Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
HLA-DQB2P05538 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
HLA-DQB2P05538 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HLA-DQB2P05538 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
HLA-DQB2P05538 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HLA-DQB2P05538 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.57□□□□□ -1.52
HLA-DQB2P05538 AC092681.1-201ENST00000297369 291 ntBASIC5.57□□□□□ -1.52
HLA-DQB2P05538 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.57□□□□□ -1.52
HLA-DQB2P05538 RNU4-2-201ENST00000365668 141 ntBASIC5.57□□□□□ -1.52
HLA-DQB2P05538 SNORA70.6-201ENST00000383934 134 ntBASIC5.57□□□□□ -1.52
HLA-DQB2P05538 MTND2P40-201ENST00000436718 841 ntBASIC5.57□□□□□ -1.52
HLA-DQB2P05538 AL359265.1-201ENST00000440296 795 ntBASIC5.57□□□□□ -1.52
HLA-DQB2P05538 CYCSP51-201ENST00000443545 318 ntBASIC5.57□□□□□ -1.52
HLA-DQB2P05538 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.57□□□□□ -1.52
HLA-DQB2P05538 RPS27AP2-201ENST00000457576 465 ntBASIC5.57□□□□□ -1.52
HLA-DQB2P05538 UGT2A3P7-201ENST00000510485 734 ntBASIC5.57□□□□□ -1.52
HLA-DQB2P05538 TMEM97P2-201ENST00000517841 403 ntBASIC5.57□□□□□ -1.52
HLA-DQB2P05538 AC079064.1-201ENST00000528365 362 ntBASIC5.57□□□□□ -1.52
HLA-DQB2P05538 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.57□□□□□ -1.52
HLA-DQB2P05538 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.57□□□□□ -1.52
HLA-DQB2P05538 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.57□□□□□ -1.52
HLA-DQB2P05538 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.57□□□□□ -1.52
HLA-DQB2P05538 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.57□□□□□ -1.52
HLA-DQB2P05538 AC007786.3-201ENST00000615154 596 ntBASIC5.57□□□□□ -1.52
HLA-DQB2P05538 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.57□□□□□ -1.52
HLA-DQB2P05538 AL357153.4-201ENST00000620487 1016 ntBASIC5.57□□□□□ -1.52
HLA-DQB2P05538 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.57□□□□□ -1.52
HLA-DQB2P05538 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
HLA-DQB2P05538 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.57□□□□□ -1.52
HLA-DQB2P05538 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HLA-DQB2P05538 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.57□□□□□ -1.52
HLA-DQB2P05538 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HLA-DQB2P05538 AL360270.2-201ENST00000562952 5985 ntBASIC5.57□□□□□ -1.52
HLA-DQB2P05538 AC093297.3-201ENST00000607056 2517 ntBASIC5.56□□□□□ -1.52
HLA-DQB2P05538 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
HLA-DQB2P05538 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DQB2P05538 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.56□□□□□ -1.52
HLA-DQB2P05538 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.56□□□□□ -1.52
HLA-DQB2P05538 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DQB2P05538 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.56□□□□□ -1.52
HLA-DQB2P05538 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.56□□□□□ -1.52
HLA-DQB2P05538 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DQB2P05538 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DQB2P05538 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
HLA-DQB2P05538 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DQB2P05538 PPIAP9-201ENST00000403866 498 ntBASIC5.56□□□□□ -1.52
HLA-DQB2P05538 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.56□□□□□ -1.52
HLA-DQB2P05538 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.56□□□□□ -1.52
HLA-DQB2P05538 AC012075.1-201ENST00000436549 580 ntBASIC5.56□□□□□ -1.52
HLA-DQB2P05538 RANP1-206ENST00000455094 651 ntBASIC5.56□□□□□ -1.52
HLA-DQB2P05538 SETP20-201ENST00000457046 852 ntBASIC5.56□□□□□ -1.52
HLA-DQB2P05538 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.56□□□□□ -1.52
HLA-DQB2P05538 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.56□□□□□ -1.52
HLA-DQB2P05538 OR11H3P-201ENST00000554547 982 ntBASIC5.56□□□□□ -1.52
HLA-DQB2P05538 AC022404.1-201ENST00000555320 273 ntBASIC5.56□□□□□ -1.52
HLA-DQB2P05538 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DQB2P05538 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.56□□□□□ -1.52
HLA-DQB2P05538 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.56□□□□□ -1.52
HLA-DQB2P05538 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.56□□□□□ -1.52
HLA-DQB2P05538 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DQB2P05538 AC135068.5-201ENST00000624197 983 ntBASIC5.56□□□□□ -1.52
HLA-DQB2P05538 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DQB2P05538 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DQB2P05538 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DQB2P05538 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DQB2P05538 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DQB2P05538 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DQB2P05538 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DQB2P05538 AL353796.1-201ENST00000561542 3241 ntBASIC5.55□□□□□ -1.52
HLA-DQB2P05538 AC016745.2-201ENST00000608834 3443 ntBASIC5.55□□□□□ -1.52
HLA-DQB2P05538 AC100757.1-201ENST00000616872 1835 ntBASIC5.55□□□□□ -1.52
HLA-DQB2P05538 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DQB2P05538 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DQB2P05538 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DQB2P05538 KARSP1-201ENST00000451871 1752 ntBASIC5.55□□□□□ -1.52
HLA-DQB2P05538 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DQB2P05538 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DQB2P05538 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.55□□□□□ -1.52
HLA-DQB2P05538 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DQB2P05538 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DQB2P05538 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HLA-DQB2P05538 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.55□□□□□ -1.52
HLA-DQB2P05538 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
HLA-DQB2P05538 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.55□□□□□ -1.52
HLA-DQB2P05538 RNA5SP178-201ENST00000410380 128 ntBASIC5.55□□□□□ -1.52
HLA-DQB2P05538 AL389925.1-201ENST00000432257 728 ntBASIC5.55□□□□□ -1.52
HLA-DQB2P05538 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.55□□□□□ -1.52
HLA-DQB2P05538 RPL12P11-201ENST00000439970 501 ntBASIC5.55□□□□□ -1.52
HLA-DQB2P05538 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.55□□□□□ -1.52
HLA-DQB2P05538 PSAT1P4-201ENST00000466500 526 ntBASIC5.55□□□□□ -1.52
HLA-DQB2P05538 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.55□□□□□ -1.52
HLA-DQB2P05538 MTND6P2-201ENST00000512226 524 ntBASIC5.55□□□□□ -1.52
HLA-DQB2P05538 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.55□□□□□ -1.52
HLA-DQB2P05538 SEPT10P1-201ENST00000517342 1162 ntBASIC5.55□□□□□ -1.52
HLA-DQB2P05538 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.55□□□□□ -1.52
HLA-DQB2P05538 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.55□□□□□ -1.52
HLA-DQB2P05538 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.55□□□□□ -1.52
HLA-DQB2P05538 OR8G3P-201ENST00000533406 921 ntBASIC5.55□□□□□ -1.52
HLA-DQB2P05538 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.55□□□□□ -1.52
HLA-DQB2P05538 MIR4310-201ENST00000582950 57 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms