Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC7.75□□□□□ -1.17
ERCC3P19447 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
ERCC3P19447 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
ERCC3P19447 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
ERCC3P19447 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
ERCC3P19447 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC7.75□□□□□ -1.17
ERCC3P19447 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC7.75□□□□□ -1.17
ERCC3P19447 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
ERCC3P19447 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC7.75□□□□□ -1.17
ERCC3P19447 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC7.75□□□□□ -1.17
ERCC3P19447 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
ERCC3P19447 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC7.74□□□□□ -1.17
ERCC3P19447 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
ERCC3P19447 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
ERCC3P19447 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
ERCC3P19447 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC7.74□□□□□ -1.17
ERCC3P19447 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
ERCC3P19447 OR5H2-201ENST00000355273 945 ntBASIC7.74□□□□□ -1.17
ERCC3P19447 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
ERCC3P19447 RNA5SP279-201ENST00000365513 117 ntBASIC7.74□□□□□ -1.17
ERCC3P19447 U3.52-201ENST00000384034 216 ntBASIC7.74□□□□□ -1.17
ERCC3P19447 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
ERCC3P19447 PRELID1P1-201ENST00000403549 660 ntBASIC7.74□□□□□ -1.17
ERCC3P19447 MIR1204-201ENST00000408388 67 ntBASIC7.74□□□□□ -1.17
ERCC3P19447 RPS7P12-201ENST00000422385 582 ntBASIC7.74□□□□□ -1.17
ERCC3P19447 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC7.74□□□□□ -1.17
ERCC3P19447 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC7.74□□□□□ -1.17
ERCC3P19447 ARL5AP2-201ENST00000444698 533 ntBASIC7.74□□□□□ -1.17
ERCC3P19447 AL133217.1-201ENST00000450980 425 ntBASIC7.74□□□□□ -1.17
ERCC3P19447 RANP1-206ENST00000455094 651 ntBASIC7.74□□□□□ -1.17
ERCC3P19447 RPS27AP2-201ENST00000457576 465 ntBASIC7.74□□□□□ -1.17
ERCC3P19447 AC010468.1-201ENST00000461022 817 ntBASIC7.74□□□□□ -1.17
ERCC3P19447 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC7.74□□□□□ -1.17
ERCC3P19447 SCG5-207ENST00000497208 949 ntTSL 5 BASIC7.74□□□□□ -1.17
ERCC3P19447 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC7.74□□□□□ -1.17
ERCC3P19447 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC7.74□□□□□ -1.17
ERCC3P19447 AC112484.3-201ENST00000505910 329 ntBASIC7.74□□□□□ -1.17
ERCC3P19447 AL390198.2-201ENST00000510553 222 ntBASIC7.74□□□□□ -1.17
ERCC3P19447 AC018797.1-201ENST00000510791 255 ntBASIC7.74□□□□□ -1.17
ERCC3P19447 MAST4-IT1-201ENST00000514241 658 ntBASIC7.74□□□□□ -1.17
ERCC3P19447 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
ERCC3P19447 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC7.74□□□□□ -1.17
ERCC3P19447 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC7.74□□□□□ -1.17
ERCC3P19447 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC7.74□□□□□ -1.17
ERCC3P19447 AL589765.6-201ENST00000601909 549 ntBASIC7.74□□□□□ -1.17
ERCC3P19447 HIRAP1-201ENST00000605318 787 ntBASIC7.74□□□□□ -1.17
ERCC3P19447 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC7.74□□□□□ -1.17
ERCC3P19447 STMN1P1-201ENST00000617809 440 ntBASIC7.74□□□□□ -1.17
ERCC3P19447 SNX18P10-201ENST00000625014 519 ntBASIC7.74□□□□□ -1.17
ERCC3P19447 AC068137.4-201ENST00000638485 296 ntBASIC7.74□□□□□ -1.17
ERCC3P19447 OR8B1P-202ENST00000641132 1178 ntBASIC7.74□□□□□ -1.17
ERCC3P19447 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC7.74□□□□□ -1.17
ERCC3P19447 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
ERCC3P19447 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC7.74□□□□□ -1.17
ERCC3P19447 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
ERCC3P19447 AL591848.4-201ENST00000567832 3472 ntBASIC7.74□□□□□ -1.17
ERCC3P19447 LPAL2-203ENST00000454031 2498 ntBASIC7.74□□□□□ -1.17
ERCC3P19447 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC7.74□□□□□ -1.17
ERCC3P19447 LINC01613-201ENST00000561476 2780 ntBASIC7.74□□□□□ -1.17
ERCC3P19447 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC7.74□□□□□ -1.17
ERCC3P19447 ALB-214ENST00000509063 1911 ntTSL 5 BASIC7.74□□□□□ -1.17
ERCC3P19447 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
ERCC3P19447 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
ERCC3P19447 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
ERCC3P19447 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
ERCC3P19447 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
ERCC3P19447 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
ERCC3P19447 BX005019.1-201ENST00000561881 1810 ntBASIC7.73□□□□□ -1.17
ERCC3P19447 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
ERCC3P19447 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC7.73□□□□□ -1.17
ERCC3P19447 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
ERCC3P19447 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
ERCC3P19447 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
ERCC3P19447 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
ERCC3P19447 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC7.73□□□□□ -1.17
ERCC3P19447 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
ERCC3P19447 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
ERCC3P19447 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
ERCC3P19447 RNU1-87P-201ENST00000363727 170 ntBASIC7.73□□□□□ -1.17
ERCC3P19447 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
ERCC3P19447 AL445238.1-204ENST00000400311 463 ntBASIC7.73□□□□□ -1.17
ERCC3P19447 TCEA1P4-201ENST00000415066 844 ntBASIC7.73□□□□□ -1.17
ERCC3P19447 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC7.73□□□□□ -1.17
ERCC3P19447 ELOCP9-201ENST00000418624 239 ntBASIC7.73□□□□□ -1.17
ERCC3P19447 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC7.73□□□□□ -1.17
ERCC3P19447 MFSD13B-201ENST00000420133 1290 ntBASIC7.73□□□□□ -1.17
ERCC3P19447 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC7.73□□□□□ -1.17
ERCC3P19447 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC7.73□□□□□ -1.17
ERCC3P19447 HMGB3P10-201ENST00000434734 572 ntBASIC7.73□□□□□ -1.17
ERCC3P19447 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC7.73□□□□□ -1.17
ERCC3P19447 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC7.73□□□□□ -1.17
ERCC3P19447 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC7.73□□□□□ -1.17
ERCC3P19447 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC7.73□□□□□ -1.17
ERCC3P19447 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC7.73□□□□□ -1.17
ERCC3P19447 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC7.73□□□□□ -1.17
ERCC3P19447 AC084024.2-201ENST00000503480 791 ntBASIC7.73□□□□□ -1.17
ERCC3P19447 PABPC1P1-201ENST00000506347 591 ntBASIC7.73□□□□□ -1.17
ERCC3P19447 AC113347.3-201ENST00000509113 148 ntBASIC7.73□□□□□ -1.17
ERCC3P19447 RNU5A-4P-201ENST00000516588 111 ntBASIC7.73□□□□□ -1.17
ERCC3P19447 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC7.73□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms