Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC5.23□□□□□ -1.57
NCK1P16333 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.23□□□□□ -1.57
NCK1P16333 AL034379.1-201ENST00000423216 253 ntBASIC5.23□□□□□ -1.57
NCK1P16333 HMGN2P27-201ENST00000427352 270 ntBASIC5.23□□□□□ -1.57
NCK1P16333 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC5.23□□□□□ -1.57
NCK1P16333 AC126120.1-201ENST00000431082 470 ntBASIC5.23□□□□□ -1.57
NCK1P16333 TUBB4BP6-201ENST00000437576 479 ntBASIC5.23□□□□□ -1.57
NCK1P16333 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.23□□□□□ -1.57
NCK1P16333 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.23□□□□□ -1.57
NCK1P16333 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.23□□□□□ -1.57
NCK1P16333 AL596266.1-201ENST00000448132 400 ntBASIC5.23□□□□□ -1.57
NCK1P16333 HMGB1P7-201ENST00000450921 612 ntBASIC5.23□□□□□ -1.57
NCK1P16333 AC009120.1-201ENST00000493458 473 ntBASIC5.23□□□□□ -1.57
NCK1P16333 AC106822.1-201ENST00000502647 526 ntBASIC5.23□□□□□ -1.57
NCK1P16333 IGBP1P4-201ENST00000503202 879 ntBASIC5.23□□□□□ -1.57
NCK1P16333 AC113367.2-201ENST00000505749 160 ntBASIC5.23□□□□□ -1.57
NCK1P16333 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.23□□□□□ -1.57
NCK1P16333 AC021678.3-201ENST00000517893 476 ntBASIC5.23□□□□□ -1.57
NCK1P16333 IGKV3D-25-201ENST00000519599 235 ntBASIC5.23□□□□□ -1.57
NCK1P16333 AC138832.1-201ENST00000522871 556 ntBASIC5.23□□□□□ -1.57
NCK1P16333 WBP1LP3-201ENST00000523033 208 ntBASIC5.23□□□□□ -1.57
NCK1P16333 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.23□□□□□ -1.57
NCK1P16333 AC025423.2-201ENST00000537570 439 ntBASIC5.23□□□□□ -1.57
NCK1P16333 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.23□□□□□ -1.57
NCK1P16333 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC5.23□□□□□ -1.57
NCK1P16333 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.23□□□□□ -1.57
NCK1P16333 MT1CP-201ENST00000567054 174 ntBASIC5.23□□□□□ -1.57
NCK1P16333 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.23□□□□□ -1.57
NCK1P16333 MIR744-201ENST00000578242 98 ntBASIC5.23□□□□□ -1.57
NCK1P16333 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.23□□□□□ -1.57
NCK1P16333 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.23□□□□□ -1.57
NCK1P16333 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.23□□□□□ -1.57
NCK1P16333 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.23□□□□□ -1.57
NCK1P16333 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.23□□□□□ -1.57
NCK1P16333 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.23□□□□□ -1.57
NCK1P16333 AC022919.1-201ENST00000624979 626 ntBASIC5.23□□□□□ -1.57
NCK1P16333 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.23□□□□□ -1.57
NCK1P16333 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.23□□□□□ -1.57
NCK1P16333 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
NCK1P16333 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.23□□□□□ -1.57
NCK1P16333 Z83820.1-201ENST00000456978 1499 ntBASIC5.23□□□□□ -1.57
NCK1P16333 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
NCK1P16333 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
NCK1P16333 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
NCK1P16333 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.23□□□□□ -1.57
NCK1P16333 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.23□□□□□ -1.57
NCK1P16333 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.23□□□□□ -1.57
NCK1P16333 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NCK1P16333 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
NCK1P16333 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
NCK1P16333 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.22□□□□□ -1.57
NCK1P16333 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
NCK1P16333 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.22□□□□□ -1.57
NCK1P16333 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
NCK1P16333 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
NCK1P16333 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
NCK1P16333 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.22□□□□□ -1.57
NCK1P16333 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.22□□□□□ -1.57
NCK1P16333 AC123912.3-201ENST00000600907 1367 ntBASIC5.22□□□□□ -1.57
NCK1P16333 U3.7-201ENST00000363668 216 ntBASIC5.22□□□□□ -1.57
NCK1P16333 RNA5SP279-201ENST00000365513 117 ntBASIC5.22□□□□□ -1.57
NCK1P16333 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
NCK1P16333 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
NCK1P16333 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.22□□□□□ -1.57
NCK1P16333 OR52E3P-201ENST00000452083 936 ntBASIC5.22□□□□□ -1.57
NCK1P16333 CTSLP6-201ENST00000458273 1002 ntBASIC5.22□□□□□ -1.57
NCK1P16333 RPSAP37-201ENST00000470913 821 ntBASIC5.22□□□□□ -1.57
NCK1P16333 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC5.22□□□□□ -1.57
NCK1P16333 AC091544.1-201ENST00000484702 348 ntBASIC5.22□□□□□ -1.57
NCK1P16333 AC112484.3-201ENST00000505910 329 ntBASIC5.22□□□□□ -1.57
NCK1P16333 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.22□□□□□ -1.57
NCK1P16333 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.22□□□□□ -1.57
NCK1P16333 SNORA70.11-201ENST00000515987 138 ntBASIC5.22□□□□□ -1.57
NCK1P16333 SNORA70.13-201ENST00000516116 138 ntBASIC5.22□□□□□ -1.57
NCK1P16333 SCARNA6.1-201ENST00000516989 238 ntBASIC5.22□□□□□ -1.57
NCK1P16333 AC113191.1-201ENST00000517759 403 ntBASIC5.22□□□□□ -1.57
NCK1P16333 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.22□□□□□ -1.57
NCK1P16333 PCNAP4-201ENST00000532690 730 ntBASIC5.22□□□□□ -1.57
NCK1P16333 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.22□□□□□ -1.57
NCK1P16333 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
NCK1P16333 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.22□□□□□ -1.57
NCK1P16333 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC5.22□□□□□ -1.57
NCK1P16333 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC5.22□□□□□ -1.57
NCK1P16333 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC5.22□□□□□ -1.57
NCK1P16333 AC108673.3-201ENST00000609183 335 ntBASIC5.22□□□□□ -1.57
NCK1P16333 AC008833.1-201ENST00000611633 691 ntBASIC5.22□□□□□ -1.57
NCK1P16333 AL356752.1-201ENST00000615844 593 ntBASIC5.22□□□□□ -1.57
NCK1P16333 TEX41-279ENST00000629149 609 ntTSL 5 BASIC5.22□□□□□ -1.57
NCK1P16333 RFC1-217ENST00000639695 867 ntTSL 5 BASIC5.22□□□□□ -1.57
NCK1P16333 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.22□□□□□ -1.57
NCK1P16333 AC138627.1-204ENST00000641894 765 ntBASIC5.22□□□□□ -1.57
NCK1P16333 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
NCK1P16333 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
NCK1P16333 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.22□□□□□ -1.57
NCK1P16333 AL450345.1-202ENST00000605741 3881 ntBASIC5.22□□□□□ -1.57
NCK1P16333 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
NCK1P16333 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
NCK1P16333 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.21□□□□□ -1.57
NCK1P16333 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
NCK1P16333 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms