Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SCAPERQ9BY12 AP002991.2-201ENST00000623807 2801 ntBASIC8.32□□□□□ -1.08
SCAPERQ9BY12 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SCAPERQ9BY12 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SCAPERQ9BY12 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
SCAPERQ9BY12 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC8.32□□□□□ -1.08
SCAPERQ9BY12 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC8.32□□□□□ -1.08
SCAPERQ9BY12 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SCAPERQ9BY12 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC8.32□□□□□ -1.08
SCAPERQ9BY12 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SCAPERQ9BY12 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
SCAPERQ9BY12 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SCAPERQ9BY12 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
SCAPERQ9BY12 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC8.31□□□□□ -1.08
SCAPERQ9BY12 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
SCAPERQ9BY12 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC8.31□□□□□ -1.08
SCAPERQ9BY12 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC8.31□□□□□ -1.08
SCAPERQ9BY12 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
SCAPERQ9BY12 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
SCAPERQ9BY12 AC211486.3-201ENST00000412694 621 ntBASIC8.31□□□□□ -1.08
SCAPERQ9BY12 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC8.31□□□□□ -1.08
SCAPERQ9BY12 TRY2P-201ENST00000448860 689 ntBASIC8.31□□□□□ -1.08
SCAPERQ9BY12 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC8.31□□□□□ -1.08
SCAPERQ9BY12 RPL37AP8-201ENST00000494116 276 ntBASIC8.31□□□□□ -1.08
SCAPERQ9BY12 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC8.31□□□□□ -1.08
SCAPERQ9BY12 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC8.31□□□□□ -1.08
SCAPERQ9BY12 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC8.31□□□□□ -1.08
SCAPERQ9BY12 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC8.31□□□□□ -1.08
SCAPERQ9BY12 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC8.31□□□□□ -1.08
SCAPERQ9BY12 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC8.31□□□□□ -1.08
SCAPERQ9BY12 AC005084.1-201ENST00000605160 304 ntBASIC8.31□□□□□ -1.08
SCAPERQ9BY12 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC8.31□□□□□ -1.08
SCAPERQ9BY12 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SCAPERQ9BY12 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
SCAPERQ9BY12 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC8.31□□□□□ -1.08
SCAPERQ9BY12 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SCAPERQ9BY12 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
SCAPERQ9BY12 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
SCAPERQ9BY12 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
SCAPERQ9BY12 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC8.31□□□□□ -1.08
SCAPERQ9BY12 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SCAPERQ9BY12 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC8.3□□□□□ -1.08
SCAPERQ9BY12 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC8.3□□□□□ -1.08
SCAPERQ9BY12 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
SCAPERQ9BY12 RNA5SP487-201ENST00000410186 122 ntBASIC8.3□□□□□ -1.08
SCAPERQ9BY12 USP9YP9-201ENST00000429406 715 ntBASIC8.3□□□□□ -1.08
SCAPERQ9BY12 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC8.3□□□□□ -1.08
SCAPERQ9BY12 GSTM5P1-201ENST00000434751 660 ntBASIC8.3□□□□□ -1.08
SCAPERQ9BY12 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC8.3□□□□□ -1.08
SCAPERQ9BY12 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC8.3□□□□□ -1.08
SCAPERQ9BY12 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC8.3□□□□□ -1.08
SCAPERQ9BY12 MRPS21P9-201ENST00000571150 257 ntBASIC8.3□□□□□ -1.08
SCAPERQ9BY12 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC8.3□□□□□ -1.08
SCAPERQ9BY12 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC8.3□□□□□ -1.08
SCAPERQ9BY12 AC234771.5-201ENST00000600161 514 ntBASIC8.3□□□□□ -1.08
SCAPERQ9BY12 AC008745.1-201ENST00000604064 271 ntBASIC8.3□□□□□ -1.08
SCAPERQ9BY12 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
SCAPERQ9BY12 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC8.3□□□□□ -1.08
SCAPERQ9BY12 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
SCAPERQ9BY12 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC8.3□□□□□ -1.08
SCAPERQ9BY12 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC8.3□□□□□ -1.08
SCAPERQ9BY12 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
SCAPERQ9BY12 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
SCAPERQ9BY12 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
SCAPERQ9BY12 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
SCAPERQ9BY12 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
SCAPERQ9BY12 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SCAPERQ9BY12 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
SCAPERQ9BY12 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SCAPERQ9BY12 AC073648.4-201ENST00000442655 781 ntBASIC8.29□□□□□ -1.08
SCAPERQ9BY12 AL672138.1-201ENST00000450604 1015 ntBASIC8.29□□□□□ -1.08
SCAPERQ9BY12 RPL5P22-201ENST00000480199 884 ntBASIC8.29□□□□□ -1.08
SCAPERQ9BY12 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC8.29□□□□□ -1.08
SCAPERQ9BY12 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC8.29□□□□□ -1.08
SCAPERQ9BY12 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC8.29□□□□□ -1.08
SCAPERQ9BY12 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC8.29□□□□□ -1.08
SCAPERQ9BY12 AC060766.1-201ENST00000590824 627 ntBASIC8.29□□□□□ -1.08
SCAPERQ9BY12 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC8.29□□□□□ -1.08
SCAPERQ9BY12 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
SCAPERQ9BY12 AC074101.1-201ENST00000637861 241 ntBASIC8.29□□□□□ -1.08
SCAPERQ9BY12 MAPK10-350ENST00000641777 965 ntBASIC8.29□□□□□ -1.08
SCAPERQ9BY12 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SCAPERQ9BY12 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
SCAPERQ9BY12 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SCAPERQ9BY12 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SCAPERQ9BY12 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC8.29□□□□□ -1.08
SCAPERQ9BY12 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SCAPERQ9BY12 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SCAPERQ9BY12 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC8.29□□□□□ -1.08
SCAPERQ9BY12 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SCAPERQ9BY12 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
SCAPERQ9BY12 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC8.29□□□□□ -1.08
SCAPERQ9BY12 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SCAPERQ9BY12 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
SCAPERQ9BY12 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SCAPERQ9BY12 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SCAPERQ9BY12 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
SCAPERQ9BY12 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
SCAPERQ9BY12 GNAS-202ENST00000306090 477 ntTSL 5 BASIC8.29□□□□□ -1.08
SCAPERQ9BY12 SNURFL-201ENST00000309296 343 ntBASIC8.29□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms