Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 RPL17P2-201ENST00000491913 451 ntBASIC6.2□□□□□ -1.42
RB1P06400 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC6.2□□□□□ -1.42
RB1P06400 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.2□□□□□ -1.42
RB1P06400 EIF4A2P5-201ENST00000529914 499 ntBASIC6.2□□□□□ -1.42
RB1P06400 HMGN2P6-201ENST00000551091 273 ntBASIC6.2□□□□□ -1.42
RB1P06400 AL049779.2-201ENST00000553847 315 ntBASIC6.2□□□□□ -1.42
RB1P06400 NPM1P5-201ENST00000557228 838 ntBASIC6.2□□□□□ -1.42
RB1P06400 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC6.2□□□□□ -1.42
RB1P06400 AC011497.2-201ENST00000600255 639 ntBASIC6.2□□□□□ -1.42
RB1P06400 AL121612.2-201ENST00000612261 482 ntBASIC6.2□□□□□ -1.42
RB1P06400 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC6.2□□□□□ -1.42
RB1P06400 RPSAP73-201ENST00000614820 330 ntBASIC6.2□□□□□ -1.42
RB1P06400 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.2□□□□□ -1.42
RB1P06400 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC6.2□□□□□ -1.42
RB1P06400 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RB1P06400 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC6.2□□□□□ -1.42
RB1P06400 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.2□□□□□ -1.42
RB1P06400 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RB1P06400 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.2□□□□□ -1.42
RB1P06400 AC034229.2-201ENST00000566945 2508 ntBASIC6.2□□□□□ -1.42
RB1P06400 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC6.2□□□□□ -1.42
RB1P06400 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RB1P06400 CYP4Z2P-201ENST00000423332 1512 ntBASIC6.2□□□□□ -1.42
RB1P06400 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RB1P06400 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
RB1P06400 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RB1P06400 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.19□□□□□ -1.42
RB1P06400 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RB1P06400 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RB1P06400 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RB1P06400 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RB1P06400 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RB1P06400 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC6.19□□□□□ -1.42
RB1P06400 RNA5SP183-201ENST00000362452 119 ntBASIC6.19□□□□□ -1.42
RB1P06400 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC6.19□□□□□ -1.42
RB1P06400 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC6.19□□□□□ -1.42
RB1P06400 AL133173.1-201ENST00000423458 397 ntBASIC6.19□□□□□ -1.42
RB1P06400 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC6.19□□□□□ -1.42
RB1P06400 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.19□□□□□ -1.42
RB1P06400 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RB1P06400 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.19□□□□□ -1.42
RB1P06400 RANP1-206ENST00000455094 651 ntBASIC6.19□□□□□ -1.42
RB1P06400 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.19□□□□□ -1.42
RB1P06400 AC103563.5-201ENST00000455643 364 ntBASIC6.19□□□□□ -1.42
RB1P06400 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC6.19□□□□□ -1.42
RB1P06400 AC079841.1-201ENST00000481228 950 ntBASIC6.19□□□□□ -1.42
RB1P06400 AC016687.1-201ENST00000482574 353 ntBASIC6.19□□□□□ -1.42
RB1P06400 RN7SL570P-201ENST00000484405 292 ntBASIC6.19□□□□□ -1.42
RB1P06400 RPS21P4-201ENST00000487122 248 ntBASIC6.19□□□□□ -1.42
RB1P06400 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC6.19□□□□□ -1.42
RB1P06400 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RB1P06400 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC6.19□□□□□ -1.42
RB1P06400 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.19□□□□□ -1.42
RB1P06400 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC6.19□□□□□ -1.42
RB1P06400 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC6.19□□□□□ -1.42
RB1P06400 AC026616.1-201ENST00000523157 525 ntBASIC6.19□□□□□ -1.42
RB1P06400 AC096996.1-201ENST00000563813 325 ntBASIC6.19□□□□□ -1.42
RB1P06400 uc_338.26-201ENST00000612659 160 ntBASIC6.19□□□□□ -1.42
RB1P06400 AC007842.1-201ENST00000597336 2039 ntBASIC6.19□□□□□ -1.42
RB1P06400 AP000432.2-201ENST00000624164 2048 ntBASIC6.19□□□□□ -1.42
RB1P06400 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC6.19□□□□□ -1.42
RB1P06400 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RB1P06400 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RB1P06400 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
RB1P06400 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.19□□□□□ -1.42
RB1P06400 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
RB1P06400 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RB1P06400 MRE11P1-201ENST00000464884 2127 ntBASIC6.19□□□□□ -1.42
RB1P06400 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
RB1P06400 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RB1P06400 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
RB1P06400 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
RB1P06400 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RB1P06400 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RB1P06400 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RB1P06400 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RB1P06400 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RB1P06400 AL159987.1-201ENST00000347911 293 ntBASIC6.18□□□□□ -1.42
RB1P06400 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
RB1P06400 DHFRP5-201ENST00000406944 564 ntBASIC6.18□□□□□ -1.42
RB1P06400 RN7SKP125-201ENST00000410481 302 ntBASIC6.18□□□□□ -1.42
RB1P06400 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC6.18□□□□□ -1.42
RB1P06400 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.18□□□□□ -1.42
RB1P06400 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC6.18□□□□□ -1.42
RB1P06400 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC6.18□□□□□ -1.42
RB1P06400 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RB1P06400 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
RB1P06400 RPL32P33-201ENST00000487023 394 ntBASIC6.18□□□□□ -1.42
RB1P06400 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC6.18□□□□□ -1.42
RB1P06400 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.18□□□□□ -1.42
RB1P06400 AC074255.1-201ENST00000511259 501 ntBASIC6.18□□□□□ -1.42
RB1P06400 SNORA26.10-201ENST00000516427 141 ntBASIC6.18□□□□□ -1.42
RB1P06400 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.18□□□□□ -1.42
RB1P06400 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RB1P06400 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
RB1P06400 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.18□□□□□ -1.42
RB1P06400 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.18□□□□□ -1.42
RB1P06400 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC6.18□□□□□ -1.42
RB1P06400 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.18□□□□□ -1.42
RB1P06400 AC245128.3-201ENST00000594721 748 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms