Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC079809.1-201ENST00000415468 276 ntBASIC5.81□□□□□ -1.48
SLC1A1P43005 AC127526.2-201ENST00000426436 775 ntBASIC5.81□□□□□ -1.48
SLC1A1P43005 TAAR4P-201ENST00000454843 1039 ntBASIC5.81□□□□□ -1.48
SLC1A1P43005 RPS23P6-201ENST00000466136 431 ntBASIC5.81□□□□□ -1.48
SLC1A1P43005 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.81□□□□□ -1.48
SLC1A1P43005 RN7SL583P-201ENST00000475692 287 ntBASIC5.81□□□□□ -1.48
SLC1A1P43005 AP000797.2-201ENST00000475768 606 ntBASIC5.81□□□□□ -1.48
SLC1A1P43005 AC114781.3-201ENST00000512083 142 ntBASIC5.81□□□□□ -1.48
SLC1A1P43005 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.81□□□□□ -1.48
SLC1A1P43005 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.81□□□□□ -1.48
SLC1A1P43005 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.81□□□□□ -1.48
SLC1A1P43005 AC068305.2-201ENST00000550567 1205 ntBASIC5.81□□□□□ -1.48
SLC1A1P43005 AC019322.1-201ENST00000571869 389 ntBASIC5.81□□□□□ -1.48
SLC1A1P43005 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
SLC1A1P43005 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.81□□□□□ -1.48
SLC1A1P43005 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.81□□□□□ -1.48
SLC1A1P43005 MIR7109-201ENST00000613748 65 ntBASIC5.81□□□□□ -1.48
SLC1A1P43005 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.81□□□□□ -1.48
SLC1A1P43005 AL596275.2-207ENST00000641188 675 ntBASIC5.81□□□□□ -1.48
SLC1A1P43005 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SLC1A1P43005 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.81□□□□□ -1.48
SLC1A1P43005 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SLC1A1P43005 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.81□□□□□ -1.48
SLC1A1P43005 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SLC1A1P43005 AC068870.3-201ENST00000625077 2536 ntBASIC5.81□□□□□ -1.48
SLC1A1P43005 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
SLC1A1P43005 AC139426.3-201ENST00000605648 2059 ntBASIC5.81□□□□□ -1.48
SLC1A1P43005 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
SLC1A1P43005 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SLC1A1P43005 AC100757.1-201ENST00000616872 1835 ntBASIC5.81□□□□□ -1.48
SLC1A1P43005 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
SLC1A1P43005 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.81□□□□□ -1.48
SLC1A1P43005 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.8□□□□□ -1.48
SLC1A1P43005 GVINP1-202ENST00000531871 7271 ntBASIC5.8□□□□□ -1.48
SLC1A1P43005 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
SLC1A1P43005 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SLC1A1P43005 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SLC1A1P43005 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SLC1A1P43005 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.8□□□□□ -1.48
SLC1A1P43005 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.8□□□□□ -1.48
SLC1A1P43005 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SLC1A1P43005 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.8□□□□□ -1.48
SLC1A1P43005 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SLC1A1P43005 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SLC1A1P43005 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
SLC1A1P43005 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SLC1A1P43005 MIR375-201ENST00000362103 64 ntBASIC5.8□□□□□ -1.48
SLC1A1P43005 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.8□□□□□ -1.48
SLC1A1P43005 AC113412.1-201ENST00000425840 504 ntBASIC5.8□□□□□ -1.48
SLC1A1P43005 AC110602.1-201ENST00000437414 318 ntBASIC5.8□□□□□ -1.48
SLC1A1P43005 AP002884.1-201ENST00000479691 655 ntBASIC5.8□□□□□ -1.48
SLC1A1P43005 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.8□□□□□ -1.48
SLC1A1P43005 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.8□□□□□ -1.48
SLC1A1P43005 AC021193.1-201ENST00000511607 420 ntBASIC5.8□□□□□ -1.48
SLC1A1P43005 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.8□□□□□ -1.48
SLC1A1P43005 LDHBP3-201ENST00000514909 822 ntBASIC5.8□□□□□ -1.48
SLC1A1P43005 Vault.2-201ENST00000516519 98 ntBASIC5.8□□□□□ -1.48
SLC1A1P43005 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.8□□□□□ -1.48
SLC1A1P43005 TRIM77BP-201ENST00000524985 1119 ntBASIC5.8□□□□□ -1.48
SLC1A1P43005 AP004609.2-201ENST00000532177 190 ntBASIC5.8□□□□□ -1.48
SLC1A1P43005 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.8□□□□□ -1.48
SLC1A1P43005 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.8□□□□□ -1.48
SLC1A1P43005 IGBP1P1-201ENST00000554337 1009 ntBASIC5.8□□□□□ -1.48
SLC1A1P43005 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.8□□□□□ -1.48
SLC1A1P43005 AC092121.1-201ENST00000569452 202 ntBASIC5.8□□□□□ -1.48
SLC1A1P43005 AC015802.2-201ENST00000589690 189 ntBASIC5.8□□□□□ -1.48
SLC1A1P43005 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SLC1A1P43005 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.8□□□□□ -1.48
SLC1A1P43005 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.8□□□□□ -1.48
SLC1A1P43005 AC048341.3-201ENST00000619323 491 ntBASIC5.8□□□□□ -1.48
SLC1A1P43005 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.8□□□□□ -1.48
SLC1A1P43005 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.8□□□□□ -1.48
SLC1A1P43005 FO681491.1-202ENST00000623392 737 ntBASIC5.8□□□□□ -1.48
SLC1A1P43005 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.8□□□□□ -1.48
SLC1A1P43005 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SLC1A1P43005 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.8□□□□□ -1.48
SLC1A1P43005 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
SLC1A1P43005 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
SLC1A1P43005 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SLC1A1P43005 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SLC1A1P43005 AC006600.2-201ENST00000624834 2506 ntBASIC5.8□□□□□ -1.48
SLC1A1P43005 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.8□□□□□ -1.48
SLC1A1P43005 AL022311.1-201ENST00000623726 19416 ntBASIC5.8□□□□□ -1.48
SLC1A1P43005 MRE11P1-201ENST00000464884 2127 ntBASIC5.8□□□□□ -1.48
SLC1A1P43005 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.8□□□□□ -1.48
SLC1A1P43005 AC005261.2-201ENST00000593427 4258 ntBASIC5.79□□□□□ -1.48
SLC1A1P43005 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SLC1A1P43005 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
SLC1A1P43005 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
SLC1A1P43005 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SLC1A1P43005 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.79□□□□□ -1.48
SLC1A1P43005 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.79□□□□□ -1.48
SLC1A1P43005 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SLC1A1P43005 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SLC1A1P43005 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SLC1A1P43005 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.79□□□□□ -1.48
SLC1A1P43005 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SLC1A1P43005 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.79□□□□□ -1.48
SLC1A1P43005 RN7SKP275-201ENST00000364626 301 ntBASIC5.79□□□□□ -1.48
SLC1A1P43005 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms