Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 AL359715.3-201ENST00000569267 2123 ntBASIC4.57□□□□□ -1.68
GAFA1Q96PS6 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
GAFA1Q96PS6 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC4.57□□□□□ -1.68
GAFA1Q96PS6 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC4.56□□□□□ -1.68
GAFA1Q96PS6 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC4.56□□□□□ -1.68
GAFA1Q96PS6 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
GAFA1Q96PS6 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
GAFA1Q96PS6 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
GAFA1Q96PS6 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
GAFA1Q96PS6 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC4.56□□□□□ -1.68
GAFA1Q96PS6 AC027279.1-201ENST00000568885 4284 ntBASIC4.56□□□□□ -1.68
GAFA1Q96PS6 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC4.56□□□□□ -1.68
GAFA1Q96PS6 MIR323A-201ENST00000362199 86 ntBASIC4.56□□□□□ -1.68
GAFA1Q96PS6 RNA5SP453-201ENST00000362503 119 ntBASIC4.56□□□□□ -1.68
GAFA1Q96PS6 RNA5SP319-201ENST00000362768 119 ntBASIC4.56□□□□□ -1.68
GAFA1Q96PS6 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC4.56□□□□□ -1.68
GAFA1Q96PS6 SNORA16A-201ENST00000384342 137 ntBASIC4.56□□□□□ -1.68
GAFA1Q96PS6 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC4.56□□□□□ -1.68
GAFA1Q96PS6 AL133482.1-201ENST00000415988 498 ntBASIC4.56□□□□□ -1.68
GAFA1Q96PS6 AL158827.1-201ENST00000416300 391 ntBASIC4.56□□□□□ -1.68
GAFA1Q96PS6 AL513325.1-201ENST00000417716 1034 ntBASIC4.56□□□□□ -1.68
GAFA1Q96PS6 BX276092.6-201ENST00000430476 250 ntBASIC4.56□□□□□ -1.68
GAFA1Q96PS6 NDUFB4P8-201ENST00000435351 367 ntBASIC4.56□□□□□ -1.68
GAFA1Q96PS6 AL359265.1-201ENST00000440296 795 ntBASIC4.56□□□□□ -1.68
GAFA1Q96PS6 AC023271.1-201ENST00000445936 1090 ntBASIC4.56□□□□□ -1.68
GAFA1Q96PS6 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.56□□□□□ -1.68
GAFA1Q96PS6 AC016724.1-201ENST00000453215 421 ntBASIC4.56□□□□□ -1.68
GAFA1Q96PS6 BX276092.8-201ENST00000455722 250 ntBASIC4.56□□□□□ -1.68
GAFA1Q96PS6 RN7SL197P-201ENST00000466981 299 ntBASIC4.56□□□□□ -1.68
GAFA1Q96PS6 RN7SL51P-201ENST00000468230 285 ntBASIC4.56□□□□□ -1.68
GAFA1Q96PS6 RPL35AP19-201ENST00000469425 329 ntBASIC4.56□□□□□ -1.68
GAFA1Q96PS6 AC100832.1-201ENST00000471945 383 ntBASIC4.56□□□□□ -1.68
GAFA1Q96PS6 RN7SL174P-201ENST00000475578 289 ntBASIC4.56□□□□□ -1.68
GAFA1Q96PS6 AC090638.1-201ENST00000498296 909 ntBASIC4.56□□□□□ -1.68
GAFA1Q96PS6 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.56□□□□□ -1.68
GAFA1Q96PS6 AC091912.1-201ENST00000511351 248 ntBASIC4.56□□□□□ -1.68
GAFA1Q96PS6 RNA5SP362-201ENST00000516048 118 ntBASIC4.56□□□□□ -1.68
GAFA1Q96PS6 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.56□□□□□ -1.68
GAFA1Q96PS6 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.56□□□□□ -1.68
GAFA1Q96PS6 AC078878.1-201ENST00000539832 958 ntBASIC4.56□□□□□ -1.68
GAFA1Q96PS6 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC4.56□□□□□ -1.68
GAFA1Q96PS6 AC012146.2-201ENST00000576545 416 ntBASIC4.56□□□□□ -1.68
GAFA1Q96PS6 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC4.56□□□□□ -1.68
GAFA1Q96PS6 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC4.56□□□□□ -1.68
GAFA1Q96PS6 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC4.56□□□□□ -1.68
GAFA1Q96PS6 AP000769.2-201ENST00000602344 396 ntBASIC4.56□□□□□ -1.68
GAFA1Q96PS6 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.56□□□□□ -1.68
GAFA1Q96PS6 AL589674.2-201ENST00000604304 337 ntBASIC4.56□□□□□ -1.68
GAFA1Q96PS6 MIR6133-201ENST00000617057 108 ntBASIC4.56□□□□□ -1.68
GAFA1Q96PS6 AC021766.1-201ENST00000624404 741 ntBASIC4.56□□□□□ -1.68
GAFA1Q96PS6 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC4.56□□□□□ -1.68
GAFA1Q96PS6 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
GAFA1Q96PS6 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC4.56□□□□□ -1.68
GAFA1Q96PS6 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
GAFA1Q96PS6 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
GAFA1Q96PS6 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC4.56□□□□□ -1.68
GAFA1Q96PS6 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
GAFA1Q96PS6 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC4.56□□□□□ -1.68
GAFA1Q96PS6 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
GAFA1Q96PS6 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
GAFA1Q96PS6 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
GAFA1Q96PS6 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
GAFA1Q96PS6 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.55□□□□□ -1.68
GAFA1Q96PS6 AC089998.1-201ENST00000548575 3141 ntBASIC4.55□□□□□ -1.68
GAFA1Q96PS6 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
GAFA1Q96PS6 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
GAFA1Q96PS6 RNA5SP435-201ENST00000364044 108 ntBASIC4.55□□□□□ -1.68
GAFA1Q96PS6 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
GAFA1Q96PS6 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.55□□□□□ -1.68
GAFA1Q96PS6 SNORA70.6-201ENST00000383934 134 ntBASIC4.55□□□□□ -1.68
GAFA1Q96PS6 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
GAFA1Q96PS6 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.55□□□□□ -1.68
GAFA1Q96PS6 CHEK2P5-201ENST00000423877 246 ntBASIC4.55□□□□□ -1.68
GAFA1Q96PS6 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.55□□□□□ -1.68
GAFA1Q96PS6 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.55□□□□□ -1.68
GAFA1Q96PS6 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.55□□□□□ -1.68
GAFA1Q96PS6 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.55□□□□□ -1.68
GAFA1Q96PS6 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
GAFA1Q96PS6 EIF1P7-201ENST00000487533 337 ntBASIC4.55□□□□□ -1.68
GAFA1Q96PS6 RN7SL101P-201ENST00000496350 279 ntBASIC4.55□□□□□ -1.68
GAFA1Q96PS6 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC4.55□□□□□ -1.68
GAFA1Q96PS6 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC4.55□□□□□ -1.68
GAFA1Q96PS6 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
GAFA1Q96PS6 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.55□□□□□ -1.68
GAFA1Q96PS6 AC109464.1-201ENST00000511091 819 ntBASIC4.55□□□□□ -1.68
GAFA1Q96PS6 SCARNA16.4-201ENST00000516956 187 ntBASIC4.55□□□□□ -1.68
GAFA1Q96PS6 AP003080.1-202ENST00000526526 915 ntBASIC4.55□□□□□ -1.68
GAFA1Q96PS6 AC079064.1-201ENST00000528365 362 ntBASIC4.55□□□□□ -1.68
GAFA1Q96PS6 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC4.55□□□□□ -1.68
GAFA1Q96PS6 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
GAFA1Q96PS6 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
GAFA1Q96PS6 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC4.55□□□□□ -1.68
GAFA1Q96PS6 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
GAFA1Q96PS6 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
GAFA1Q96PS6 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC4.55□□□□□ -1.68
GAFA1Q96PS6 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC4.55□□□□□ -1.68
GAFA1Q96PS6 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.55□□□□□ -1.68
GAFA1Q96PS6 AC010245.2-201ENST00000606908 1167 ntBASIC4.55□□□□□ -1.68
GAFA1Q96PS6 MIR8080-201ENST00000622224 89 ntBASIC4.55□□□□□ -1.68
GAFA1Q96PS6 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms