Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
UPF3BQ9BZI7 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
UPF3BQ9BZI7 AL391361.1-201ENST00000405580 489 ntBASIC6.71□□□□□ -1.34
UPF3BQ9BZI7 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC6.71□□□□□ -1.34
UPF3BQ9BZI7 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC6.71□□□□□ -1.34
UPF3BQ9BZI7 RPS17P15-201ENST00000475609 349 ntBASIC6.71□□□□□ -1.34
UPF3BQ9BZI7 GLUD1P3-202ENST00000508551 200 ntBASIC6.71□□□□□ -1.34
UPF3BQ9BZI7 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.71□□□□□ -1.34
UPF3BQ9BZI7 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC6.71□□□□□ -1.34
UPF3BQ9BZI7 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC6.71□□□□□ -1.34
UPF3BQ9BZI7 AP006245.2-201ENST00000522004 300 ntBASIC6.71□□□□□ -1.34
UPF3BQ9BZI7 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.71□□□□□ -1.34
UPF3BQ9BZI7 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC6.71□□□□□ -1.34
UPF3BQ9BZI7 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.71□□□□□ -1.34
UPF3BQ9BZI7 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.71□□□□□ -1.34
UPF3BQ9BZI7 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.71□□□□□ -1.34
UPF3BQ9BZI7 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.71□□□□□ -1.34
UPF3BQ9BZI7 MIR4260-201ENST00000583107 67 ntBASIC6.71□□□□□ -1.34
UPF3BQ9BZI7 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
UPF3BQ9BZI7 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
UPF3BQ9BZI7 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
UPF3BQ9BZI7 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
UPF3BQ9BZI7 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
UPF3BQ9BZI7 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
UPF3BQ9BZI7 AC007938.2-201ENST00000604666 2634 ntBASIC6.71□□□□□ -1.34
UPF3BQ9BZI7 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
UPF3BQ9BZI7 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC6.71□□□□□ -1.34
UPF3BQ9BZI7 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
UPF3BQ9BZI7 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
UPF3BQ9BZI7 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.7□□□□□ -1.34
UPF3BQ9BZI7 AC083837.1-201ENST00000565297 2994 ntBASIC6.7□□□□□ -1.34
UPF3BQ9BZI7 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.7□□□□□ -1.34
UPF3BQ9BZI7 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.7□□□□□ -1.34
UPF3BQ9BZI7 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
UPF3BQ9BZI7 GAPDHP24-201ENST00000328713 983 ntBASIC6.7□□□□□ -1.34
UPF3BQ9BZI7 RNA5SP30-201ENST00000365552 115 ntBASIC6.7□□□□□ -1.34
UPF3BQ9BZI7 BPHL-201ENST00000380368 797 ntTSL 5 BASIC6.7□□□□□ -1.34
UPF3BQ9BZI7 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.7□□□□□ -1.34
UPF3BQ9BZI7 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
UPF3BQ9BZI7 RPSAP35-201ENST00000413753 818 ntBASIC6.7□□□□□ -1.34
UPF3BQ9BZI7 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.7□□□□□ -1.34
UPF3BQ9BZI7 AL158827.1-201ENST00000416300 391 ntBASIC6.7□□□□□ -1.34
UPF3BQ9BZI7 RPS27P18-201ENST00000431701 247 ntBASIC6.7□□□□□ -1.34
UPF3BQ9BZI7 TMEM183AP1-205ENST00000432739 290 ntBASIC6.7□□□□□ -1.34
UPF3BQ9BZI7 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.7□□□□□ -1.34
UPF3BQ9BZI7 AL512637.1-201ENST00000439523 1231 ntBASIC6.7□□□□□ -1.34
UPF3BQ9BZI7 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
UPF3BQ9BZI7 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
UPF3BQ9BZI7 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC6.7□□□□□ -1.34
UPF3BQ9BZI7 RPS23P6-201ENST00000466136 431 ntBASIC6.7□□□□□ -1.34
UPF3BQ9BZI7 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC6.7□□□□□ -1.34
UPF3BQ9BZI7 AC093815.1-201ENST00000508637 280 ntBASIC6.7□□□□□ -1.34
UPF3BQ9BZI7 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.7□□□□□ -1.34
UPF3BQ9BZI7 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.7□□□□□ -1.34
UPF3BQ9BZI7 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC6.7□□□□□ -1.34
UPF3BQ9BZI7 DPPA2P4-201ENST00000563717 878 ntBASIC6.7□□□□□ -1.34
UPF3BQ9BZI7 AC010547.6-201ENST00000571789 193 ntBASIC6.7□□□□□ -1.34
UPF3BQ9BZI7 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.7□□□□□ -1.34
UPF3BQ9BZI7 AC063977.5-201ENST00000601044 974 ntBASIC6.7□□□□□ -1.34
UPF3BQ9BZI7 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.7□□□□□ -1.34
UPF3BQ9BZI7 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
UPF3BQ9BZI7 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC6.7□□□□□ -1.34
UPF3BQ9BZI7 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.7□□□□□ -1.34
UPF3BQ9BZI7 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
UPF3BQ9BZI7 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC6.7□□□□□ -1.34
UPF3BQ9BZI7 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
UPF3BQ9BZI7 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
UPF3BQ9BZI7 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
UPF3BQ9BZI7 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC6.7□□□□□ -1.34
UPF3BQ9BZI7 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
UPF3BQ9BZI7 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
UPF3BQ9BZI7 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
UPF3BQ9BZI7 AC006206.1-201ENST00000544842 3387 ntBASIC6.69□□□□□ -1.34
UPF3BQ9BZI7 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
UPF3BQ9BZI7 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
UPF3BQ9BZI7 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.69□□□□□ -1.34
UPF3BQ9BZI7 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
UPF3BQ9BZI7 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
UPF3BQ9BZI7 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
UPF3BQ9BZI7 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
UPF3BQ9BZI7 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
UPF3BQ9BZI7 SNORA64.1-201ENST00000362600 132 ntBASIC6.69□□□□□ -1.34
UPF3BQ9BZI7 RN7SKP145-201ENST00000363291 303 ntBASIC6.69□□□□□ -1.34
UPF3BQ9BZI7 RN7SKP292-201ENST00000365522 317 ntBASIC6.69□□□□□ -1.34
UPF3BQ9BZI7 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
UPF3BQ9BZI7 AC127526.2-201ENST00000426436 775 ntBASIC6.69□□□□□ -1.34
UPF3BQ9BZI7 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.69□□□□□ -1.34
UPF3BQ9BZI7 RPL36AP39-201ENST00000445859 318 ntBASIC6.69□□□□□ -1.34
UPF3BQ9BZI7 REG1CP-206ENST00000447469 496 ntBASIC6.69□□□□□ -1.34
UPF3BQ9BZI7 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC6.69□□□□□ -1.34
UPF3BQ9BZI7 AC092593.2-201ENST00000513866 913 ntBASIC6.69□□□□□ -1.34
UPF3BQ9BZI7 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
UPF3BQ9BZI7 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.69□□□□□ -1.34
UPF3BQ9BZI7 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.69□□□□□ -1.34
UPF3BQ9BZI7 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.69□□□□□ -1.34
UPF3BQ9BZI7 AC122688.1-201ENST00000541494 223 ntBASIC6.69□□□□□ -1.34
UPF3BQ9BZI7 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.69□□□□□ -1.34
UPF3BQ9BZI7 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.69□□□□□ -1.34
UPF3BQ9BZI7 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC6.69□□□□□ -1.34
UPF3BQ9BZI7 AC015802.2-201ENST00000589690 189 ntBASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms