Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.57□□□□□ -1.36
SHROOM1Q2M3G4 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
SHROOM1Q2M3G4 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SHROOM1Q2M3G4 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
SHROOM1Q2M3G4 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
SHROOM1Q2M3G4 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SHROOM1Q2M3G4 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SHROOM1Q2M3G4 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.57□□□□□ -1.36
SHROOM1Q2M3G4 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SHROOM1Q2M3G4 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.57□□□□□ -1.36
SHROOM1Q2M3G4 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
SHROOM1Q2M3G4 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
SHROOM1Q2M3G4 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.56□□□□□ -1.36
SHROOM1Q2M3G4 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SHROOM1Q2M3G4 AP001284.1-201ENST00000528393 2118 ntBASIC6.56□□□□□ -1.36
SHROOM1Q2M3G4 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
SHROOM1Q2M3G4 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
SHROOM1Q2M3G4 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SHROOM1Q2M3G4 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
SHROOM1Q2M3G4 OR52B5P-201ENST00000435337 951 ntBASIC6.56□□□□□ -1.36
SHROOM1Q2M3G4 RPL7P45-201ENST00000455851 743 ntBASIC6.56□□□□□ -1.36
SHROOM1Q2M3G4 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC6.56□□□□□ -1.36
SHROOM1Q2M3G4 RN7SL30P-201ENST00000488416 306 ntBASIC6.56□□□□□ -1.36
SHROOM1Q2M3G4 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.56□□□□□ -1.36
SHROOM1Q2M3G4 RNU6-964P-201ENST00000516524 69 ntBASIC6.56□□□□□ -1.36
SHROOM1Q2M3G4 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC6.56□□□□□ -1.36
SHROOM1Q2M3G4 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.56□□□□□ -1.36
SHROOM1Q2M3G4 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC6.56□□□□□ -1.36
SHROOM1Q2M3G4 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.56□□□□□ -1.36
SHROOM1Q2M3G4 OR52B5P-202ENST00000641118 1110 ntBASIC6.56□□□□□ -1.36
SHROOM1Q2M3G4 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
SHROOM1Q2M3G4 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.56□□□□□ -1.36
SHROOM1Q2M3G4 AC020633.1-201ENST00000468439 2247 ntBASIC6.56□□□□□ -1.36
SHROOM1Q2M3G4 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.56□□□□□ -1.36
SHROOM1Q2M3G4 AC104964.3-201ENST00000606115 2860 ntBASIC6.55□□□□□ -1.36
SHROOM1Q2M3G4 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SHROOM1Q2M3G4 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SHROOM1Q2M3G4 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
SHROOM1Q2M3G4 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.55□□□□□ -1.36
SHROOM1Q2M3G4 MIR133B-201ENST00000362210 119 ntBASIC6.55□□□□□ -1.36
SHROOM1Q2M3G4 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.55□□□□□ -1.36
SHROOM1Q2M3G4 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SHROOM1Q2M3G4 OR4K12P-201ENST00000406538 961 ntBASIC6.55□□□□□ -1.36
SHROOM1Q2M3G4 AC096921.1-201ENST00000411661 375 ntBASIC6.55□□□□□ -1.36
SHROOM1Q2M3G4 RPSAP35-201ENST00000413753 818 ntBASIC6.55□□□□□ -1.36
SHROOM1Q2M3G4 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SHROOM1Q2M3G4 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.55□□□□□ -1.36
SHROOM1Q2M3G4 RPL12P39-201ENST00000455456 496 ntBASIC6.55□□□□□ -1.36
SHROOM1Q2M3G4 AC012123.2-201ENST00000485809 248 ntBASIC6.55□□□□□ -1.36
SHROOM1Q2M3G4 BLZF2P-201ENST00000553776 1130 ntBASIC6.55□□□□□ -1.36
SHROOM1Q2M3G4 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC6.55□□□□□ -1.36
SHROOM1Q2M3G4 DHFRP1-201ENST00000579682 559 ntBASIC6.55□□□□□ -1.36
SHROOM1Q2M3G4 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SHROOM1Q2M3G4 AC007114.2-201ENST00000576014 4281 ntBASIC6.55□□□□□ -1.36
SHROOM1Q2M3G4 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
SHROOM1Q2M3G4 AC007159.1-201ENST00000566529 4706 ntBASIC6.55□□□□□ -1.36
SHROOM1Q2M3G4 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
SHROOM1Q2M3G4 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SHROOM1Q2M3G4 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SHROOM1Q2M3G4 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SHROOM1Q2M3G4 AL353796.1-201ENST00000561542 3241 ntBASIC6.55□□□□□ -1.36
SHROOM1Q2M3G4 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.55□□□□□ -1.36
SHROOM1Q2M3G4 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
SHROOM1Q2M3G4 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.55□□□□□ -1.36
SHROOM1Q2M3G4 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
SHROOM1Q2M3G4 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
SHROOM1Q2M3G4 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.54□□□□□ -1.36
SHROOM1Q2M3G4 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SHROOM1Q2M3G4 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.54□□□□□ -1.36
SHROOM1Q2M3G4 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.54□□□□□ -1.36
SHROOM1Q2M3G4 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SHROOM1Q2M3G4 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SHROOM1Q2M3G4 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
SHROOM1Q2M3G4 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.54□□□□□ -1.36
SHROOM1Q2M3G4 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
SHROOM1Q2M3G4 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SHROOM1Q2M3G4 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.54□□□□□ -1.36
SHROOM1Q2M3G4 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC6.54□□□□□ -1.36
SHROOM1Q2M3G4 DPPA2P2-201ENST00000418220 897 ntBASIC6.54□□□□□ -1.36
SHROOM1Q2M3G4 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC6.54□□□□□ -1.36
SHROOM1Q2M3G4 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.54□□□□□ -1.36
SHROOM1Q2M3G4 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
SHROOM1Q2M3G4 FAR2P1-206ENST00000449736 709 ntBASIC6.54□□□□□ -1.36
SHROOM1Q2M3G4 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC6.54□□□□□ -1.36
SHROOM1Q2M3G4 RN7SL172P-201ENST00000460535 303 ntBASIC6.54□□□□□ -1.36
SHROOM1Q2M3G4 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SHROOM1Q2M3G4 OR2AO1P-201ENST00000476497 403 ntBASIC6.54□□□□□ -1.36
SHROOM1Q2M3G4 AC079841.1-201ENST00000481228 950 ntBASIC6.54□□□□□ -1.36
SHROOM1Q2M3G4 RPS7P6-201ENST00000485777 579 ntBASIC6.54□□□□□ -1.36
SHROOM1Q2M3G4 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC6.54□□□□□ -1.36
SHROOM1Q2M3G4 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC6.54□□□□□ -1.36
SHROOM1Q2M3G4 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC6.54□□□□□ -1.36
SHROOM1Q2M3G4 AC021733.2-201ENST00000518830 497 ntBASIC6.54□□□□□ -1.36
SHROOM1Q2M3G4 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.54□□□□□ -1.36
SHROOM1Q2M3G4 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.54□□□□□ -1.36
SHROOM1Q2M3G4 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
SHROOM1Q2M3G4 AC078878.1-201ENST00000539832 958 ntBASIC6.54□□□□□ -1.36
SHROOM1Q2M3G4 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC6.54□□□□□ -1.36
SHROOM1Q2M3G4 AC106730.2-201ENST00000566641 540 ntBASIC6.54□□□□□ -1.36
SHROOM1Q2M3G4 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms