Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 ARHGEF7-208ENST00000426073 4921 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
NPAS3Q8IXF0 CTH-202ENST00000370938 1805 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
NPAS3Q8IXF0 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
NPAS3Q8IXF0 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC7.7□□□□□ -1.18
NPAS3Q8IXF0 TEFM-204ENST00000580840 2109 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
NPAS3Q8IXF0 PABPC1P9-201ENST00000426076 1612 ntBASIC7.7□□□□□ -1.18
NPAS3Q8IXF0 HBP1-208ENST00000468410 2704 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
NPAS3Q8IXF0 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
NPAS3Q8IXF0 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
NPAS3Q8IXF0 ZNF845-202ENST00000595091 4413 ntAPPRIS P1 TSL 4 BASIC7.7□□□□□ -1.18
NPAS3Q8IXF0 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
NPAS3Q8IXF0 LINC02208-201ENST00000506769 2803 ntTSL 5 BASIC7.7□□□□□ -1.18
NPAS3Q8IXF0 LOXHD1-201ENST00000300591 3970 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
NPAS3Q8IXF0 OR11G2-202ENST00000641682 3786 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
NPAS3Q8IXF0 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC7.69□□□□□ -1.18
NPAS3Q8IXF0 BDNF-213ENST00000525950 3829 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
NPAS3Q8IXF0 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
NPAS3Q8IXF0 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
NPAS3Q8IXF0 AL391261.1-201ENST00000555712 1479 ntBASIC7.69□□□□□ -1.18
NPAS3Q8IXF0 SOX6-211ENST00000528429 2656 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
NPAS3Q8IXF0 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
NPAS3Q8IXF0 AL512634.1-201ENST00000566873 2432 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
NPAS3Q8IXF0 KLHL32-202ENST00000369261 3698 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
NPAS3Q8IXF0 NBR1-201ENST00000341165 4656 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
NPAS3Q8IXF0 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
NPAS3Q8IXF0 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC7.69□□□□□ -1.18
NPAS3Q8IXF0 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
NPAS3Q8IXF0 RNU5F-7P-201ENST00000363696 115 ntBASIC7.69□□□□□ -1.18
NPAS3Q8IXF0 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
NPAS3Q8IXF0 RPS3AP9-201ENST00000417027 792 ntBASIC7.69□□□□□ -1.18
NPAS3Q8IXF0 AC093084.1-201ENST00000424233 687 ntBASIC7.69□□□□□ -1.18
NPAS3Q8IXF0 AC005040.1-201ENST00000437783 482 ntBASIC7.69□□□□□ -1.18
NPAS3Q8IXF0 ACTR3P2-201ENST00000439585 1257 ntBASIC7.69□□□□□ -1.18
NPAS3Q8IXF0 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
NPAS3Q8IXF0 AC126615.1-201ENST00000470084 630 ntBASIC7.69□□□□□ -1.18
NPAS3Q8IXF0 RPL7P24-201ENST00000493052 752 ntBASIC7.69□□□□□ -1.18
NPAS3Q8IXF0 RPL41-202ENST00000501597 469 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
NPAS3Q8IXF0 TECRP2-201ENST00000503270 928 ntBASIC7.69□□□□□ -1.18
NPAS3Q8IXF0 AC008629.2-201ENST00000503783 483 ntBASIC7.69□□□□□ -1.18
NPAS3Q8IXF0 AC010587.2-201ENST00000511727 448 ntBASIC7.69□□□□□ -1.18
NPAS3Q8IXF0 RAD21-204ENST00000518055 896 ntTSL 2 BASIC7.69□□□□□ -1.18
NPAS3Q8IXF0 OR7E161P-201ENST00000533722 967 ntBASIC7.69□□□□□ -1.18
NPAS3Q8IXF0 ELOCP31-201ENST00000540463 467 ntBASIC7.69□□□□□ -1.18
NPAS3Q8IXF0 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC7.69□□□□□ -1.18
NPAS3Q8IXF0 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC7.69□□□□□ -1.18
NPAS3Q8IXF0 DPPA3P2-202ENST00000557188 1219 ntBASIC7.69□□□□□ -1.18
NPAS3Q8IXF0 HMGB1P33-201ENST00000563485 527 ntBASIC7.69□□□□□ -1.18
NPAS3Q8IXF0 AC037471.2-201ENST00000564941 598 ntBASIC7.69□□□□□ -1.18
NPAS3Q8IXF0 RPS7P1-201ENST00000571702 585 ntBASIC7.69□□□□□ -1.18
NPAS3Q8IXF0 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC7.69□□□□□ -1.18
NPAS3Q8IXF0 OR7A8P-201ENST00000595427 913 ntBASIC7.69□□□□□ -1.18
NPAS3Q8IXF0 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC7.69□□□□□ -1.18
NPAS3Q8IXF0 NUTF2P8-201ENST00000604593 363 ntBASIC7.69□□□□□ -1.18
NPAS3Q8IXF0 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC7.69□□□□□ -1.18
NPAS3Q8IXF0 Z95327.3-201ENST00000610385 572 ntBASIC7.69□□□□□ -1.18
NPAS3Q8IXF0 CACNB2-213ENST00000612134 3825 ntTSL 5 BASIC7.69□□□□□ -1.18
NPAS3Q8IXF0 AC087588.2-201ENST00000617667 426 ntBASIC7.69□□□□□ -1.18
NPAS3Q8IXF0 AL359880.1-201ENST00000621879 266 ntBASIC7.69□□□□□ -1.18
NPAS3Q8IXF0 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC7.69□□□□□ -1.18
NPAS3Q8IXF0 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC7.69□□□□□ -1.18
NPAS3Q8IXF0 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
NPAS3Q8IXF0 AL008638.3-201ENST00000623027 5182 ntBASIC7.69□□□□□ -1.18
NPAS3Q8IXF0 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
NPAS3Q8IXF0 PRSS51-203ENST00000636217 2255 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
NPAS3Q8IXF0 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC7.69□□□□□ -1.18
NPAS3Q8IXF0 AC124045.1-201ENST00000606008 1953 ntBASIC7.69□□□□□ -1.18
NPAS3Q8IXF0 AMPD3-204ENST00000444303 3994 ntTSL 2 BASIC7.69□□□□□ -1.18
NPAS3Q8IXF0 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
NPAS3Q8IXF0 AL132640.2-201ENST00000559968 1698 ntBASIC7.69□□□□□ -1.18
NPAS3Q8IXF0 AOAH-210ENST00000617267 2398 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
NPAS3Q8IXF0 HSPA8P17-201ENST00000427029 1382 ntBASIC7.69□□□□□ -1.18
NPAS3Q8IXF0 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
NPAS3Q8IXF0 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
NPAS3Q8IXF0 NEMP1-201ENST00000300128 5590 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
NPAS3Q8IXF0 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
NPAS3Q8IXF0 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 SERPINA11-201ENST00000334708 1476 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 DTNA-205ENST00000399113 2232 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 SPARC-201ENST00000231061 3701 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 LUZP1-202ENST00000314174 3715 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 AL353743.4-201ENST00000422653 1547 ntBASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 AL353622.1-201ENST00000604716 1945 ntBASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 ZNF667-202ENST00000504904 4390 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 AC022150.4-201ENST00000598322 2848 ntBASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 AC026464.2-201ENST00000567834 2421 ntBASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 ERG-208ENST00000417133 5023 ntAPPRIS ALT1 TSL 2 BASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 SLC4A4-203ENST00000351898 3771 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 MFSD6-201ENST00000281416 4608 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 AC036108.4-201ENST00000611654 2516 ntBASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 OR4K15-201ENST00000305051 1216 ntBASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 RNU1-87P-201ENST00000363727 170 ntBASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 SNORA33.2-201ENST00000365413 134 ntBASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 SNORA4.3-201ENST00000365564 137 ntBASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
NPAS3Q8IXF0 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 293.1 ms