Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.33□□□□□ -1.4
COPB1P53618 AC006453.5-201ENST00000636451 619 ntBASIC6.33□□□□□ -1.4
COPB1P53618 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COPB1P53618 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
COPB1P53618 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.33□□□□□ -1.4
COPB1P53618 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.33□□□□□ -1.4
COPB1P53618 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.33□□□□□ -1.4
COPB1P53618 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
COPB1P53618 Z95114.1-201ENST00000624264 14574 ntBASIC6.33□□□□□ -1.4
COPB1P53618 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.33□□□□□ -1.4
COPB1P53618 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.32□□□□□ -1.4
COPB1P53618 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
COPB1P53618 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
COPB1P53618 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
COPB1P53618 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
COPB1P53618 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
COPB1P53618 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
COPB1P53618 AC117409.1-201ENST00000470499 1310 ntBASIC6.32□□□□□ -1.4
COPB1P53618 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
COPB1P53618 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
COPB1P53618 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
COPB1P53618 AP001002.1-201ENST00000625148 1513 ntBASIC6.32□□□□□ -1.4
COPB1P53618 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
COPB1P53618 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
COPB1P53618 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.32□□□□□ -1.4
COPB1P53618 RN7SKP269-201ENST00000365545 319 ntBASIC6.32□□□□□ -1.4
COPB1P53618 MIR130B-202ENST00000385018 82 ntBASIC6.32□□□□□ -1.4
COPB1P53618 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
COPB1P53618 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
COPB1P53618 AL354890.1-201ENST00000413730 346 ntBASIC6.32□□□□□ -1.4
COPB1P53618 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC6.32□□□□□ -1.4
COPB1P53618 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC6.32□□□□□ -1.4
COPB1P53618 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.32□□□□□ -1.4
COPB1P53618 DEFA9P-201ENST00000433042 285 ntBASIC6.32□□□□□ -1.4
COPB1P53618 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.32□□□□□ -1.4
COPB1P53618 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.32□□□□□ -1.4
COPB1P53618 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC6.32□□□□□ -1.4
COPB1P53618 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
COPB1P53618 OR7E116P-201ENST00000448529 957 ntBASIC6.32□□□□□ -1.4
COPB1P53618 HMGB1P7-201ENST00000450921 612 ntBASIC6.32□□□□□ -1.4
COPB1P53618 RPS7P6-201ENST00000485777 579 ntBASIC6.32□□□□□ -1.4
COPB1P53618 AC021006.1-201ENST00000489849 553 ntBASIC6.32□□□□□ -1.4
COPB1P53618 AC112484.3-201ENST00000505910 329 ntBASIC6.32□□□□□ -1.4
COPB1P53618 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC6.32□□□□□ -1.4
COPB1P53618 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
COPB1P53618 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.32□□□□□ -1.4
COPB1P53618 AC137627.1-201ENST00000545761 289 ntBASIC6.32□□□□□ -1.4
COPB1P53618 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC6.32□□□□□ -1.4
COPB1P53618 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC6.32□□□□□ -1.4
COPB1P53618 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.32□□□□□ -1.4
COPB1P53618 AC092332.1-201ENST00000563684 829 ntBASIC6.32□□□□□ -1.4
COPB1P53618 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
COPB1P53618 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC6.32□□□□□ -1.4
COPB1P53618 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC6.32□□□□□ -1.4
COPB1P53618 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.32□□□□□ -1.4
COPB1P53618 OR7A8P-201ENST00000595427 913 ntBASIC6.32□□□□□ -1.4
COPB1P53618 OR4H6P-202ENST00000603819 340 ntBASIC6.32□□□□□ -1.4
COPB1P53618 AC026979.4-201ENST00000606555 645 ntBASIC6.32□□□□□ -1.4
COPB1P53618 AL391834.1-201ENST00000609609 560 ntBASIC6.32□□□□□ -1.4
COPB1P53618 AL391834.2-201ENST00000609982 546 ntBASIC6.32□□□□□ -1.4
COPB1P53618 uc_338.31-201ENST00000615595 186 ntBASIC6.32□□□□□ -1.4
COPB1P53618 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC6.32□□□□□ -1.4
COPB1P53618 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
COPB1P53618 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
COPB1P53618 AL592429.1-201ENST00000403909 1473 ntBASIC6.32□□□□□ -1.4
COPB1P53618 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
COPB1P53618 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
COPB1P53618 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
COPB1P53618 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.32□□□□□ -1.4
COPB1P53618 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
COPB1P53618 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
COPB1P53618 UGT2B24P-201ENST00000514441 1597 ntBASIC6.31□□□□□ -1.4
COPB1P53618 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
COPB1P53618 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
COPB1P53618 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.31□□□□□ -1.4
COPB1P53618 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
COPB1P53618 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
COPB1P53618 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
COPB1P53618 SNORA51.9-201ENST00000384295 124 ntBASIC6.31□□□□□ -1.4
COPB1P53618 AC016739.1-201ENST00000405359 345 ntBASIC6.31□□□□□ -1.4
COPB1P53618 AL355143.1-201ENST00000407101 841 ntBASIC6.31□□□□□ -1.4
COPB1P53618 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC6.31□□□□□ -1.4
COPB1P53618 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.31□□□□□ -1.4
COPB1P53618 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC6.31□□□□□ -1.4
COPB1P53618 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC6.31□□□□□ -1.4
COPB1P53618 MED28P3-201ENST00000444288 531 ntBASIC6.31□□□□□ -1.4
COPB1P53618 AC023271.1-201ENST00000445936 1090 ntBASIC6.31□□□□□ -1.4
COPB1P53618 MTND5P8-201ENST00000449817 1083 ntBASIC6.31□□□□□ -1.4
COPB1P53618 RN7SL197P-201ENST00000466981 299 ntBASIC6.31□□□□□ -1.4
COPB1P53618 DUTP1-201ENST00000493631 470 ntBASIC6.31□□□□□ -1.4
COPB1P53618 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC6.31□□□□□ -1.4
COPB1P53618 AC010374.2-201ENST00000512933 535 ntBASIC6.31□□□□□ -1.4
COPB1P53618 RN7SKP35-201ENST00000517210 151 ntBASIC6.31□□□□□ -1.4
COPB1P53618 IGKV3D-25-201ENST00000519599 235 ntBASIC6.31□□□□□ -1.4
COPB1P53618 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC6.31□□□□□ -1.4
COPB1P53618 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC6.31□□□□□ -1.4
COPB1P53618 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.31□□□□□ -1.4
COPB1P53618 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.31□□□□□ -1.4
COPB1P53618 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC6.31□□□□□ -1.4
COPB1P53618 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms