Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC4.89□□□□□ -1.63
CTLA4P16410 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CTLA4P16410 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
CTLA4P16410 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CTLA4P16410 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC4.89□□□□□ -1.63
CTLA4P16410 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC4.89□□□□□ -1.63
CTLA4P16410 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
CTLA4P16410 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CTLA4P16410 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
CTLA4P16410 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CTLA4P16410 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
CTLA4P16410 AC114786.1-201ENST00000512892 1415 ntBASIC4.89□□□□□ -1.63
CTLA4P16410 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.89□□□□□ -1.63
CTLA4P16410 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC4.88□□□□□ -1.63
CTLA4P16410 RPS2P45-201ENST00000469997 2057 ntBASIC4.88□□□□□ -1.63
CTLA4P16410 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CTLA4P16410 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC4.88□□□□□ -1.63
CTLA4P16410 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
CTLA4P16410 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CTLA4P16410 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CTLA4P16410 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
CTLA4P16410 AL592429.1-201ENST00000403909 1473 ntBASIC4.88□□□□□ -1.63
CTLA4P16410 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
CTLA4P16410 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CTLA4P16410 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.88□□□□□ -1.63
CTLA4P16410 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CTLA4P16410 AL132656.3-201ENST00000606384 1595 ntBASIC4.88□□□□□ -1.63
CTLA4P16410 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC4.88□□□□□ -1.63
CTLA4P16410 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.88□□□□□ -1.63
CTLA4P16410 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CTLA4P16410 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC4.88□□□□□ -1.63
CTLA4P16410 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CTLA4P16410 PPCS-201ENST00000372556 984 ntTSL 2 BASIC4.88□□□□□ -1.63
CTLA4P16410 HMGN1P20-201ENST00000411849 300 ntBASIC4.88□□□□□ -1.63
CTLA4P16410 AC017078.1-201ENST00000416146 368 ntBASIC4.88□□□□□ -1.63
CTLA4P16410 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC4.88□□□□□ -1.63
CTLA4P16410 AL662874.1-201ENST00000426065 230 ntBASIC4.88□□□□□ -1.63
CTLA4P16410 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.88□□□□□ -1.63
CTLA4P16410 AC092106.1-201ENST00000444291 373 ntBASIC4.88□□□□□ -1.63
CTLA4P16410 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
CTLA4P16410 LRRC37A14P-201ENST00000452297 462 ntBASIC4.88□□□□□ -1.63
CTLA4P16410 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC4.88□□□□□ -1.63
CTLA4P16410 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC4.88□□□□□ -1.63
CTLA4P16410 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC4.88□□□□□ -1.63
CTLA4P16410 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC4.88□□□□□ -1.63
CTLA4P16410 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.88□□□□□ -1.63
CTLA4P16410 IGKV2-4-201ENST00000523070 340 ntBASIC4.88□□□□□ -1.63
CTLA4P16410 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.88□□□□□ -1.63
CTLA4P16410 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.88□□□□□ -1.63
CTLA4P16410 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC4.88□□□□□ -1.63
CTLA4P16410 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.88□□□□□ -1.63
CTLA4P16410 MRPS21P7-201ENST00000566937 238 ntBASIC4.88□□□□□ -1.63
CTLA4P16410 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
CTLA4P16410 AP005403.1-201ENST00000579720 229 ntBASIC4.88□□□□□ -1.63
CTLA4P16410 MIR7853-201ENST00000584820 132 ntBASIC4.88□□□□□ -1.63
CTLA4P16410 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC4.88□□□□□ -1.63
CTLA4P16410 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC4.88□□□□□ -1.63
CTLA4P16410 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.88□□□□□ -1.63
CTLA4P16410 PPATP2-201ENST00000605635 508 ntBASIC4.88□□□□□ -1.63
CTLA4P16410 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.88□□□□□ -1.63
CTLA4P16410 AP001029.2-203ENST00000589795 4910 ntBASIC4.88□□□□□ -1.63
CTLA4P16410 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CTLA4P16410 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
CTLA4P16410 AC003973.3-201ENST00000624863 2822 ntBASIC4.88□□□□□ -1.63
CTLA4P16410 RALGAPA1P1-201ENST00000443361 6232 ntBASIC4.88□□□□□ -1.63
CTLA4P16410 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CTLA4P16410 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CTLA4P16410 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CTLA4P16410 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CTLA4P16410 RMST-209ENST00000639542 3269 ntTSL 5 BASIC4.88□□□□□ -1.63
CTLA4P16410 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CTLA4P16410 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC4.88□□□□□ -1.63
CTLA4P16410 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CTLA4P16410 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.88□□□□□ -1.63
CTLA4P16410 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CTLA4P16410 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC4.88□□□□□ -1.63
CTLA4P16410 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CTLA4P16410 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
CTLA4P16410 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CTLA4P16410 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CTLA4P16410 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CTLA4P16410 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CTLA4P16410 YES1P1-201ENST00000418510 1628 ntBASIC4.87□□□□□ -1.63
CTLA4P16410 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CTLA4P16410 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CTLA4P16410 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CTLA4P16410 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC4.87□□□□□ -1.63
CTLA4P16410 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CTLA4P16410 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CTLA4P16410 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CTLA4P16410 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC4.87□□□□□ -1.63
CTLA4P16410 SLC20A1P1-201ENST00000413906 956 ntBASIC4.87□□□□□ -1.63
CTLA4P16410 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC4.87□□□□□ -1.63
CTLA4P16410 AC093155.2-201ENST00000420734 937 ntBASIC4.87□□□□□ -1.63
CTLA4P16410 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC4.87□□□□□ -1.63
CTLA4P16410 AL133173.1-201ENST00000423458 397 ntBASIC4.87□□□□□ -1.63
CTLA4P16410 SETP9-201ENST00000423837 832 ntBASIC4.87□□□□□ -1.63
CTLA4P16410 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CTLA4P16410 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC4.87□□□□□ -1.63
CTLA4P16410 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms