Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.87□□□□□ -1.47
RETP07949 RPL15P21-201ENST00000495592 567 ntBASIC5.87□□□□□ -1.47
RETP07949 AC008629.2-201ENST00000503783 483 ntBASIC5.87□□□□□ -1.47
RETP07949 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.87□□□□□ -1.47
RETP07949 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.87□□□□□ -1.47
RETP07949 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.87□□□□□ -1.47
RETP07949 RN7SL708P-201ENST00000580952 299 ntBASIC5.87□□□□□ -1.47
RETP07949 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.87□□□□□ -1.47
RETP07949 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.87□□□□□ -1.47
RETP07949 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
RETP07949 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.87□□□□□ -1.47
RETP07949 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.87□□□□□ -1.47
RETP07949 MIR8080-201ENST00000622224 89 ntBASIC5.87□□□□□ -1.47
RETP07949 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.87□□□□□ -1.47
RETP07949 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RETP07949 YES1P1-201ENST00000418510 1628 ntBASIC5.87□□□□□ -1.47
RETP07949 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.87□□□□□ -1.47
RETP07949 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RETP07949 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
RETP07949 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.87□□□□□ -1.47
RETP07949 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RETP07949 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RETP07949 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RETP07949 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RETP07949 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RETP07949 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
RETP07949 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RETP07949 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
RETP07949 ICE2P1-201ENST00000512800 1849 ntBASIC5.86□□□□□ -1.47
RETP07949 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.86□□□□□ -1.47
RETP07949 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
RETP07949 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.86□□□□□ -1.47
RETP07949 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
RETP07949 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RETP07949 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.86□□□□□ -1.47
RETP07949 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.86□□□□□ -1.47
RETP07949 SLC35E1P1-201ENST00000419313 864 ntBASIC5.86□□□□□ -1.47
RETP07949 RPL21P133-201ENST00000443666 476 ntBASIC5.86□□□□□ -1.47
RETP07949 FTH1P2-201ENST00000466086 412 ntBASIC5.86□□□□□ -1.47
RETP07949 EIF1P7-201ENST00000487533 337 ntBASIC5.86□□□□□ -1.47
RETP07949 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.86□□□□□ -1.47
RETP07949 AC020937.1-201ENST00000519677 1013 ntBASIC5.86□□□□□ -1.47
RETP07949 NRBF2P4-201ENST00000520874 850 ntBASIC5.86□□□□□ -1.47
RETP07949 OR5D15P-201ENST00000531671 942 ntBASIC5.86□□□□□ -1.47
RETP07949 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.86□□□□□ -1.47
RETP07949 AL049779.3-201ENST00000557141 606 ntBASIC5.86□□□□□ -1.47
RETP07949 NPM1P42-201ENST00000560329 862 ntBASIC5.86□□□□□ -1.47
RETP07949 AC010245.2-201ENST00000606908 1167 ntBASIC5.86□□□□□ -1.47
RETP07949 AL445222.1-201ENST00000607259 628 ntBASIC5.86□□□□□ -1.47
RETP07949 AL049539.1-201ENST00000611964 459 ntBASIC5.86□□□□□ -1.47
RETP07949 AC090510.2-201ENST00000617465 629 ntBASIC5.86□□□□□ -1.47
RETP07949 AL137067.2-201ENST00000621202 131 ntBASIC5.86□□□□□ -1.47
RETP07949 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.86□□□□□ -1.47
RETP07949 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.86□□□□□ -1.47
RETP07949 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RETP07949 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RETP07949 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.86□□□□□ -1.47
RETP07949 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.86□□□□□ -1.47
RETP07949 AL359091.1-201ENST00000449048 1734 ntBASIC5.85□□□□□ -1.47
RETP07949 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RETP07949 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RETP07949 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.85□□□□□ -1.47
RETP07949 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
RETP07949 AP005432.1-201ENST00000580891 3485 ntBASIC5.85□□□□□ -1.47
RETP07949 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
RETP07949 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RETP07949 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
RETP07949 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.85□□□□□ -1.47
RETP07949 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.85□□□□□ -1.47
RETP07949 AC005042.1-201ENST00000393397 800 ntBASIC5.85□□□□□ -1.47
RETP07949 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.85□□□□□ -1.47
RETP07949 AL645733.1-201ENST00000402250 217 ntBASIC5.85□□□□□ -1.47
RETP07949 AL139128.1-201ENST00000413921 941 ntBASIC5.85□□□□□ -1.47
RETP07949 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.85□□□□□ -1.47
RETP07949 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.85□□□□□ -1.47
RETP07949 AL590762.4-201ENST00000425885 253 ntBASIC5.85□□□□□ -1.47
RETP07949 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.85□□□□□ -1.47
RETP07949 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.85□□□□□ -1.47
RETP07949 AL731534.1-201ENST00000434711 269 ntBASIC5.85□□□□□ -1.47
RETP07949 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.85□□□□□ -1.47
RETP07949 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.85□□□□□ -1.47
RETP07949 RPL7AP6-201ENST00000477943 801 ntBASIC5.85□□□□□ -1.47
RETP07949 RN7SL808P-201ENST00000496066 299 ntBASIC5.85□□□□□ -1.47
RETP07949 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RETP07949 RNA5SP228-201ENST00000516232 133 ntBASIC5.85□□□□□ -1.47
RETP07949 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.85□□□□□ -1.47
RETP07949 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RETP07949 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.85□□□□□ -1.47
RETP07949 AP002884.5-201ENST00000595053 1132 ntBASIC5.85□□□□□ -1.47
RETP07949 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.85□□□□□ -1.47
RETP07949 AL139099.4-201ENST00000614802 114 ntBASIC5.85□□□□□ -1.47
RETP07949 AC099654.11-201ENST00000638857 294 ntBASIC5.85□□□□□ -1.47
RETP07949 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RETP07949 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RETP07949 PROS2P-201ENST00000474651 1951 ntBASIC5.85□□□□□ -1.47
RETP07949 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
RETP07949 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RETP07949 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RETP07949 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.85□□□□□ -1.47
RETP07949 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms