Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.74□□□□□ -1.49
SHROOM3Q8TF72 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.74□□□□□ -1.49
SHROOM3Q8TF72 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.74□□□□□ -1.49
SHROOM3Q8TF72 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.74□□□□□ -1.49
SHROOM3Q8TF72 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.74□□□□□ -1.49
SHROOM3Q8TF72 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SHROOM3Q8TF72 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
SHROOM3Q8TF72 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.73□□□□□ -1.49
SHROOM3Q8TF72 AC235565.1-201ENST00000456962 1325 ntBASIC5.73□□□□□ -1.49
SHROOM3Q8TF72 U3.2-201ENST00000362981 210 ntBASIC5.73□□□□□ -1.49
SHROOM3Q8TF72 RN7SKP145-201ENST00000363291 303 ntBASIC5.73□□□□□ -1.49
SHROOM3Q8TF72 MIR550A3-201ENST00000390735 95 ntBASIC5.73□□□□□ -1.49
SHROOM3Q8TF72 AL158827.1-201ENST00000416300 391 ntBASIC5.73□□□□□ -1.49
SHROOM3Q8TF72 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC5.73□□□□□ -1.49
SHROOM3Q8TF72 AL662874.1-201ENST00000426065 230 ntBASIC5.73□□□□□ -1.49
SHROOM3Q8TF72 AC005033.1-201ENST00000428904 813 ntBASIC5.73□□□□□ -1.49
SHROOM3Q8TF72 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.73□□□□□ -1.49
SHROOM3Q8TF72 AC108161.1-201ENST00000461060 402 ntBASIC5.73□□□□□ -1.49
SHROOM3Q8TF72 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.73□□□□□ -1.49
SHROOM3Q8TF72 AC022215.1-201ENST00000481770 362 ntBASIC5.73□□□□□ -1.49
SHROOM3Q8TF72 AC008953.1-201ENST00000497334 318 ntBASIC5.73□□□□□ -1.49
SHROOM3Q8TF72 RNA5SP228-201ENST00000516232 133 ntBASIC5.73□□□□□ -1.49
SHROOM3Q8TF72 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.73□□□□□ -1.49
SHROOM3Q8TF72 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.73□□□□□ -1.49
SHROOM3Q8TF72 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC5.73□□□□□ -1.49
SHROOM3Q8TF72 AL513327.3-201ENST00000602618 469 ntBASIC5.73□□□□□ -1.49
SHROOM3Q8TF72 FO393422.1-201ENST00000603908 708 ntBASIC5.73□□□□□ -1.49
SHROOM3Q8TF72 AL118522.2-201ENST00000616045 615 ntBASIC5.73□□□□□ -1.49
SHROOM3Q8TF72 LINC01963-201ENST00000562038 3148 ntBASIC5.73□□□□□ -1.49
SHROOM3Q8TF72 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
SHROOM3Q8TF72 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SHROOM3Q8TF72 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SHROOM3Q8TF72 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.73□□□□□ -1.49
SHROOM3Q8TF72 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.73□□□□□ -1.49
SHROOM3Q8TF72 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
SHROOM3Q8TF72 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC5.73□□□□□ -1.49
SHROOM3Q8TF72 AC109481.1-201ENST00000509173 282 ntBASIC5.73□□□□□ -1.49
SHROOM3Q8TF72 OR51A1P-201ENST00000511110 946 ntBASIC5.73□□□□□ -1.49
SHROOM3Q8TF72 AC136777.2-201ENST00000522979 358 ntBASIC5.73□□□□□ -1.49
SHROOM3Q8TF72 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.73□□□□□ -1.49
SHROOM3Q8TF72 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.73□□□□□ -1.49
SHROOM3Q8TF72 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.73□□□□□ -1.49
SHROOM3Q8TF72 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SHROOM3Q8TF72 AC100827.5-201ENST00000615883 426 ntBASIC5.73□□□□□ -1.49
SHROOM3Q8TF72 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.73□□□□□ -1.49
SHROOM3Q8TF72 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SHROOM3Q8TF72 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
SHROOM3Q8TF72 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SHROOM3Q8TF72 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SHROOM3Q8TF72 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
SHROOM3Q8TF72 AL158152.1-201ENST00000602652 1435 ntBASIC5.72□□□□□ -1.49
SHROOM3Q8TF72 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.72□□□□□ -1.49
SHROOM3Q8TF72 CASC19-248ENST00000641674 1356 ntBASIC5.72□□□□□ -1.49
SHROOM3Q8TF72 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SHROOM3Q8TF72 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.72□□□□□ -1.49
SHROOM3Q8TF72 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.72□□□□□ -1.49
SHROOM3Q8TF72 AL049634.1-201ENST00000453770 1720 ntBASIC5.72□□□□□ -1.49
SHROOM3Q8TF72 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SHROOM3Q8TF72 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
SHROOM3Q8TF72 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
SHROOM3Q8TF72 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.72□□□□□ -1.49
SHROOM3Q8TF72 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.72□□□□□ -1.49
SHROOM3Q8TF72 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SHROOM3Q8TF72 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
SHROOM3Q8TF72 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.72□□□□□ -1.49
SHROOM3Q8TF72 RN7SL222P-201ENST00000476452 299 ntBASIC5.72□□□□□ -1.49
SHROOM3Q8TF72 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SHROOM3Q8TF72 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.72□□□□□ -1.49
SHROOM3Q8TF72 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.72□□□□□ -1.49
SHROOM3Q8TF72 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.72□□□□□ -1.49
SHROOM3Q8TF72 HMGN2P6-201ENST00000551091 273 ntBASIC5.72□□□□□ -1.49
SHROOM3Q8TF72 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.72□□□□□ -1.49
SHROOM3Q8TF72 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.72□□□□□ -1.49
SHROOM3Q8TF72 AC000095.2-202ENST00000637415 154 ntBASIC5.72□□□□□ -1.49
SHROOM3Q8TF72 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.72□□□□□ -1.49
SHROOM3Q8TF72 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
SHROOM3Q8TF72 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
SHROOM3Q8TF72 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SHROOM3Q8TF72 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SHROOM3Q8TF72 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SHROOM3Q8TF72 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
SHROOM3Q8TF72 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.49
SHROOM3Q8TF72 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
SHROOM3Q8TF72 AC010168.2-201ENST00000562691 5428 ntBASIC5.71□□□□□ -1.49
SHROOM3Q8TF72 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
SHROOM3Q8TF72 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
SHROOM3Q8TF72 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.71□□□□□ -1.49
SHROOM3Q8TF72 MIR141-201ENST00000384975 95 ntBASIC5.71□□□□□ -1.49
SHROOM3Q8TF72 RNU11-201ENST00000387069 134 ntBASIC5.71□□□□□ -1.49
SHROOM3Q8TF72 RAB28P1-201ENST00000411517 641 ntBASIC5.71□□□□□ -1.49
SHROOM3Q8TF72 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.71□□□□□ -1.49
SHROOM3Q8TF72 RPA2P2-201ENST00000419698 796 ntBASIC5.71□□□□□ -1.49
SHROOM3Q8TF72 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.71□□□□□ -1.49
SHROOM3Q8TF72 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.71□□□□□ -1.49
SHROOM3Q8TF72 HMGB1P32-201ENST00000425971 565 ntBASIC5.71□□□□□ -1.49
SHROOM3Q8TF72 EIF2S2P3-201ENST00000428356 999 ntBASIC5.71□□□□□ -1.49
SHROOM3Q8TF72 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.71□□□□□ -1.49
SHROOM3Q8TF72 OR6D1P-201ENST00000436165 939 ntBASIC5.71□□□□□ -1.49
SHROOM3Q8TF72 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.71□□□□□ -1.49
SHROOM3Q8TF72 Z84478.1-201ENST00000438230 1219 ntBASIC5.71□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms