Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC9.6□□□□□ -0.87
SMARCA4P51532 OR5AN2P-201ENST00000534535 896 ntBASIC9.6□□□□□ -0.87
SMARCA4P51532 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC9.6□□□□□ -0.87
SMARCA4P51532 MIR6758-201ENST00000620653 63 ntBASIC9.6□□□□□ -0.87
SMARCA4P51532 WNT2B-203ENST00000369686 10879 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
SMARCA4P51532 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC9.6□□□□□ -0.87
SMARCA4P51532 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC9.6□□□□□ -0.87
SMARCA4P51532 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC9.6□□□□□ -0.87
SMARCA4P51532 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SMARCA4P51532 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
SMARCA4P51532 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC9.6□□□□□ -0.87
SMARCA4P51532 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
SMARCA4P51532 AC114774.1-201ENST00000507410 1770 ntBASIC9.6□□□□□ -0.87
SMARCA4P51532 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SMARCA4P51532 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
SMARCA4P51532 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC9.6□□□□□ -0.87
SMARCA4P51532 RPS4XP16-201ENST00000427198 791 ntBASIC9.6□□□□□ -0.87
SMARCA4P51532 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC9.6□□□□□ -0.87
SMARCA4P51532 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC9.6□□□□□ -0.87
SMARCA4P51532 EIF3FP1-201ENST00000613970 806 ntBASIC9.6□□□□□ -0.87
SMARCA4P51532 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SMARCA4P51532 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SMARCA4P51532 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SMARCA4P51532 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
SMARCA4P51532 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SMARCA4P51532 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
SMARCA4P51532 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC9.59□□□□□ -0.87
SMARCA4P51532 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC9.59□□□□□ -0.87
SMARCA4P51532 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC9.59□□□□□ -0.87
SMARCA4P51532 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SMARCA4P51532 PKHD1-201ENST00000340994 11589 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
SMARCA4P51532 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
SMARCA4P51532 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC9.59□□□□□ -0.87
SMARCA4P51532 AL449283.1-201ENST00000602631 3403 ntBASIC9.59□□□□□ -0.87
SMARCA4P51532 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC9.59□□□□□ -0.87
SMARCA4P51532 AL121977.1-201ENST00000401636 979 ntBASIC9.59□□□□□ -0.87
SMARCA4P51532 NUDT19P3-201ENST00000404698 555 ntBASIC9.59□□□□□ -0.87
SMARCA4P51532 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
SMARCA4P51532 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SMARCA4P51532 RIMKLBP2-201ENST00000424737 654 ntBASIC9.59□□□□□ -0.87
SMARCA4P51532 C4BPAP2-201ENST00000428434 478 ntBASIC9.59□□□□□ -0.87
SMARCA4P51532 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC9.59□□□□□ -0.87
SMARCA4P51532 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC9.59□□□□□ -0.87
SMARCA4P51532 AC009237.13-201ENST00000603193 276 ntBASIC9.59□□□□□ -0.87
SMARCA4P51532 AL023583.1-201ENST00000607518 1143 ntBASIC9.59□□□□□ -0.87
SMARCA4P51532 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
SMARCA4P51532 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SMARCA4P51532 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC9.59□□□□□ -0.87
SMARCA4P51532 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SMARCA4P51532 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
SMARCA4P51532 OR4F13P-202ENST00000560066 2054 ntBASIC9.58□□□□□ -0.88
SMARCA4P51532 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SMARCA4P51532 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SMARCA4P51532 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
SMARCA4P51532 AL590399.4-201ENST00000436561 601 ntBASIC9.58□□□□□ -0.88
SMARCA4P51532 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC9.58□□□□□ -0.88
SMARCA4P51532 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC9.58□□□□□ -0.88
SMARCA4P51532 SLC25A51P1-201ENST00000468432 871 ntBASIC9.58□□□□□ -0.88
SMARCA4P51532 STRADBP1-201ENST00000478954 1281 ntBASIC9.58□□□□□ -0.88
SMARCA4P51532 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC9.58□□□□□ -0.88
SMARCA4P51532 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
SMARCA4P51532 AL161616.1-201ENST00000611867 286 ntBASIC9.58□□□□□ -0.88
SMARCA4P51532 MIR6780A-201ENST00000615089 68 ntBASIC9.58□□□□□ -0.88
SMARCA4P51532 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SMARCA4P51532 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC9.58□□□□□ -0.88
SMARCA4P51532 IL22RA2-201ENST00000296980 2886 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
SMARCA4P51532 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC9.58□□□□□ -0.88
SMARCA4P51532 AC068870.1-201ENST00000563737 2455 ntBASIC9.58□□□□□ -0.88
SMARCA4P51532 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SMARCA4P51532 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC9.57□□□□□ -0.88
SMARCA4P51532 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC9.57□□□□□ -0.88
SMARCA4P51532 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SMARCA4P51532 AC079741.1-201ENST00000321498 212 ntBASIC9.57□□□□□ -0.88
SMARCA4P51532 RNA5SP428-201ENST00000365129 132 ntBASIC9.57□□□□□ -0.88
SMARCA4P51532 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SMARCA4P51532 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC9.57□□□□□ -0.88
SMARCA4P51532 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC9.57□□□□□ -0.88
SMARCA4P51532 NDUFAF4P3-201ENST00000456468 525 ntBASIC9.57□□□□□ -0.88
SMARCA4P51532 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC9.57□□□□□ -0.88
SMARCA4P51532 PDCL3P4-201ENST00000489621 720 ntBASIC9.57□□□□□ -0.88
SMARCA4P51532 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
SMARCA4P51532 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC9.57□□□□□ -0.88
SMARCA4P51532 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
SMARCA4P51532 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SMARCA4P51532 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
SMARCA4P51532 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
SMARCA4P51532 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SMARCA4P51532 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC9.57□□□□□ -0.88
SMARCA4P51532 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SMARCA4P51532 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SMARCA4P51532 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
SMARCA4P51532 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
SMARCA4P51532 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
SMARCA4P51532 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
SMARCA4P51532 GAPDHP15-201ENST00000398586 975 ntBASIC9.56□□□□□ -0.88
SMARCA4P51532 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC9.56□□□□□ -0.88
SMARCA4P51532 AC073072.2-201ENST00000447425 348 ntBASIC9.56□□□□□ -0.88
SMARCA4P51532 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC9.56□□□□□ -0.88
SMARCA4P51532 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC9.56□□□□□ -0.88
SMARCA4P51532 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC9.56□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms