Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 AC093655.2-201ENST00000425735 631 ntBASIC7.75□□□□□ -1.17
MSH6P52701 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC7.75□□□□□ -1.17
MSH6P52701 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC7.75□□□□□ -1.17
MSH6P52701 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC7.75□□□□□ -1.17
MSH6P52701 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC7.75□□□□□ -1.17
MSH6P52701 AC008897.1-201ENST00000494006 347 ntBASIC7.75□□□□□ -1.17
MSH6P52701 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC7.75□□□□□ -1.17
MSH6P52701 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC7.75□□□□□ -1.17
MSH6P52701 AC127381.1-201ENST00000555979 939 ntBASIC7.75□□□□□ -1.17
MSH6P52701 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
MSH6P52701 MIR4311-201ENST00000580794 100 ntBASIC7.75□□□□□ -1.17
MSH6P52701 AC087385.3-201ENST00000620477 187 ntBASIC7.75□□□□□ -1.17
MSH6P52701 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC7.75□□□□□ -1.17
MSH6P52701 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC7.75□□□□□ -1.17
MSH6P52701 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
MSH6P52701 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
MSH6P52701 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
MSH6P52701 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC7.75□□□□□ -1.17
MSH6P52701 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC7.75□□□□□ -1.17
MSH6P52701 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC7.75□□□□□ -1.17
MSH6P52701 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
MSH6P52701 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC7.75□□□□□ -1.17
MSH6P52701 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
MSH6P52701 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC7.74□□□□□ -1.17
MSH6P52701 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
MSH6P52701 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
MSH6P52701 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
MSH6P52701 RNU1-32P-201ENST00000363937 159 ntBASIC7.74□□□□□ -1.17
MSH6P52701 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC7.74□□□□□ -1.17
MSH6P52701 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
MSH6P52701 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC7.74□□□□□ -1.17
MSH6P52701 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC7.74□□□□□ -1.17
MSH6P52701 AC068587.1-201ENST00000483613 781 ntBASIC7.74□□□□□ -1.17
MSH6P52701 FTH1P8-201ENST00000498161 514 ntBASIC7.74□□□□□ -1.17
MSH6P52701 AC004980.4-201ENST00000513375 203 ntBASIC7.74□□□□□ -1.17
MSH6P52701 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC7.74□□□□□ -1.17
MSH6P52701 AC011447.4-201ENST00000587562 111 ntBASIC7.74□□□□□ -1.17
MSH6P52701 TEX41-254ENST00000626394 423 ntTSL 5 BASIC7.74□□□□□ -1.17
MSH6P52701 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC7.74□□□□□ -1.17
MSH6P52701 AC074101.1-201ENST00000637861 241 ntBASIC7.74□□□□□ -1.17
MSH6P52701 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC7.74□□□□□ -1.17
MSH6P52701 AC007114.2-201ENST00000576014 4281 ntBASIC7.74□□□□□ -1.17
MSH6P52701 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC7.74□□□□□ -1.17
MSH6P52701 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC7.74□□□□□ -1.17
MSH6P52701 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
MSH6P52701 CASC19-221ENST00000641309 1382 ntBASIC7.74□□□□□ -1.17
MSH6P52701 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC7.74□□□□□ -1.17
MSH6P52701 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC7.74□□□□□ -1.17
MSH6P52701 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
MSH6P52701 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC7.74□□□□□ -1.17
MSH6P52701 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
MSH6P52701 AL121768.1-201ENST00000613917 2544 ntBASIC7.74□□□□□ -1.17
MSH6P52701 RNA5SP487-201ENST00000410186 122 ntBASIC7.73□□□□□ -1.17
MSH6P52701 RN7SKP126-201ENST00000411143 300 ntBASIC7.73□□□□□ -1.17
MSH6P52701 AC211486.3-201ENST00000412694 621 ntBASIC7.73□□□□□ -1.17
MSH6P52701 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC7.73□□□□□ -1.17
MSH6P52701 AC007562.1-201ENST00000421819 517 ntBASIC7.73□□□□□ -1.17
MSH6P52701 RPL7P56-201ENST00000429441 717 ntBASIC7.73□□□□□ -1.17
MSH6P52701 AC023274.2-201ENST00000445264 521 ntBASIC7.73□□□□□ -1.17
MSH6P52701 AC073072.2-201ENST00000447425 348 ntBASIC7.73□□□□□ -1.17
MSH6P52701 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC7.73□□□□□ -1.17
MSH6P52701 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC7.73□□□□□ -1.17
MSH6P52701 PDCL3P4-201ENST00000489621 720 ntBASIC7.73□□□□□ -1.17
MSH6P52701 RPL17P2-201ENST00000491913 451 ntBASIC7.73□□□□□ -1.17
MSH6P52701 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC7.73□□□□□ -1.17
MSH6P52701 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC7.73□□□□□ -1.17
MSH6P52701 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC7.73□□□□□ -1.17
MSH6P52701 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC7.73□□□□□ -1.17
MSH6P52701 CYP4F27P-201ENST00000514557 494 ntBASIC7.73□□□□□ -1.17
MSH6P52701 AC005000.1-201ENST00000536192 288 ntBASIC7.73□□□□□ -1.17
MSH6P52701 AL355974.3-201ENST00000617383 467 ntBASIC7.73□□□□□ -1.17
MSH6P52701 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
MSH6P52701 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC7.73□□□□□ -1.17
MSH6P52701 USP9YP3-201ENST00000434481 1766 ntBASIC7.73□□□□□ -1.17
MSH6P52701 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
MSH6P52701 WBP11P1-201ENST00000562560 1931 ntBASIC7.73□□□□□ -1.17
MSH6P52701 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
MSH6P52701 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
MSH6P52701 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
MSH6P52701 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
MSH6P52701 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC7.73□□□□□ -1.17
MSH6P52701 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC7.73□□□□□ -1.17
MSH6P52701 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC7.73□□□□□ -1.17
MSH6P52701 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
MSH6P52701 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
MSH6P52701 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
MSH6P52701 NLRP3P1-201ENST00000622303 1785 ntBASIC7.73□□□□□ -1.17
MSH6P52701 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC7.73□□□□□ -1.17
MSH6P52701 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
MSH6P52701 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
MSH6P52701 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
MSH6P52701 TEX41-205ENST00000431734 529 ntTSL 4 BASIC7.72□□□□□ -1.17
MSH6P52701 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC7.72□□□□□ -1.17
MSH6P52701 AL356981.1-201ENST00000454879 684 ntBASIC7.72□□□□□ -1.17
MSH6P52701 RPL7L1P3-201ENST00000455249 689 ntBASIC7.72□□□□□ -1.17
MSH6P52701 AC096741.1-201ENST00000472250 846 ntBASIC7.72□□□□□ -1.17
MSH6P52701 STRADBP1-201ENST00000478954 1281 ntBASIC7.72□□□□□ -1.17
MSH6P52701 AL035690.1-201ENST00000490892 383 ntBASIC7.72□□□□□ -1.17
MSH6P52701 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC7.72□□□□□ -1.17
MSH6P52701 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC7.72□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms