Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.21□□□□□ -1.74
CMC4P56277 WBP1LP8-201ENST00000617401 327 ntBASIC4.21□□□□□ -1.74
CMC4P56277 AC026124.2-201ENST00000621847 656 ntBASIC4.21□□□□□ -1.74
CMC4P56277 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CMC4P56277 AC005618.4-201ENST00000625053 554 ntBASIC4.21□□□□□ -1.74
CMC4P56277 SNORA17.5-201ENST00000630429 132 ntBASIC4.21□□□□□ -1.74
CMC4P56277 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CMC4P56277 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CMC4P56277 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC4.21□□□□□ -1.74
CMC4P56277 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CMC4P56277 AL355488.2-201ENST00000609909 2850 ntBASIC4.21□□□□□ -1.74
CMC4P56277 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC4.21□□□□□ -1.74
CMC4P56277 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CMC4P56277 AC011504.1-201ENST00000623331 4103 ntBASIC4.21□□□□□ -1.74
CMC4P56277 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CMC4P56277 YES1P1-201ENST00000418510 1628 ntBASIC4.21□□□□□ -1.74
CMC4P56277 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CMC4P56277 MFSD8-219ENST00000641228 2559 ntBASIC4.2□□□□□ -1.74
CMC4P56277 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CMC4P56277 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
CMC4P56277 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CMC4P56277 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CMC4P56277 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CMC4P56277 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CMC4P56277 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CMC4P56277 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CMC4P56277 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.2□□□□□ -1.74
CMC4P56277 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CMC4P56277 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CMC4P56277 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CMC4P56277 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CMC4P56277 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CMC4P56277 TMSB4XP4-201ENST00000323496 618 ntBASIC4.2□□□□□ -1.74
CMC4P56277 AL121886.1-201ENST00000358609 435 ntBASIC4.2□□□□□ -1.74
CMC4P56277 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CMC4P56277 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC4.2□□□□□ -1.74
CMC4P56277 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC4.2□□□□□ -1.74
CMC4P56277 RPS6P23-201ENST00000413224 722 ntBASIC4.2□□□□□ -1.74
CMC4P56277 AC127526.2-201ENST00000426436 775 ntBASIC4.2□□□□□ -1.74
CMC4P56277 NPM1P48-201ENST00000436002 853 ntBASIC4.2□□□□□ -1.74
CMC4P56277 BX679664.2-201ENST00000439282 283 ntBASIC4.2□□□□□ -1.74
CMC4P56277 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC4.2□□□□□ -1.74
CMC4P56277 HMGN1P36-201ENST00000446623 298 ntBASIC4.2□□□□□ -1.74
CMC4P56277 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC4.2□□□□□ -1.74
CMC4P56277 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC4.2□□□□□ -1.74
CMC4P56277 snoU13.29-201ENST00000459370 104 ntBASIC4.2□□□□□ -1.74
CMC4P56277 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CMC4P56277 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC4.2□□□□□ -1.74
CMC4P56277 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC4.2□□□□□ -1.74
CMC4P56277 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC4.2□□□□□ -1.74
CMC4P56277 RN7SKP99-201ENST00000517028 307 ntBASIC4.2□□□□□ -1.74
CMC4P56277 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CMC4P56277 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC4.2□□□□□ -1.74
CMC4P56277 MRPS16P1-201ENST00000523462 412 ntBASIC4.2□□□□□ -1.74
CMC4P56277 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC4.2□□□□□ -1.74
CMC4P56277 AC137627.1-201ENST00000545761 289 ntBASIC4.2□□□□□ -1.74
CMC4P56277 AC139697.1-201ENST00000548429 745 ntBASIC4.2□□□□□ -1.74
CMC4P56277 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC4.2□□□□□ -1.74
CMC4P56277 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CMC4P56277 CASC22-201ENST00000569713 386 ntTSL 5 BASIC4.2□□□□□ -1.74
CMC4P56277 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC4.2□□□□□ -1.74
CMC4P56277 AC093388.1-201ENST00000609166 430 ntBASIC4.2□□□□□ -1.74
CMC4P56277 AC126175.1-201ENST00000617041 758 ntBASIC4.2□□□□□ -1.74
CMC4P56277 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.2□□□□□ -1.74
CMC4P56277 AC009950.2-201ENST00000636548 183 ntBASIC4.2□□□□□ -1.74
CMC4P56277 AC074101.1-201ENST00000637861 241 ntBASIC4.2□□□□□ -1.74
CMC4P56277 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CMC4P56277 SAMMSON-209ENST00000641222 1100 ntBASIC4.2□□□□□ -1.74
CMC4P56277 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CMC4P56277 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC4.2□□□□□ -1.74
CMC4P56277 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CMC4P56277 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CMC4P56277 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
CMC4P56277 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CMC4P56277 SCARNA15-201ENST00000607520 4325 ntBASIC4.2□□□□□ -1.74
CMC4P56277 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
CMC4P56277 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.2□□□□□ -1.74
CMC4P56277 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CMC4P56277 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
CMC4P56277 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CMC4P56277 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC4.19□□□□□ -1.74
CMC4P56277 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
CMC4P56277 AC005005.4-201ENST00000623789 16698 ntBASIC4.19□□□□□ -1.74
CMC4P56277 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CMC4P56277 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC4.19□□□□□ -1.74
CMC4P56277 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CMC4P56277 NAMPTP1-201ENST00000440465 2514 ntBASIC4.19□□□□□ -1.74
CMC4P56277 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC4.19□□□□□ -1.74
CMC4P56277 GTF2IP4-201ENST00000453092 2054 ntBASIC4.19□□□□□ -1.74
CMC4P56277 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC4.19□□□□□ -1.74
CMC4P56277 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
CMC4P56277 SNORA64.1-201ENST00000362600 132 ntBASIC4.19□□□□□ -1.74
CMC4P56277 RN7SKP292-201ENST00000365522 317 ntBASIC4.19□□□□□ -1.74
CMC4P56277 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CMC4P56277 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CMC4P56277 CDY17P-201ENST00000414121 1282 ntBASIC4.19□□□□□ -1.74
CMC4P56277 EEF1A1P29-201ENST00000416082 1096 ntBASIC4.19□□□□□ -1.74
CMC4P56277 NENFP1-201ENST00000419476 466 ntBASIC4.19□□□□□ -1.74
CMC4P56277 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.19□□□□□ -1.74
CMC4P56277 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms