Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 MIR1275-201ENST00000408770 80 ntBASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 RNU6-757P-201ENST00000410334 100 ntBASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 MRPS36P1-201ENST00000421291 307 ntBASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 DLGAP5P1-201ENST00000430307 464 ntBASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 RPL21P110-201ENST00000433345 446 ntBASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 ARAFP2-201ENST00000440565 559 ntBASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 TPTE2P6-202ENST00000445572 1007 ntBASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 AC097359.1-201ENST00000447946 463 ntBASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 VNN3-210ENST00000450865 596 ntTSL 4 BASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 RPS27AP8-201ENST00000452665 445 ntBASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 MEF2AP1-201ENST00000454867 863 ntBASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 RPL7P18-201ENST00000478965 734 ntBASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 VPS26AP1-201ENST00000483197 979 ntBASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 AC106822.1-201ENST00000502647 526 ntBASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 CCDC11P1-201ENST00000503137 1162 ntBASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 AC140063.1-201ENST00000541343 259 ntBASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 HIGD1AP17-201ENST00000554576 276 ntBASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 AC006530.1-201ENST00000555980 571 ntBASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 AC023827.2-201ENST00000566880 1061 ntBASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 AC022884.3-201ENST00000579571 248 ntBASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 RN7SL230P-201ENST00000580835 303 ntBASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 AL031985.2-201ENST00000600955 480 ntBASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 AL359715.5-201ENST00000623431 443 ntBASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 AF246928.1-201ENST00000623768 87 ntBASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 AC106872.5-201ENST00000508856 1416 ntBASIC7.4□□□□□ -1.22
NPAS4Q8IUM7 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC7.4□□□□□ -1.23
NPAS4Q8IUM7 TOM1L1-220ENST00000575333 1849 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
NPAS4Q8IUM7 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.23
NPAS4Q8IUM7 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC7.4□□□□□ -1.23
NPAS4Q8IUM7 AC006213.1-202ENST00000589021 2176 ntTSL 2 BASIC7.4□□□□□ -1.23
NPAS4Q8IUM7 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
NPAS4Q8IUM7 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.23
NPAS4Q8IUM7 AP002364.1-201ENST00000623330 3386 ntBASIC7.4□□□□□ -1.23
NPAS4Q8IUM7 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC7.4□□□□□ -1.23
NPAS4Q8IUM7 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
NPAS4Q8IUM7 AC012213.2-201ENST00000562917 4597 ntBASIC7.39□□□□□ -1.23
NPAS4Q8IUM7 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC7.39□□□□□ -1.23
NPAS4Q8IUM7 SKA2-201ENST00000330137 2798 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
NPAS4Q8IUM7 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
NPAS4Q8IUM7 AC008676.2-202ENST00000509655 1992 ntTSL 2 BASIC7.39□□□□□ -1.23
NPAS4Q8IUM7 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
NPAS4Q8IUM7 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
NPAS4Q8IUM7 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC7.39□□□□□ -1.23
NPAS4Q8IUM7 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
NPAS4Q8IUM7 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC7.39□□□□□ -1.23
NPAS4Q8IUM7 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
NPAS4Q8IUM7 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC7.39□□□□□ -1.23
NPAS4Q8IUM7 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC7.39□□□□□ -1.23
NPAS4Q8IUM7 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
NPAS4Q8IUM7 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC7.39□□□□□ -1.23
NPAS4Q8IUM7 GSTA8P-201ENST00000404253 637 ntBASIC7.39□□□□□ -1.23
NPAS4Q8IUM7 AL021407.1-201ENST00000404531 386 ntBASIC7.39□□□□□ -1.23
NPAS4Q8IUM7 RPL12P23-201ENST00000405880 490 ntBASIC7.39□□□□□ -1.23
NPAS4Q8IUM7 NRBF2P2-201ENST00000413087 861 ntBASIC7.39□□□□□ -1.23
NPAS4Q8IUM7 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC7.39□□□□□ -1.23
NPAS4Q8IUM7 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC7.39□□□□□ -1.23
NPAS4Q8IUM7 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC7.39□□□□□ -1.23
NPAS4Q8IUM7 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC7.39□□□□□ -1.23
NPAS4Q8IUM7 NMNAT1P2-201ENST00000435192 860 ntBASIC7.39□□□□□ -1.23
NPAS4Q8IUM7 AL645939.3-201ENST00000435408 225 ntBASIC7.39□□□□□ -1.23
NPAS4Q8IUM7 HMGB1P45-201ENST00000435986 653 ntBASIC7.39□□□□□ -1.23
NPAS4Q8IUM7 CYCSP11-201ENST00000436426 315 ntBASIC7.39□□□□□ -1.23
NPAS4Q8IUM7 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC7.39□□□□□ -1.23
NPAS4Q8IUM7 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC7.39□□□□□ -1.23
NPAS4Q8IUM7 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC7.39□□□□□ -1.23
NPAS4Q8IUM7 RPL5P10-201ENST00000445207 894 ntBASIC7.39□□□□□ -1.23
NPAS4Q8IUM7 RPL23AP28-201ENST00000448062 470 ntBASIC7.39□□□□□ -1.23
NPAS4Q8IUM7 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
NPAS4Q8IUM7 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC7.39□□□□□ -1.23
NPAS4Q8IUM7 AC104339.1-201ENST00000465478 348 ntBASIC7.39□□□□□ -1.23
NPAS4Q8IUM7 AC096741.1-201ENST00000472250 846 ntBASIC7.39□□□□□ -1.23
NPAS4Q8IUM7 RN7SL413P-201ENST00000482700 297 ntBASIC7.39□□□□□ -1.23
NPAS4Q8IUM7 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC7.39□□□□□ -1.23
NPAS4Q8IUM7 OR7E157P-201ENST00000494376 911 ntBASIC7.39□□□□□ -1.23
NPAS4Q8IUM7 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
NPAS4Q8IUM7 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
NPAS4Q8IUM7 AC109927.2-201ENST00000506416 303 ntBASIC7.39□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms