Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
SNAPC4Q5SXM2 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
SNAPC4Q5SXM2 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC8.89□□□□□ -0.99
SNAPC4Q5SXM2 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
SNAPC4Q5SXM2 RNA5SP326-201ENST00000363209 110 ntBASIC8.89□□□□□ -0.99
SNAPC4Q5SXM2 Y_RNA.126-201ENST00000363382 111 ntBASIC8.89□□□□□ -0.99
SNAPC4Q5SXM2 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
SNAPC4Q5SXM2 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC8.89□□□□□ -0.99
SNAPC4Q5SXM2 AL596266.1-201ENST00000448132 400 ntBASIC8.89□□□□□ -0.99
SNAPC4Q5SXM2 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC8.89□□□□□ -0.99
SNAPC4Q5SXM2 RPS7P6-201ENST00000485777 579 ntBASIC8.89□□□□□ -0.99
SNAPC4Q5SXM2 AC026979.1-201ENST00000492525 396 ntBASIC8.89□□□□□ -0.99
SNAPC4Q5SXM2 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC8.89□□□□□ -0.99
SNAPC4Q5SXM2 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC8.89□□□□□ -0.99
SNAPC4Q5SXM2 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC8.89□□□□□ -0.99
SNAPC4Q5SXM2 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC8.89□□□□□ -0.99
SNAPC4Q5SXM2 AC008033.2-201ENST00000542626 177 ntBASIC8.89□□□□□ -0.99
SNAPC4Q5SXM2 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
SNAPC4Q5SXM2 UBE2FP2-201ENST00000566646 462 ntBASIC8.89□□□□□ -0.99
SNAPC4Q5SXM2 DHFRP1-201ENST00000579682 559 ntBASIC8.89□□□□□ -0.99
SNAPC4Q5SXM2 AP005403.1-201ENST00000579720 229 ntBASIC8.89□□□□□ -0.99
SNAPC4Q5SXM2 EIF3FP1-201ENST00000613970 806 ntBASIC8.89□□□□□ -0.99
SNAPC4Q5SXM2 MIR6780A-201ENST00000615089 68 ntBASIC8.89□□□□□ -0.99
SNAPC4Q5SXM2 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC8.89□□□□□ -0.99
SNAPC4Q5SXM2 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
SNAPC4Q5SXM2 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
SNAPC4Q5SXM2 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
SNAPC4Q5SXM2 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
SNAPC4Q5SXM2 SSPO-201ENST00000378016 15589 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
SNAPC4Q5SXM2 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC8.88□□□□□ -0.99
SNAPC4Q5SXM2 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
SNAPC4Q5SXM2 AL008638.3-201ENST00000623027 5182 ntBASIC8.88□□□□□ -0.99
SNAPC4Q5SXM2 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC8.88□□□□□ -0.99
SNAPC4Q5SXM2 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
SNAPC4Q5SXM2 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC8.88□□□□□ -0.99
SNAPC4Q5SXM2 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
SNAPC4Q5SXM2 RNA5-8SP5-201ENST00000365304 152 ntBASIC8.88□□□□□ -0.99
SNAPC4Q5SXM2 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
SNAPC4Q5SXM2 RNA5SP251-201ENST00000410614 137 ntBASIC8.88□□□□□ -0.99
SNAPC4Q5SXM2 RPL18P10-201ENST00000425606 538 ntBASIC8.88□□□□□ -0.99
SNAPC4Q5SXM2 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC8.88□□□□□ -0.99
SNAPC4Q5SXM2 AC103987.1-201ENST00000473394 348 ntBASIC8.88□□□□□ -0.99
SNAPC4Q5SXM2 RPL23AP72-201ENST00000492447 435 ntBASIC8.88□□□□□ -0.99
SNAPC4Q5SXM2 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC8.88□□□□□ -0.99
SNAPC4Q5SXM2 IGHVIII-76-1-201ENST00000523776 286 ntBASIC8.88□□□□□ -0.99
SNAPC4Q5SXM2 SS18L2P2-201ENST00000583960 235 ntBASIC8.88□□□□□ -0.99
SNAPC4Q5SXM2 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC8.88□□□□□ -0.99
SNAPC4Q5SXM2 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
SNAPC4Q5SXM2 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
SNAPC4Q5SXM2 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
SNAPC4Q5SXM2 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
SNAPC4Q5SXM2 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
SNAPC4Q5SXM2 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
SNAPC4Q5SXM2 LIG3-202ENST00000378526 8400 ntAPPRIS P4 TSL 1 (best) BASIC8.87□□□□□ -0.99
SNAPC4Q5SXM2 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC8.87□□□□□ -0.99
SNAPC4Q5SXM2 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC8.87□□□□□ -0.99
SNAPC4Q5SXM2 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC8.87□□□□□ -0.99
SNAPC4Q5SXM2 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
SNAPC4Q5SXM2 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC8.87□□□□□ -0.99
SNAPC4Q5SXM2 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC8.87□□□□□ -0.99
SNAPC4Q5SXM2 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
SNAPC4Q5SXM2 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
SNAPC4Q5SXM2 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC8.87□□□□□ -0.99
SNAPC4Q5SXM2 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC8.87□□□□□ -0.99
SNAPC4Q5SXM2 AC073410.1-201ENST00000435125 589 ntBASIC8.87□□□□□ -0.99
SNAPC4Q5SXM2 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
SNAPC4Q5SXM2 RPL36AP15-201ENST00000444514 266 ntBASIC8.87□□□□□ -0.99
SNAPC4Q5SXM2 HCG14-201ENST00000444986 413 ntTSL 2 BASIC8.87□□□□□ -0.99
SNAPC4Q5SXM2 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC8.87□□□□□ -0.99
SNAPC4Q5SXM2 AC034205.1-201ENST00000520621 638 ntBASIC8.87□□□□□ -0.99
SNAPC4Q5SXM2 AP006289.1-201ENST00000538089 277 ntBASIC8.87□□□□□ -0.99
SNAPC4Q5SXM2 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC8.87□□□□□ -0.99
SNAPC4Q5SXM2 AL356752.1-201ENST00000615844 593 ntBASIC8.87□□□□□ -0.99
SNAPC4Q5SXM2 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC8.87□□□□□ -0.99
SNAPC4Q5SXM2 MVP-219ENST00000629059 120 ntTSL 5 BASIC8.87□□□□□ -0.99
SNAPC4Q5SXM2 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
SNAPC4Q5SXM2 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
SNAPC4Q5SXM2 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
SNAPC4Q5SXM2 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
SNAPC4Q5SXM2 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
SNAPC4Q5SXM2 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC8.87□□□□□ -0.99
SNAPC4Q5SXM2 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC8.87□□□□□ -0.99
SNAPC4Q5SXM2 HNRNPA1P54-201ENST00000411857 9714 ntBASIC8.87□□□□□ -0.99
SNAPC4Q5SXM2 AC123769.2-201ENST00000624332 5984 ntBASIC8.86□□□□□ -0.99
SNAPC4Q5SXM2 TTC3P1-201ENST00000399586 6081 ntBASIC8.86□□□□□ -0.99
SNAPC4Q5SXM2 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
SNAPC4Q5SXM2 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
SNAPC4Q5SXM2 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
SNAPC4Q5SXM2 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
SNAPC4Q5SXM2 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC8.86□□□□□ -0.99
SNAPC4Q5SXM2 AL078621.3-201ENST00000623707 2042 ntBASIC8.86□□□□□ -0.99
SNAPC4Q5SXM2 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
SNAPC4Q5SXM2 AC012519.1-201ENST00000424588 610 ntBASIC8.86□□□□□ -0.99
SNAPC4Q5SXM2 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC8.86□□□□□ -0.99
SNAPC4Q5SXM2 MTCYBP21-201ENST00000443300 1113 ntBASIC8.86□□□□□ -0.99
SNAPC4Q5SXM2 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC8.86□□□□□ -0.99
SNAPC4Q5SXM2 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC8.86□□□□□ -0.99
SNAPC4Q5SXM2 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC8.86□□□□□ -0.99
SNAPC4Q5SXM2 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC8.86□□□□□ -0.99
SNAPC4Q5SXM2 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms