Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 Z84478.1-201ENST00000438230 1219 ntBASIC5.49□□□□□ -1.53
RORAP35398 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.49□□□□□ -1.53
RORAP35398 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.49□□□□□ -1.53
RORAP35398 FRG2FP-204ENST00000453982 852 ntBASIC5.49□□□□□ -1.53
RORAP35398 AC091544.1-201ENST00000484702 348 ntBASIC5.49□□□□□ -1.53
RORAP35398 RN7SL214P-201ENST00000487317 265 ntBASIC5.49□□□□□ -1.53
RORAP35398 TRBV5-2-201ENST00000489095 273 ntBASIC5.49□□□□□ -1.53
RORAP35398 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RORAP35398 AC009120.1-201ENST00000493458 473 ntBASIC5.49□□□□□ -1.53
RORAP35398 OR7E157P-201ENST00000494376 911 ntBASIC5.49□□□□□ -1.53
RORAP35398 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.49□□□□□ -1.53
RORAP35398 ATP5LP3-201ENST00000514223 304 ntBASIC5.49□□□□□ -1.53
RORAP35398 RNU6-615P-201ENST00000516065 106 ntBASIC5.49□□□□□ -1.53
RORAP35398 SCARNA6.1-201ENST00000516989 238 ntBASIC5.49□□□□□ -1.53
RORAP35398 SNORA43.3-201ENST00000517240 103 ntBASIC5.49□□□□□ -1.53
RORAP35398 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.49□□□□□ -1.53
RORAP35398 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.49□□□□□ -1.53
RORAP35398 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
RORAP35398 AC007225.2-201ENST00000562529 256 ntBASIC5.49□□□□□ -1.53
RORAP35398 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RORAP35398 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
RORAP35398 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.49□□□□□ -1.53
RORAP35398 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.49□□□□□ -1.53
RORAP35398 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.49□□□□□ -1.53
RORAP35398 AC006115.2-201ENST00000596823 202 ntBASIC5.49□□□□□ -1.53
RORAP35398 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.49□□□□□ -1.53
RORAP35398 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.49□□□□□ -1.53
RORAP35398 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.49□□□□□ -1.53
RORAP35398 AL691477.1-201ENST00000624398 162 ntBASIC5.49□□□□□ -1.53
RORAP35398 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC5.49□□□□□ -1.53
RORAP35398 AC000095.2-202ENST00000637415 154 ntBASIC5.49□□□□□ -1.53
RORAP35398 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
RORAP35398 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
RORAP35398 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
RORAP35398 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.49□□□□□ -1.53
RORAP35398 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.49□□□□□ -1.53
RORAP35398 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.49□□□□□ -1.53
RORAP35398 BCORP1-203ENST00000513194 5093 ntBASIC5.49□□□□□ -1.53
RORAP35398 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.49□□□□□ -1.53
RORAP35398 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RORAP35398 AC097063.1-201ENST00000426714 1797 ntBASIC5.49□□□□□ -1.53
RORAP35398 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.49□□□□□ -1.53
RORAP35398 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RORAP35398 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RORAP35398 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.49□□□□□ -1.53
RORAP35398 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.49□□□□□ -1.53
RORAP35398 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RORAP35398 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.49□□□□□ -1.53
RORAP35398 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.49□□□□□ -1.53
RORAP35398 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.49□□□□□ -1.53
RORAP35398 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RORAP35398 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
RORAP35398 AL022311.1-201ENST00000623726 19416 ntBASIC5.48□□□□□ -1.53
RORAP35398 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.48□□□□□ -1.53
RORAP35398 AC068870.3-201ENST00000625077 2536 ntBASIC5.48□□□□□ -1.53
RORAP35398 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
RORAP35398 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RORAP35398 AC239868.2-201ENST00000564237 4527 ntBASIC5.48□□□□□ -1.53
RORAP35398 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RORAP35398 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.48□□□□□ -1.53
RORAP35398 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RORAP35398 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RORAP35398 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RORAP35398 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.48□□□□□ -1.53
RORAP35398 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RORAP35398 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.48□□□□□ -1.53
RORAP35398 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RORAP35398 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.48□□□□□ -1.53
RORAP35398 RNA5SP132-201ENST00000364725 118 ntBASIC5.48□□□□□ -1.53
RORAP35398 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RORAP35398 AL391422.1-201ENST00000402155 436 ntBASIC5.48□□□□□ -1.53
RORAP35398 OR3A2-201ENST00000408891 1076 ntBASIC5.48□□□□□ -1.53
RORAP35398 Z68694.1-201ENST00000413929 841 ntBASIC5.48□□□□□ -1.53
RORAP35398 AC019205.1-201ENST00000421830 730 ntBASIC5.48□□□□□ -1.53
RORAP35398 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.48□□□□□ -1.53
RORAP35398 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.48□□□□□ -1.53
RORAP35398 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.48□□□□□ -1.53
RORAP35398 EEF1B2P6-201ENST00000445713 673 ntBASIC5.48□□□□□ -1.53
RORAP35398 RNU1-88P-201ENST00000459274 128 ntBASIC5.48□□□□□ -1.53
RORAP35398 RPS26P39-201ENST00000469206 341 ntBASIC5.48□□□□□ -1.53
RORAP35398 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.48□□□□□ -1.53
RORAP35398 RN7SL177P-201ENST00000476596 299 ntBASIC5.48□□□□□ -1.53
RORAP35398 AC079080.1-201ENST00000479841 822 ntBASIC5.48□□□□□ -1.53
RORAP35398 AC017007.3-201ENST00000479865 435 ntBASIC5.48□□□□□ -1.53
RORAP35398 DEFB109A-201ENST00000482450 265 ntBASIC5.48□□□□□ -1.53
RORAP35398 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RORAP35398 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.48□□□□□ -1.53
RORAP35398 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.48□□□□□ -1.53
RORAP35398 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RORAP35398 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
RORAP35398 MRPS16P1-201ENST00000523462 412 ntBASIC5.48□□□□□ -1.53
RORAP35398 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.48□□□□□ -1.53
RORAP35398 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.48□□□□□ -1.53
RORAP35398 AL121594.2-201ENST00000541658 472 ntBASIC5.48□□□□□ -1.53
RORAP35398 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.48□□□□□ -1.53
RORAP35398 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.48□□□□□ -1.53
RORAP35398 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.48□□□□□ -1.53
RORAP35398 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.48□□□□□ -1.53
RORAP35398 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.48□□□□□ -1.53
RORAP35398 AL139041.1-201ENST00000605480 610 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms