Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 AL022331.1-201ENST00000429025 477 ntBASIC4.91□□□□□ -1.62
USF1P22415 HMGB3P24-201ENST00000433260 622 ntBASIC4.91□□□□□ -1.62
USF1P22415 SPRYD7P1-201ENST00000443861 570 ntBASIC4.91□□□□□ -1.62
USF1P22415 EEF1B2P6-201ENST00000445713 673 ntBASIC4.91□□□□□ -1.62
USF1P22415 AL162739.1-201ENST00000450606 307 ntBASIC4.91□□□□□ -1.62
USF1P22415 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC4.91□□□□□ -1.62
USF1P22415 RNU7-157P-201ENST00000459600 66 ntBASIC4.91□□□□□ -1.62
USF1P22415 SIAH1P1-201ENST00000479411 923 ntBASIC4.91□□□□□ -1.62
USF1P22415 OR7E157P-201ENST00000494376 911 ntBASIC4.91□□□□□ -1.62
USF1P22415 AC108693.1-201ENST00000496068 432 ntBASIC4.91□□□□□ -1.62
USF1P22415 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC4.91□□□□□ -1.62
USF1P22415 DUTP7-201ENST00000507982 486 ntBASIC4.91□□□□□ -1.62
USF1P22415 SNORA43.3-201ENST00000517240 103 ntBASIC4.91□□□□□ -1.62
USF1P22415 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC4.91□□□□□ -1.62
USF1P22415 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.91□□□□□ -1.62
USF1P22415 NPM1P5-201ENST00000557228 838 ntBASIC4.91□□□□□ -1.62
USF1P22415 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC4.91□□□□□ -1.62
USF1P22415 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC4.91□□□□□ -1.62
USF1P22415 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC4.91□□□□□ -1.62
USF1P22415 AC145423.1-201ENST00000605712 336 ntBASIC4.91□□□□□ -1.62
USF1P22415 AC211433.2-201ENST00000608433 387 ntBASIC4.91□□□□□ -1.62
USF1P22415 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC4.91□□□□□ -1.62
USF1P22415 AC093388.1-201ENST00000609166 430 ntBASIC4.91□□□□□ -1.62
USF1P22415 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.91□□□□□ -1.62
USF1P22415 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.91□□□□□ -1.62
USF1P22415 AL035661.1-201ENST00000620459 1144 ntBASIC4.91□□□□□ -1.62
USF1P22415 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.91□□□□□ -1.62
USF1P22415 ATM-229ENST00000639953 587 ntTSL 5 BASIC4.91□□□□□ -1.62
USF1P22415 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
USF1P22415 AC022164.1-201ENST00000568767 2673 ntBASIC4.91□□□□□ -1.62
USF1P22415 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC4.91□□□□□ -1.62
USF1P22415 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
USF1P22415 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
USF1P22415 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
USF1P22415 AC097063.1-201ENST00000426714 1797 ntBASIC4.91□□□□□ -1.62
USF1P22415 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
USF1P22415 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
USF1P22415 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC4.91□□□□□ -1.62
USF1P22415 AC016583.1-201ENST00000624221 2431 ntBASIC4.91□□□□□ -1.62
USF1P22415 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
USF1P22415 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC4.9□□□□□ -1.62
USF1P22415 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
USF1P22415 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
USF1P22415 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC4.9□□□□□ -1.62
USF1P22415 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
USF1P22415 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
USF1P22415 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
USF1P22415 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC4.9□□□□□ -1.63
USF1P22415 RN7SKP29-201ENST00000410957 272 ntBASIC4.9□□□□□ -1.63
USF1P22415 RN7SKP17-201ENST00000411242 351 ntBASIC4.9□□□□□ -1.63
USF1P22415 NPM1P4-201ENST00000414095 812 ntBASIC4.9□□□□□ -1.63
USF1P22415 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC4.9□□□□□ -1.63
USF1P22415 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.9□□□□□ -1.63
USF1P22415 DEFA9P-201ENST00000433042 285 ntBASIC4.9□□□□□ -1.63
USF1P22415 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC4.9□□□□□ -1.63
USF1P22415 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.9□□□□□ -1.63
USF1P22415 AL133445.1-201ENST00000467051 452 ntBASIC4.9□□□□□ -1.63
USF1P22415 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC4.9□□□□□ -1.63
USF1P22415 AC006539.1-201ENST00000481419 501 ntBASIC4.9□□□□□ -1.63
USF1P22415 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC4.9□□□□□ -1.63
USF1P22415 CCDC11P1-201ENST00000503137 1162 ntBASIC4.9□□□□□ -1.63
USF1P22415 AC111000.5-201ENST00000506559 1178 ntBASIC4.9□□□□□ -1.63
USF1P22415 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC4.9□□□□□ -1.63
USF1P22415 RNU6-615P-201ENST00000516065 106 ntBASIC4.9□□□□□ -1.63
USF1P22415 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
USF1P22415 AC020937.1-201ENST00000519677 1013 ntBASIC4.9□□□□□ -1.63
USF1P22415 HMGB1P42-201ENST00000532126 553 ntBASIC4.9□□□□□ -1.63
USF1P22415 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC4.9□□□□□ -1.63
USF1P22415 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
USF1P22415 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC4.9□□□□□ -1.63
USF1P22415 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC4.9□□□□□ -1.63
USF1P22415 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
USF1P22415 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC4.9□□□□□ -1.63
USF1P22415 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC4.9□□□□□ -1.63
USF1P22415 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC4.9□□□□□ -1.63
USF1P22415 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC4.9□□□□□ -1.63
USF1P22415 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.9□□□□□ -1.63
USF1P22415 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.9□□□□□ -1.63
USF1P22415 GMFG-212ENST00000602185 423 ntTSL 3 BASIC4.9□□□□□ -1.63
USF1P22415 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC4.9□□□□□ -1.63
USF1P22415 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC4.9□□□□□ -1.63
USF1P22415 AC008115.3-201ENST00000614874 549 ntBASIC4.9□□□□□ -1.63
USF1P22415 AC007683.2-201ENST00000624681 714 ntBASIC4.9□□□□□ -1.63
USF1P22415 AC239868.2-201ENST00000564237 4527 ntBASIC4.9□□□□□ -1.63
USF1P22415 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC4.9□□□□□ -1.63
USF1P22415 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
USF1P22415 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
USF1P22415 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
USF1P22415 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC4.9□□□□□ -1.63
USF1P22415 LINC02019-201ENST00000608605 2060 ntBASIC4.9□□□□□ -1.63
USF1P22415 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
USF1P22415 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
USF1P22415 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC4.9□□□□□ -1.63
USF1P22415 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
USF1P22415 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC4.89□□□□□ -1.63
USF1P22415 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
USF1P22415 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
USF1P22415 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
USF1P22415 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
USF1P22415 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms