□□□□□ -1.47
PCDH9Q9HC56 AC007786.3-201ENST00000615154 596 ntBASIC5.89□□□□□ -1.47
PCDH9Q9HC56 MIR6133-201ENST00000617057 108 ntBASIC5.89□□□□□ -1.47
PCDH9Q9HC56 HPVC1-201ENST00000629899 1198 ntBASIC5.89□□□□□ -1.47
PCDH9Q9HC56 AC129915.3-201ENST00000634128 948 ntBASIC5.89□□□□□ -1.47
PCDH9Q9HC56 AL163152.1-201ENST00000642001 374 ntBASIC5.89□□□□□ -1.47
PCDH9Q9HC56 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCDH9Q9HC56 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.89□□□□□ -1.47
PCDH9Q9HC56 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.89□□□□□ -1.47
PCDH9Q9HC56 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.89□□□□□ -1.47
PCDH9Q9HC56 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PCDH9Q9HC56 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCDH9Q9HC56 MTCO1P22-201ENST00000604619 1360 ntBASIC5.89□□□□□ -1.47
PCDH9Q9HC56 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.89□□□□□ -1.47
PCDH9Q9HC56 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.89□□□□□ -1.47
PCDH9Q9HC56 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.89□□□□□ -1.47
PCDH9Q9HC56 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCDH9Q9HC56 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
PCDH9Q9HC56 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PCDH9Q9HC56 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PCDH9Q9HC56 RNU6-891P-201ENST00000384280 111 ntBASIC5.88□□□□□ -1.47
PCDH9Q9HC56 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
PCDH9Q9HC56 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.88□□□□□ -1.47
PCDH9Q9HC56 CDY8P-201ENST00000428380 1279 ntBASIC5.88□□□□□ -1.47
PCDH9Q9HC56 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PCDH9Q9HC56 GAPDHP48-201ENST00000436626 961 ntBASIC5.88□□□□□ -1.47
PCDH9Q9HC56 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.88□□□□□ -1.47
PCDH9Q9HC56 CDY20P-201ENST00000447528 1279 ntBASIC5.88□□□□□ -1.47
PCDH9Q9HC56 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC5.88□□□□□ -1.47
PCDH9Q9HC56 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC5.88□□□□□ -1.47
PCDH9Q9HC56 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.88□□□□□ -1.47
PCDH9Q9HC56 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.88□□□□□ -1.47
PCDH9Q9HC56 RNA5SP271-201ENST00000516700 88 ntBASIC5.88□□□□□ -1.47
PCDH9Q9HC56 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC5.88□□□□□ -1.47
PCDH9Q9HC56 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PCDH9Q9HC56 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.88□□□□□ -1.47
PCDH9Q9HC56 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC5.88□□□□□ -1.47
PCDH9Q9HC56 AC135626.1-201ENST00000556983 435 ntBASIC5.88□□□□□ -1.47
PCDH9Q9HC56 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.88□□□□□ -1.47
PCDH9Q9HC56 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
PCDH9Q9HC56 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.88□□□□□ -1.47
PCDH9Q9HC56 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.88□□□□□ -1.47
PCDH9Q9HC56 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC5.88□□□□□ -1.47
PCDH9Q9HC56 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
PCDH9Q9HC56 DHFRP1-201ENST00000579682 559 ntBASIC5.88□□□□□ -1.47
PCDH9Q9HC56 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.88□□□□□ -1.47
PCDH9Q9HC56 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.88□□□□□ -1.47
PCDH9Q9HC56 MIR1910-201ENST00000636955 80 ntBASIC5.88□□□□□ -1.47
PCDH9Q9HC56 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PCDH9Q9HC56 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.88□□□□□ -1.47
PCDH9Q9HC56 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
PCDH9Q9HC56 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PCDH9Q9HC56 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PCDH9Q9HC56 AC083899.1-201ENST00000454465 3819 ntBASIC5.88□□□□□ -1.47
PCDH9Q9HC56 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
PCDH9Q9HC56 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PCDH9Q9HC56 ICE2P1-201ENST00000512800 1849 ntBASIC5.88□□□□□ -1.47
PCDH9Q9HC56 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PCDH9Q9HC56 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.87□□□□□ -1.47
PCDH9Q9HC56 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
PCDH9Q9HC56 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.87□□□□□ -1.47
PCDH9Q9HC56 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.87□□□□□ -1.47
PCDH9Q9HC56 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.87□□□□□ -1.47
PCDH9Q9HC56 AL161912.4-201ENST00000623889 2468 ntBASIC5.87□□□□□ -1.47
PCDH9Q9HC56 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.87□□□□□ -1.47
PCDH9Q9HC56 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.87□□□□□ -1.47
PCDH9Q9HC56 AL121886.1-201ENST00000358609 435 ntBASIC5.87□□□□□ -1.47
PCDH9Q9HC56 OOSP1-201ENST00000398992 1270 ntBASIC5.87□□□□□ -1.47
PCDH9Q9HC56 AC096921.1-201ENST00000411661 375 ntBASIC5.87□□□□□ -1.47
PCDH9Q9HC56 AL357752.1-201ENST00000412817 349 ntBASIC5.87□□□□□ -1.47
PCDH9Q9HC56 MRPL53P1-201ENST00000414323 319 ntBASIC5.87□□□□□ -1.47
PCDH9Q9HC56 RNF10P1-201ENST00000418589 369 ntBASIC5.87□□□□□ -1.47
PCDH9Q9HC56 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.87□□□□□ -1.47
PCDH9Q9HC56 AC009506.2-201ENST00000420635 840 ntBASIC5.87□□□□□ -1.47
PCDH9Q9HC56 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
PCDH9Q9HC56 LINC02210-201ENST00000444561 288 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms