Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
SMARCA2P51531 AL009179.1-201ENST00000406085 265 ntBASIC9.66□□□□□ -0.86
SMARCA2P51531 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
SMARCA2P51531 TMEM183AP1-205ENST00000432739 290 ntBASIC9.66□□□□□ -0.86
SMARCA2P51531 AC073264.2-201ENST00000448886 166 ntBASIC9.66□□□□□ -0.86
SMARCA2P51531 AC079080.1-201ENST00000479841 822 ntBASIC9.66□□□□□ -0.86
SMARCA2P51531 ATP5LP5-201ENST00000483050 299 ntBASIC9.66□□□□□ -0.86
SMARCA2P51531 GTF2F2P1-201ENST00000511083 675 ntBASIC9.66□□□□□ -0.86
SMARCA2P51531 AC020910.2-201ENST00000603635 610 ntBASIC9.66□□□□□ -0.86
SMARCA2P51531 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
SMARCA2P51531 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
SMARCA2P51531 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC9.66□□□□□ -0.86
SMARCA2P51531 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
SMARCA2P51531 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
SMARCA2P51531 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
SMARCA2P51531 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC9.65□□□□□ -0.86
SMARCA2P51531 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC9.65□□□□□ -0.86
SMARCA2P51531 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC9.65□□□□□ -0.86
SMARCA2P51531 AC009962.1-201ENST00000567327 3813 ntBASIC9.65□□□□□ -0.86
SMARCA2P51531 MIR1254-2-201ENST00000579553 63 ntBASIC9.65□□□□□ -0.86
SMARCA2P51531 MIR4270-201ENST00000581799 70 ntBASIC9.65□□□□□ -0.86
SMARCA2P51531 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC9.65□□□□□ -0.86
SMARCA2P51531 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC9.65□□□□□ -0.86
SMARCA2P51531 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
SMARCA2P51531 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC9.65□□□□□ -0.86
SMARCA2P51531 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
SMARCA2P51531 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC9.65□□□□□ -0.87
SMARCA2P51531 AL078621.3-201ENST00000623707 2042 ntBASIC9.64□□□□□ -0.87
SMARCA2P51531 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
SMARCA2P51531 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC9.64□□□□□ -0.87
SMARCA2P51531 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC9.64□□□□□ -0.87
SMARCA2P51531 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
SMARCA2P51531 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
SMARCA2P51531 RNA5SP479-201ENST00000364858 117 ntBASIC9.64□□□□□ -0.87
SMARCA2P51531 SNORA62-201ENST00000365493 153 ntBASIC9.64□□□□□ -0.87
SMARCA2P51531 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC9.64□□□□□ -0.87
SMARCA2P51531 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC9.64□□□□□ -0.87
SMARCA2P51531 RPL12P17-201ENST00000432393 498 ntBASIC9.64□□□□□ -0.87
SMARCA2P51531 NDUFA5P8-201ENST00000449019 346 ntBASIC9.64□□□□□ -0.87
SMARCA2P51531 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC9.64□□□□□ -0.87
SMARCA2P51531 RN7SKP253-201ENST00000516424 309 ntBASIC9.64□□□□□ -0.87
SMARCA2P51531 AL161616.1-201ENST00000611867 286 ntBASIC9.64□□□□□ -0.87
SMARCA2P51531 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC9.64□□□□□ -0.87
SMARCA2P51531 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
SMARCA2P51531 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
SMARCA2P51531 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC9.64□□□□□ -0.87
SMARCA2P51531 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
SMARCA2P51531 AC132825.1-201ENST00000463573 2247 ntBASIC9.64□□□□□ -0.87
SMARCA2P51531 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
SMARCA2P51531 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SMARCA2P51531 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SMARCA2P51531 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
SMARCA2P51531 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC9.63□□□□□ -0.87
SMARCA2P51531 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC9.63□□□□□ -0.87
SMARCA2P51531 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SMARCA2P51531 RNA5SP251-201ENST00000410614 137 ntBASIC9.63□□□□□ -0.87
SMARCA2P51531 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC9.63□□□□□ -0.87
SMARCA2P51531 RN7SL356P-201ENST00000582228 248 ntBASIC9.63□□□□□ -0.87
SMARCA2P51531 AC104687.2-201ENST00000604442 342 ntBASIC9.63□□□□□ -0.87
SMARCA2P51531 AL683813.2-201ENST00000605245 502 ntBASIC9.63□□□□□ -0.87
SMARCA2P51531 HIRAP1-201ENST00000605318 787 ntBASIC9.63□□□□□ -0.87
SMARCA2P51531 AL356752.1-201ENST00000615844 593 ntBASIC9.63□□□□□ -0.87
SMARCA2P51531 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC9.63□□□□□ -0.87
SMARCA2P51531 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
SMARCA2P51531 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SMARCA2P51531 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
SMARCA2P51531 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SMARCA2P51531 JPX-212ENST00000639185 9658 ntTSL 5 BASIC9.63□□□□□ -0.87
SMARCA2P51531 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
SMARCA2P51531 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
SMARCA2P51531 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
SMARCA2P51531 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SMARCA2P51531 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
SMARCA2P51531 HNRNPA1P54-201ENST00000411857 9714 ntBASIC9.63□□□□□ -0.87
SMARCA2P51531 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
SMARCA2P51531 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
SMARCA2P51531 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
SMARCA2P51531 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
SMARCA2P51531 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC9.63□□□□□ -0.87
SMARCA2P51531 RNF10P1-201ENST00000418589 369 ntBASIC9.63□□□□□ -0.87
SMARCA2P51531 OR2AM1P-201ENST00000422137 422 ntBASIC9.63□□□□□ -0.87
SMARCA2P51531 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC9.63□□□□□ -0.87
SMARCA2P51531 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC9.63□□□□□ -0.87
SMARCA2P51531 NDUFA12P1-201ENST00000455914 406 ntBASIC9.63□□□□□ -0.87
SMARCA2P51531 snoU13.20-201ENST00000459180 104 ntBASIC9.63□□□□□ -0.87
SMARCA2P51531 AC078899.1-201ENST00000521432 1185 ntBASIC9.63□□□□□ -0.87
SMARCA2P51531 OR5AN2P-201ENST00000534535 896 ntBASIC9.63□□□□□ -0.87
SMARCA2P51531 AC009597.2-201ENST00000604659 592 ntBASIC9.63□□□□□ -0.87
SMARCA2P51531 MIR6780A-201ENST00000615089 68 ntBASIC9.63□□□□□ -0.87
SMARCA2P51531 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC9.62□□□□□ -0.87
SMARCA2P51531 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC9.62□□□□□ -0.87
SMARCA2P51531 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SMARCA2P51531 ZNF840P-201ENST00000504759 1996 ntBASIC9.62□□□□□ -0.87
SMARCA2P51531 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC9.62□□□□□ -0.87
SMARCA2P51531 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC9.62□□□□□ -0.87
SMARCA2P51531 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC9.62□□□□□ -0.87
SMARCA2P51531 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SMARCA2P51531 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
SMARCA2P51531 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC9.62□□□□□ -0.87
SMARCA2P51531 RPL32P3-201ENST00000359025 275 ntBASIC9.62□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms